Pseudopodoces humilis (Tibetan ground-tit): 102102025
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Entry
102102025 CDS
T02921
Symbol
BPTF
Name
(RefSeq) nucleosome-remodeling factor subunit BPTF isoform X1
KO
K11728
nucleosome-remodeling factor subunit BPTF
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102102025 (BPTF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phi03036
]
102102025 (BPTF)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
102102025 (BPTF)
NuRF complex (fruit fly)
102102025 (BPTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
Bromodomain
DDT
WSD
WHIM1
PHD_5
Motif
Other DBs
NCBI-GeneID:
102102025
NCBI-ProteinID:
XP_014111221
LinkDB
All DBs
Position
Unknown
AA seq
2881 aa
AA seq
DB search
MVSEEEEEEGDPEDNQDSEEEEEEEIMEEEDDDDSDYPEEMEDEDDASYCTESSFRSHST
YSSTPGRRRQRAHRPRSPILEEKDIPPLEFPKSSEDLMVPSEHIMNVIAIYEVLRNFGTV
LRLSPFRFEDFCAALVSQEQCTLMAEMHIVLLKAVLREEDTSNTTFGPADLKDSVNSTLY
FIDGMTWPEVLRVYCESDKEYHHVLPYQETEDYPYGPVENKIKVLQFLVDQFLTTNIARE
ELMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKV
PGVTDCVAEIQKNKPYIRHEPIGYDRHRRKYWFLNRRIIIEEDSESEKDKKIWYYSTKIQ
LAELIECLDKDYWEADLCKTLDEMREEIHRHMDVTEDLTNKARGNNKSFLSAANDEILDI
IRARKGEIVEDKNTGDEEAEKAKSDVDNDQTDAERDKEESGDQDKIEETQSEQDVEKEKT
EEATVVGDKSNSVTSSTDDNTTNPSAGENSCSEGKDAVGCQSETLDSNNVAEKKVASELP
LELSEETGQMIPSSGSAAPPQADVENSSGSELGSGQNDSIKTLDDAENAEKGSQASEDIG
EKSNGDRSDSPGAGKGTPGSTRMLTRLRNPDSKLSQMKSQQVAAAANEANKLYKETREVL
VVNSQGEVSRVNTKKDIVIKGNINNYFKLGQEGKYRVYHNQYATNSFALNKHQHREDHDK
RRHLSHKFCLTPAGEFKWNGSVHGSKVLTISTLRLTIIQLENNIPASFLHPNWASHRSNW
IKAVQMCSKPREFALALAILECAIKPVVMLPIWRESLGHTRLRRMTAIEREEKEKVKKKE
RKQEEEETMQQATWVKYTFPVKHQVWKQKGEEYRVTGYGGWSWISKTHVHRFMPKLPGNT
NANYRKLLSTKSEDEKCNLDKRKGAPKVKTEKDRAKDSRDPQAKDKADVSETLEKIEVKE
EKLHEDKLEVDTISENSDHAKNTVEKGIDGENDKVIKEEPMDVDDVKIESSIKDEESHCK
RDIINVSEGFHLRTCYKRKVKSSKLDGLLERRIKQFTLEEKQRLEKIKLEAGAKTGGIQS
LSPQKNTDELQTRKGKEGSQFDSSSQDQSCISGKTQAKDMEQDCLPISSISCTKTGDEDG
PSLPLSNRLSKEGQLLDEDFRQSSEGDSFVQNDGRENNPEPSTADKCQGQEALGESESSL
VDGLKQTSAEGRTKWDVSEINEKPLKQKLPITRVSQRELENLGPVVPESSCRRDAVATLE
KPDSEGNSEQQSKDAENNCMIKSHMETMSSQESEMEEEISPVKTESKSEKIIFHQKSANK
DLESFKTGLISERNLESQSLEHMDGEDDNEDLLSSKLTEANGQKKGQELKVETGTMNKYL
DQTNVNTVTDKKNNKDEETETEKEKSSFQMNGKDSDIKALSNDGCLVKNTCEAKAGGDIE
PKVNNFNKSIPEHEIKPLTFKESSVKPFMNGDIMGEDTKDKNIVDSKSRLQSSPESESGE
GLQALDEVSKYVQKTEENQLFPERSASVGSASPPTQPVCKENNLNSETESMETEAIEEKK
