Polaribacter huanghezhanensis: KCTC32516_01603
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Entry
KCTC32516_01603 CDS
T09192
Symbol
uvrA_1
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
phg
Polaribacter huanghezhanensis
Pathway
phg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KCTC32516_01603 (uvrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phg03400
]
KCTC32516_01603 (uvrA_1)
DNA repair and recombination proteins [BR:
phg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KCTC32516_01603 (uvrA_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KCTC32516_01603 (uvrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_22
nSTAND3
DnaJ_CXXCXGXG
AAA_21
TSP_NTD
Viral_helicase1
AAA_18
T2SSE
AAA_24
cobW
AAA_25
MeaB
Stn1_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WKD86242
LinkDB
All DBs
Position
complement(1689577..1692399)
Genome browser
AA seq
940 aa
AA seq
DB search
MKQQEYIEVFGARVHNLKNIDVKIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIETF
SAYARQFLGGLERPDVDKIDGLSPVISIEQKTTNKSPRSTVGTITEIYDFLRLLFARAAD
AYSYNTDEKMVSYSDEKIKELILTDFQDKKIAVLAPLVKSRKGHYRELFQQISKQGFVKV
RVDGEIIEITKGMRLDRYKTHDIEVVIDRIAVNNSVEKRLEETIKTALYTGDNILMVIDL
ETNNPRYFSRDLMCPTTGIAYPNPEPNTFSFNSPKGACASCNGLGITNEVNLNKVIPDEA
ISIKNGGIIPLGEQKNSWIFKQLELIAERYNFKLNDPISKIPKEAIDIILNGGNEKFNIE
SKSIGITRNYEIDFEGIISFINSQYKNSESTSIKRWAKDFMDEVSCSTCNGNRLKKEALY
FKILDKNISDLAKMDITELANWFDKIDNKISKRQLTIAEEILKEIRTRIQFLLDVGLDYL
NLDRTSKSLSGGETQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNQKLIDSLIKLRDIG
NSVLVVEHDKDMIEAADFVFDIGPGAGRHGGEIVSEGTFEELKKHDTLTADYITGKRVIA
VPKKRRKGNGKKIQLKGATGNNLKNVSVEFPLGKMICVTGVSGSGKSTLINETLYPILNA
HIYRGVKKPMPYKSIKGLEHIDKVIDIDQSPIGRTPRSNPATYTGTFGEIRSLFARTPEA
AIRGYKPGRFSFNVTGGRCETCQGGGVRVIEMNFLPDVHVECETCQGKRFNRETLEIRYK
GKSISDILGMTIDDAVVFFEKVPKIHRKIKTIKDVGLGYITLGQQSTTLSGGEAQRIKLA
SELSKRDTGNTFYILDEPTTGLHFEDIRVLMDVLNKLADKGNTVLIIEHNLDVIKLADYI
IDIGMEGGKKGGEVLCFGTPEEVAKHKTSYTAKFLKKEVS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacaacaagaatatatagaagtttttggcgctagagttcataatttaaaaaatatt
gatgtaaaaattccacgcgaaaaactagttgttattactggtttaagcggaagcggaaaa
tcttcgttggcttttgatactatttatgcagaaggacaaagacgttatattgaaacattt
tctgcctacgcaagacaatttttaggcggattagaacgccctgatgttgataaaattgac
ggactttctccggtgatttctatcgagcaaaaaaccaccaacaagagtccgcgctctact
gttggaacgattacagaaatctacgattttttaagattgctttttgccagagctgctgat
gcgtattcttataatacggatgaaaaaatggtcagttattcggatgaaaaaatcaaagaa
ttaattcttaccgattttcaagataaaaaaattgctgttttagcaccgcttgtaaagtct
agaaaaggacattacagagaattatttcagcaaatttctaaacagggttttgtgaaagtc
cgtgttgatggagaaattattgagataacaaaaggaatgcgtttagacagatacaaaacg
cacgatatagaagttgtaattgacagaattgcagtcaataattccgtagaaaaaagacta
gaagaaacgataaaaacggctttatatactggcgataatattttaatggtgattgattta
gaaaccaataacccaagatattttagtagagatttaatgtgtccaacaaccggaattgca
tatccaaatccagaaccaaataccttttcttttaattcacctaaaggtgcttgtgcatct
tgcaacggattgggaatcaccaatgaagtgaacttgaataaagtaattcctgatgaagct
atttctataaaaaatggcggaattattcctttaggagaacaaaaaaatagctggattttt
aaacaactagaattaattgcagaacgctacaattttaaattaaacgatccaattagtaaa
atccccaaagaagcaattgatattattttaaatggcggaaacgaaaaatttaatatagaa
tctaaatcaattggcatcactagaaattacgaaattgattttgaaggcattatttcattt
atcaacagtcagtataaaaacagtgaatctacttctataaaaagatgggcaaaagatttt
atggacgaagtttcgtgttctacgtgtaacggaaatcgccttaaaaaagaagccttatat
tttaaaattctcgataaaaatattagcgatttagcgaagatggacatcaccgaattggca
aattggtttgataaaatcgataataaaatctctaaaaggcagttaacaattgccgaagaa
attttaaaagaaattagaactcgaattcagtttttacttgatgttggtttagattattta
aacttagacagaacttcaaaatcgttgtctggcggagaaacgcaacgcatcagattggca
acacaaatcggttctcaactagttggtgtgttgtatattttagacgaaccgagtattggc
ttgcaccaaagagacaatcaaaaattaattgattctttaataaaattacgagatattggc
aattcggtgttggttgtagaacatgacaaagacatgattgaagcagcagattttgtgttt
gacattggtcctggagctggaagacatggcggagaaattgtaagcgaaggaacttttgaa
gaattaaaaaaacacgatacgttaactgcggattatatcacaggaaaaagagtgattgcc
gttcctaaaaaaagaagaaaaggaaacggaaaaaaaattcaattaaaaggcgcaaccgga
aataatttaaaaaacgtttcggtagagttccctttaggaaaaatgatttgcgttaccgga
gtttctggaagcggaaaatctaccttaatcaacgaaacgttgtatccaatcttaaacgca
catatttatcgtggcgttaaaaaaccaatgccgtataaaagcatcaaaggtttagaacat
attgataaagtaatagatattgatcaatctccaatcggaagaactcctcgttcaaatcct
gcaacttacacaggaacttttggagaaattagaagtttatttgcacgcacaccagaagct
gcaattcgtggttacaaacccggtagattttcttttaatgttactggcggaagatgtgaa
acgtgtcaaggtggcggagttcgagttattgaaatgaattttttaccagacgttcatgta
gaatgtgaaacctgtcaaggaaaacgttttaacagagaaaccttagagattcggtacaaa
ggaaaatcaatttcagatattttaggaatgaccattgatgacgcagttgtcttttttgaa
aaagttcctaaaatccaccgtaaaattaaaactatcaaagatgttggcttaggatatatt
acgttaggacaacaatcaacaacactctctggtggagaagcacaacgaataaaattagcg
tcagaattatctaaaagagataccggaaatactttttacattctagacgaaccaaccact
ggtttacattttgaagacattagggtgttaatggatgtgttaaacaagttggcagataaa
ggaaatactgttttaattatagaacacaatttagatgttataaaattggcagattatatt
attgatattggtatggaaggcggaaaaaaaggcggagaagttttatgtttcggaactcca
gaagaagttgcaaaacataaaaccagttatactgctaagtttttgaaaaaagaagtatct
tag
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