Pseudomonas hydrolytica: NLY38_24175
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Entry
NLY38_24175 CDS
T08519
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
phf
Pseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phf03016
]
NLY38_24175 (rph)
Enzymes [BR:
phf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
NLY38_24175 (rph)
Transfer RNA biogenesis [BR:
phf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NLY38_24175 (rph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
UTH31492
LinkDB
All DBs
Position
complement(5137546..5138265)
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AA seq
239 aa
AA seq
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MKRPSGRAADQLRPIRITRNYTKHAEGSVLVEFGDTKVICTVSVETGVPRFLKGQGQGWL
TAEYGMLPRATGERNQREASRGKQGGRTLEIQRLIGRSLRAALDMTKLGENTLYVDCDVI
QADGGTRTASITGAMVALIDALKVLKKRGALKGEPLKQMIAAVSVGIYQGEPVLDLDYLE
DSAAETDLNVVMTNAGGFIEVQGTAEGAPFQPDEFNAMLALAQKGMNEIFELQQAALAD
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcccagtggccgcgccgccgatcagttgcgcccgatccgcatcactcgcaac
tacaccaagcacgccgagggttcggtactggtcgagttcggcgataccaaggtgatctgc
accgtcagcgtcgagaccggtgtgccgcgctttctcaagggccagggccagggttggctg
accgccgagtacggcatgctgccgcgcgccaccggcgagcgtaaccagcgcgaggccagc
cgtggcaagcagggcggtcgtaccctggagatccagcgtctgatcggccgttcgctgcgc
gctgcactggacatgaccaagctgggcgagaacaccctgtacgtcgactgcgacgtgatc
caggccgatggcggcacccgtaccgcctccatcaccggcgccatggtggcactgatcgac
gcgctgaaggtgctgaagaagcgtggcgcgctcaagggcgagccgctcaagcagatgatc
gccgcggtatcggtcggcatctatcagggcgagccggtgctggatctggattacctggaa
gactccgccgccgagaccgacctcaacgtggtcatgaccaacgccggcggtttcatcgaa
gtgcagggcaccgccgaaggcgcgccgttccagcccgacgagttcaacgccatgctggcg
ttggcgcagaagggcatgaacgagattttcgagctgcagcaggccgctctggccgactga
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