FAPSPVTSCEESSLRCHFADQNGVQTYKMENINGESKIKTVITEVTTTTSTVSTESKTVY
KVAESGAASNEKTTVVSSTENCAISTVTTTTTVTKLTTPATDTNSDVISVQEHSKTVVTT
TVTDSLTTPEGTLVTSMTVSKEYSTKDKVKLMKFARPKKTRSGTALPSYRKFVTKSSKKS
IFVLPNDDLKKLARRGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVKSLAG
VSLMLRLLWACLKWDDMAAKAPPGGGTTRTETTETEITTTEIIKRRDVGPYGIRSEYCIR
KIICPIGVPEAPKETPTPQRKGLRSSALRPKRPETPKQTGPVIMETWVAEEELELWEIRA
FAERVEKEKAQAVEQQAKVSEQKKAEEFKAQLEAQLKHQRLAAQQKRLEQQKQIPAGGVV
PAATTASSTATTVSTPQKVVVGPLTGPVPTGTKVVLTTKVGSPATVTFQQNKNFHQTFAT
WVKQGQSSTATSTAATSATTIASTGQTFQLSGSPVTMAGKVITKLPLPANSKIVAVNVPS
TQGGVVQVQQKVLGIIPSTTGASQTFTSFQPRTATVTIRPNTTGTLGTTSTSQVVQGTPL
RPGMTVIRTPLQQSTLGKTIIRTPVVVQQGQTQQVVTQIIRGQPVSTAVSSTSTASSSTG
QKTITSSGTAPQQVQPQTPAPPPRPQQGQVKLTMAQLTQLTQGQGGSQGLTVVIQGQGQT
TGQLQLIPQGVTVIPGPGQQLMQAAMPNGTIQRFLFTPLPAAATTASTTTTTVSTSTSAA
GEAKAALQAPPAPAVPAGQGQPGSAVAQPAGAQPQGAQPDAPSQPEAPADSTAPSEAQPS
KSPAQSPAQAPGLSPAPGPMQPLPAGLPPGQAQAQHPAQVIMKQNAVIEHLKQKKTLTPA
EREENQRMIVCNQVMKYILDKIDKEEKQAAKKRKREESVEQKRSKQNATKLSALLFKHKE
QLKAEILKKRALLDKDLQIEVQEELKKDLAKIKKEKERAQAAAAAAAAAAAAAAAAAPPP
PPPVPPAPPQLPAASVTSSSSTTVPVPVSSQKRKREEEKDSSASKSKKKKMISTTSKETK
KDTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMDVYICNECKRAQEGSS
EELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEADLIDEYVCPQCQSTEDAMTVL
SPLTDKDYEGLRRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERILKRY
YKKVTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFKASRSHNNKLQSTA
S
NT seq
8646 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgaggaggaggaggaggagggagaccccgaggataaccaggactccgaggaa
gaagaggaggaggagataatggaggaggaggacgacgacgactctgactaccccgaagag
atggaggatgaagacgatgccagttattgcactgagagcagcttcaggagccacagcacc
tacagcagcaccccaggtaggagaagacaaagagcacatcgtcctcgttctccaatatta
gaagaaaaagatatcccacccttggagtttcctaaatcctcagaggacttaatggtgcct
agtgagcatataatgaatgttattgccatctatgaggtactaaggaactttggcactgtt
ttgcgcctctctccttttcgttttgaggacttctgtgctgctctggtaagtcaagagcag
tgcacacttatggcagagatgcatatagtgctgttaaaagcagttttacgtgaagaagac
acttcaaatactacctttggacctgctgacctcaaagatagcgttaattccactttgtat
ttcatagatggaatgacgtggccagaggttctgcgggtatattgtgagagtgacaaggaa
taccatcatgttcttccttaccaagagacagaggactatccttatggaccagtagagaat
aaaatcaaagttctgcagttcttagtggatcagtttcttaccacaaacattgcacgtgag
gagttaatgtcagaaggtgttattcagtatgatgatcattgtagggtttgtcacaaactt
ggggatttgctttgctgtgagacttgctcggccgtgtaccacttggagtgcgtgaaaccc
