Pseudopodoces humilis (Tibetan ground-tit): 102100661
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Entry
102100661 CDS
T02921
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102100661 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phi03036
]
102100661 (ERCC6)
03400 DNA repair and recombination proteins [BR:
phi03400
]
102100661 (ERCC6)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102100661 (ERCC6)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
102100661 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
TFIIF_beta
C6
Motif
Other DBs
NCBI-GeneID:
102100661
NCBI-ProteinID:
XP_005520649
LinkDB
All DBs
Position
Unknown
AA seq
1502 aa
AA seq
DB search
MIMCFFFVAFEQRMPTHKSHLPDGIQEQESATTSSNDCLHNDEDLGTEQENGICDNGVGN
SIGIPNSDCQASTSMAVPLEVPRRGHPLLQINRQQIQSVSCSAHAAELKDLGVDVYDQDV
LEQGVLQQVDNAINEANKAAKIANASKEYESVLEDLRSCTTSLRHINKIIEELSPQAADN
KNINRKLDSVKRQKYNKEQQLKKIKAKQKCLQGILGLTEFADEASEIEYEEDEEPGPSSL
GSMLMPAQETEWAELIRTGQMTPFGTKIPQKPERKARQLRLNEASDFEKYLADQAKLSSE
RRKLSRHKGAKKKAQAKNVQCVTPAAATKEKSGKALSKTDKRLKKHLRELQKHALQIHSK
ARIPKEKKCLEAKKFRHEQEDDSGESEYVPDEELFDPEAAEEEEEQASSLAENDSDYELK
SLSRKRKHLVKKGFKEAENDADFVPSSEEEENTPGKHKVRRWRDDGDVDYYKQRLRKWQN
ERLKDKEHQTAEELSEESDVEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILG
DEMGLGKTIQIIAFLAGLSYSNMRTRGSNYRYQGLGPTVIVCPATVLHQWVKEFHTWWPP
FRVAVLHETGSYTKSKVKLIHEIASCHGILITSYSYIRLMQDNIHTYDWHYVILDEGHKI
RNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFIFPGKLGTLPVFMEQFSVPI
TMGGYCNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTEE
QLQIYQNYINSKEVYQILNGDMQILLGLSTLRKICNHPDFVADSPRILKSVPDAEAEDPN
QFGYWKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMMQILEVFVRYRNYSYLRMDGTTA
VASRQPLVAKYNEDKSIFLFLLTTRVGGIGVNLVGADRVIIYDPDWNPSVDTQARERAWR
IGQKREVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQNRFFKSNDLYELFTLNSP
DVSQGTETSAIFAGTGSDVQVPKPPDNGTSKRDVHLAESSSHKKIKSSNSYSTTHVKDSS
CKAVETSEETKGNLEAFDQNSCTKDNAQAATDINSFNESKEECLESDDKCMSQSMPCNAG
SSEDAECLTAVVAGEGCGAANADARTHLSLTCDAAGSWEKQDAKTEDGQFDNNHFKCISK
TKHRVDMLSHDSHKDKSKKKHHKDAKFEGKRIPHLVKQKQYRRENSEEQDSKKNDDYVLQ
KLFKKSGVHSVMKHDAIMDASSADHVLEEAEASRVAQDALRALRLSRQQCLGAASGVPTW
TGMSGLSGAPSGIKSRFGQKRNSMLLSSHSTCASPAKKQKDGDITKKQNIKKCSSSEHFN
GKSGESSSSALDSSSLLARMRARNHLVLPQQTRNEGDENHQPAPAPVQGSTEYDELLVDL
RNFLAFQARVDGEASTRELLQEFESKLPAEHSCVFRELLRNICTFHRSPNGEGVWRLKPE
FR
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgataatgtgcttcttctttgttgcttttgagcagaggatgccaacacacaagagtcac
ctgccagatggtatccaagagcaagagtctgccactacttcaagcaatgattgcctgcat
aatgatgaggacttgggaactgaacaggaaaatggcatttgtgacaatggtgtgggtaat
agtatcggaattcccaactctgactgccaggcttccacttctatggctgttcctttggag
gtgcccagaagaggacatccccttttacagatcaacaggcagcagattcagtctgtctca
tgtagtgcacatgctgctgagctcaaagatttaggagttgatgtctatgaccaggacgtg
ttggagcaaggagttcttcagcaagtagataatgcaattaatgaagcaaataaagcagca
aaaatagctaatgcatcaaaagagtatgagtcagtactggaggatttaagatcatgtaca
acatctctgagacatataaataaaattattgaggaactttcacctcaagctgctgacaac
aaaaatattaacagaaaactagattctgtaaaacggcaaaaatataacaaggaacaacag
ctgaagaagataaaagcaaaacaaaaatgtcttcaaggaatactcggtttaacagagttt
gctgatgaagcaagtgagattgaatatgaggaagatgaagagcctggtccatcatccctt
ggcagtatgcttatgcctgctcaggaaacggagtgggcagagctcattcgaactggtcag
atgactccttttggaactaaaatacctcagaagccagagaggaaggcacgacagttaaga
ttaaatgaagcatctgattttgagaagtacttagcagaccaagctaagctgtcatctgaa
agaaggaagttatcccgtcacaaaggagcaaagaagaaagcacaagccaaaaatgttcag
tgtgtgactcctgcagctgccacaaaggaaaaaagtggtaaagccctgtcaaaaacagat
aaacgcttaaaaaaacacttgagagagcttcagaagcatgcccttcagattcattcaaag
gccaggattccaaaggaaaagaaatgtcttgaggccaagaagttcaggcatgaacaagag