cctctggaggaggtgcccgaagacgagtggcagtgtgaggtctgtgtggcacataaggta
cctggagtgactgactgtgtggctgaaatccaaaaaaacaagccatatatccgacacgaa
cctattggatacgacaggcataggcggaaatactggttcctgaacaggagaatcatcata
gaggaagattcagaaagtgagaaggataagaaaatctggtactacagcacaaagatccag
ctggcagagttaattgaatgcctggacaaggattactgggaagctgacctatgcaaaacc
ctggacgagatgcgtgaagaaattcatcggcacatggatgtgacagaagaccttacaaac
aaagcaaggggcaacaacaagtctttcctttctgcagcaaatgatgaaattttggacatt
atcagagcaagaaaaggagaaatagtggaagataaaaacacaggagatgaggaagcagaa
aaggccaaaagtgatgttgataatgaccagacagatgctgagagagacaaggaagaatct
ggagaccaggataaaattgaggaaacacaaagtgaacaagacgtggaaaaagagaaaaca
gaagaggcaacagtcgttggggataaaagtaactctgtgacctcaagcactgatgacaac
accacaaatccttctgcaggagagaatagttgctctgaagggaaggacgcagtggggtgt
cagtcagaaacccttgatagcaacaacgtggcagagaagaaggtggcatcagagctccct
ctggaactctcagaagaaactggtcagatgatccccagcagtggctctgctgcacctcca
caggcagatgttgagaacagcagtggcagtgagctgggctctggccagaacgattccatt
aaaactcttgatgatgctgaaaatgcagagaagggatcccaggcttcagaggacatagga
gagaaatccaatggtgacagaagtgattctccaggtgcagggaagggcacaccaggctcg
acgcgaatgctcaccagattgagaaatccagatagcaaactgagccagatgaaaagtcag
caggttgctgctgcagcaaatgaagcaaataagttatataaagaaaccagagaggttctg
gtggtcaactctcaaggtgaagtctcccgagtgaacaccaagaaggacattgtgattaag
ggaaatatcaacaattatttcaaactggggcaggaggggaagtaccgtgtttatcacaat
caatatgccaccaattccttcgctttgaacaagcaccagcacagggaggaccacgacaag
aggcgacatctctcacataaattctgcctgactccagctggagagttcaagtggaacggg
tctgtacatggctccaaagttctcaccatatccaccctgaggctgaccattattcagcta
gaaaacaatatcccagcatcgttccttcaccctaactgggcttcccacaggtctaactgg
attaaggctgttcagatgtgcagcaaacccagagaatttgcactagcactggctatattg
gagtgtgcaatcaaaccagttgtcatgcttcccatctggcgggaatccttggggcatacg
agattacgcagaatgacagcgatagaaagagaagaaaaggagaaagtgaaaaaaaaagag
agaaaacaagaagaagaagaaacaatgcagcaagctacatgggtgaaatacacatttcct
gtcaaacaccaggtttggaagcaaaaaggagaggaatatagagtaacaggatatggcggt
tggagctggattagtaaaacccatgtccacaggtttatgcccaaactaccaggaaatact
aatgcaaattacagaaaattactatcaacaaagagtgaagatgaaaaatgcaacttggat
aaacgaaaaggtgcacctaaggtaaaaacagagaaagacagagcaaaggattctcgagat
ccgcaagcaaaagacaaagcagatgtttcagaaaccttggagaaaatagaagtaaaagaa
gaaaagttgcatgaagacaaattggaagttgacacaatttctgaaaactcagatcatgca
aaaaatacagtggaaaaaggcatcgatggtgaaaatgataaagtcatcaaggaagaacct
atggatgtggatgatgtgaaaattgagtcctccataaaagatgaggaaagtcattgtaag
cgggatataatcaatgtcagtgagggatttcatttaaggacttgctacaaaaggaaagta
aaatcatcaaaattagatggactcctggagcggcgaataaaacagtttacactggaagaa
aaacagcgtctagaaaagattaagctggaggctggtgctaaaactgggggcattcaatct
ctgagcccccagaaaaacacagatgagctccaaacgaggaaaggaaaagaaggaagccag
tttgactcttcttcccaagatcaaagctgcatttcaggcaagacccaagccaaagatatg
gagcaggactgtttgcccatcagcagtatctcctgtaccaaaactggggatgaagatgga
ccttctttgcctttgtcaaacaggctctcaaaagaggggcagctgctggatgaagacttc
cgtcagtcctctgaaggagacagctttgttcagaatgatggcagagaaaacaaccctgaa
ccttcgactgctgataagtgtcaaggacaagaggctcttggagagtctgagagctcttta
gtggatggcttgaaacaaaccagtgcagaaggccgaaccaaatgggatgtttcagaaata
aatgaaaaacccttgaaacaaaagctacctattaccagagtgtctcagcgagaacttgaa
aacttagggccagtggtacctgaaagcagctgtagaagagatgctgtggccactcttgaa
aaaccagactcagaagggaattctgaacagcaaagcaaagatgcagaaaacaattgtatg
ataaaaagccatatggaaaccatgtcctctcaagaaagtgaaatggaggaagaaatttct
cctgtaaagactgaaagtaaatctgaaaagattatatttcaccaaaaatcagctaataaa
gatctagaatcatttaaaactgggctgatttctgaaagaaaccttgaaagtcaatctctg
gagcacatggatggggaagatgataatgaggatttactgagctctaaactaacagaggct
aatggtcaaaagaaaggtcaggaactgaaagtggagacaggtaccatgaacaaatatctt
gatcagacaaatgtaaatactgttactgacaaaaagaataataaagatgaagaaactgag
acagaaaaagaaaaatcatcatttcaaatgaatggaaaagacagtgacattaaagcattg
tcaaatgatggctgcttagtgaaaaatacctgtgaagcaaaggcaggaggtgatatcgaa
ccaaaagtaaataattttaataaatccattccagaacatgaaataaaaccattgactttt
aaggaatcttctgtaaaaccattcatgaatggtgacatcatgggagaggacacaaaagat
aaaaatatcgtggactcaaagtcacgactgcagagttcacctgagtctgagtctggagag
ggtcttcaggcactagacgaagtttccaagtatgtgcagaaaactgaagaaaatcagctt
tttcctgagagatctgccagtgttggctctgcttccccaccaacacagcctgtctgtaaa
gaaaataacctgaacagtgaaacagaatctatggaaactgaagcaattgaggagaagaaa
tttgctccatcgcctgtaacctcatgtgaggaatccagcttgcgctgtcactttgctgac
cagaatggggtacagacatataaaatggaaaatattaatggagaaagtaaaataaaaact
gttattactgaagtgactaccacaacctcaactgtgtccacagagtccaaaacggtgtac
aaggttgcagagtctggagctgccagcaatgagaaaaccacagttgtttcctccacagaa
aactgtgccatctccactgtcaccactaccaccactgtgaccaagctcaccactccagcc
acagacactaactctgatgtcatctctgtccaggagcacagtaaaacagtggttacaaca
acagtcaccgattcactgaccaccccagaaggcacattggtgacttctatgactgtcagc
aaagaatattccacaaaagacaaagtgaagttaatgaaatttgcaagacccaaaaaaact
cgttctggaactgccttaccatcttataggaaatttgttacgaaaagcagtaagaaaagc
atatttgttttacccaatgatgacttaaaaaagctggccaggagaggagggatcagagag
gttccttatttcaattacaatgcaaagcctgccttggatatctggccttatccatcccca
agaccaacttttgggatcacttggaggtaccgactccaaacagtcaaatcattggctgga