gatgatagtggggagtctgagtatgtacctgatgaggagctctttgatccagaagcagca
gaagaggaagaagaacaggcatcttctcttgctgagaatgattctgattatgaacttaag
agtttatcaagaaaaagaaaacatttggtgaagaagggttttaaagaagctgaaaatgat
gctgactttgttccaagctcagaggaagaagagaatacaccagggaagcataaagtgaga
cgatggagagatgatggagatgtggactattataaacagagactaaggaagtggcaaaat
gaacgtttgaaggataaagaacatcaaacagctgaggaactttctgaagaaagtgatgtt
gaatttgaagagggtttcaaagtaccgggatttctcttcaaaaagctttttaagtaccag
cagacaggtgttaggtggctttgggaattgcactgccagcaggcaggaggaattctggga
gatgagatgggattgggcaagaccattcagataattgccttcttggcaggtctgagctac
agcaatatgaggactcgtggttcaaattacagataccagggattgggtccaacagtgatt
gtttgtccagctactgtgttgcatcagtgggtaaaagaattccacacttggtggcctcca
tttagagttgctgtgctccatgaaactggttcttatacaaagagtaaggtgaaactaatt
catgaaattgcttcatgccatggaattttaattacgtcttactcgtacattcgactgatg
caggacaacatccacacgtatgattggcattatgtcattctggatgagggtcacaaaatc
cgaaatccaaatgctgcagtcacacttgcatgcaagcagttccgcacaccccatcgaatc
atcttgtctggctcccctatgcaaaataacctaaaggagctctggtccctctttgacttt
atattcccaggaaaactggggacactacctgtcttcatggagcagttttcggtcccaata
accatgggaggatattgcaatgcctctcctgtccaggtaaaaactgcatacaaatgtgcc
tgtgtgttacgggacaccataaacccctacttgctgcgaagaatgaaggctgatgtaaaa
atgagcctttcacttccagataaaaatgaacaggtcctcttttgccgtttgacagaggag
cagcttcaaatctatcaaaattacatcaactctaaagaagtttaccagattctcaatgga
gacatgcagattctcttgggactatcaactttgagaaagatttgcaatcaccctgacttc
gttgctgatagccccagaattttgaagagtgtgccagatgctgaagcagaggatccaaat
cagtttggatattggaaacgttctggaaaaatgatagtggtagaatccttactgaaaata
tggcacaagcaaggtcacagagtgctgttttttactcagtcgagacagatgatgcagata
cttgaagtctttgtgagatacagaaactattcctacctcaggatggatggcaccacagca
gtagcttccagacagcctcttgtagcaaaatacaatgaggacaaatccatatttcttttt
cttctaacaactcgtgttggtggcattggagttaacttggttggtgctgaccgggttatt
atttatgatcctgactggaatcccagtgtggacacacaggctcgggaacgtgcttggaga
ataggccaaaagagagaggtgactgtgtataggctgctcactgcaggtactattgaggag
aagatataccacagacaaatcttcaaacagtttttaacaaacagagtgctgaaagaccct
aagcagaatcgtttcttcaaatccaatgacctttatgaactatttactctgaacagtcca
gatgtgtctcaggggacagaaacaagtgcaatttttgcaggtactggttcagatgttcaa
gtcccaaagccacctgataatggcacttctaaacgtgatgtccatcttgcagaaagcagc
tcacacaagaaaatcaagtcgtccaattcctattccaccacacacgtgaaagattcttct
tgtaaagcagtagagacaagtgaggaaaccaagggaaatttggaagcctttgaccaaaat
agctgcacaaaagataatgcacaagctgctactgatataaattcattcaatgaaagcaag
gaggagtgtttggaaagtgatgacaaatgcatgtcccagtcgatgccatgcaatgcaggg
tcttcagaggatgcggaatgtctgactgctgtggtggctggtgaaggatgtggagcagct
aatgcagatgccaggacacatcttagccttacttgtgatgcagctggctcttgggaaaag
caggatgctaaaactgaagatgggcaatttgataataatcattttaagtgtatttcaaaa
acaaagcacagggtggacatgctgtcgcatgacagccacaaagataagtctaagaagaaa
catcacaaagatgccaaatttgaaggaaagcgcattcctcatctagtgaaacaaaagcag
tacagaagggagaacagtgaagagcaagattcaaagaaaaatgatgactatgtcttgcag
aaacttttcaaaaaatcaggggtacacagtgttatgaagcatgatgctattatggatgct
tccagtgcagatcatgtgctggaggaagcagaagcgagcagagtggcccaggacgccttg
agagccttaagactctctcgtcagcaatgtttaggagctgcttctggtgtgccaacctgg
acaggcatgagtggtctttcaggtgcaccatcaggaataaagagtcggtttggtcaaaaa
agaaactccatgctgctttcttcacattccacttgtgcatcacctgcaaagaagcaaaag
gatggagatataacaaagaaacaaaatataaagaagtgtagttccagtgagcacttcaat
ggaaaatctggagaatcgtcatccagtgctctggactcttcatctttattagctcggatg
agggcaagaaaccacctcgttttaccacaacagacaaggaatgagggtgatgagaatcat
cagccagcacccgccccagtgcagggttcgacagaatacgatgaactgcttgtggatctg
cggaacttcctggcattccaggcccgcgtggacggcgaggccagcactcgggaactgctg
caggaatttgagtccaaactgcctgcagagcactcctgtgtctttagagaactgctccgc
aatatctgcactttccataggagcccaaacggggaaggggtctggaggctaaagccagaa
ttccgatga
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integrated database retrieval system