gtgagcctgatgctgaggttattgtgggcatgtctcaaatgggatgatatggcagcaaaa
gctccacccgggggaggaaccacaagaacagaaacaactgaaactgaaattacaacaacg
gaaataatcaagcggagagatgttggtccgtatgggatacggtcagagtactgtataaga
aaaatcatatgtcccattggtgtaccagaggctccaaaagaaactccaacaccccagagg
aagggactgcgatcaagtgccctcaggccgaaaaggccagaaacccccaagcaaacaggc
cctgttataatggaaacttgggtagcagaggaggagttggagctgtgggagatcagggca
tttgctgaaagggtggagaaggaaaaagcacaggcagttgaacaacaggctaaggttagt
gaacagaagaaggcagaggagttcaaggcccaattggaggctcagctaaaacaccaacgt
ttggctgcccagcagaaacggctggaacagcagaagcagatccctgcaggaggtgtggtc
cctgcagccaccacagccagcagcactgcaaccacagtctccacaccacagaaagtggtg
gtgggccctctgacaggccccgtccccacgggaaccaaagtagtgctcaccactaaagtg
gggtctccagctacagtaacattccaacagaacaagaatttccatcaaacttttgctact
tgggttaaacaaggccagtcttcaacagccactagcacagctgccacctcagccacaact
attgccagcacagggcagaccttccagctctcaggcagcccagtaacgatggcagggaaa
gtgataactaagctgccactccctgcaaacagcaagattgttgccgtcaatgtgccatca
actcaaggaggtgtggttcaagttcagcaaaaggtattgggtatcattccatcaactaca
ggtgcaagtcaaacctttacttcattccagccaaggacagcaactgtaaccattaggcca
aacaccacagggacattaggaacaacaagcacttcacaagtagtgcaggggacaccactg
cgccccgggatgacggtgatccggacaccactgcagcagtccacccttggcaagaccatc
attcgaacacctgtagtggtgcaacaaggtcagacacagcaagtggtgactcagataatt
aggggtcaacctgtgtcaacagcagtttctagtaccagcacagcttcttccagcactggg
cagaaaaccatcacgagttctggaacagcccctcaacaagttcagccacagaccccagca
ccaccccctcgccctcagcagggccaggtgaagctgacaatggcccagctcacccagctc
acacaaggacagggtggcagtcaaggcttaactgtggtaattcagggacaaggtcaaact
actggtcagttacaattaatccctcagggtgtgactgtaatacctggtccaggacagcag
cttatgcaagcagctatgccaaatggtacaattcagagatttctgttcaccccactacca
gcagctgctactacagctagcacaactacaaccaccgtttctacttcaacctcggctgca
ggggaagcgaaggcggctctgcaggcgccaccagcaccggccgtgcccgcgggacagggc
cagcccggttcggccgtggcacagcccgcgggggctcagccccagggcgctcagcccgac
gccccgagccagcccgaggctcctgctgactccacggcccccagcgaagctcagccctcc
aaatctccggctcagtctccagcccaggctccggggctctctccagcaccaggcccgatg
cagccgctgcccgcgggcctgcccccaggccaggcccaggctcagcatccagctcaggtg
attatgaagcagaatgctgtcatagaacatttgaaacagaagaagacactgactccagct
gagagggaagaaaatcagagaatgattgtgtgcaaccaagtgatgaaatatattctggat
aagatagacaaagaagaaaaacaggcagctaagaaacggaagcgagaagagagcgtggag
caaaagcggagcaaacagaatgcgaccaagctctcagctctgcttttcaagcataaagag
cagctgaaagctgaaatactgaaaaaaagagcacttctagacaaagatctacagattgaa
gtgcaggaggagctaaagaaagatttggctaaaattaagaaagaaaaggaaagagcccaa
gcagcagctgctgcagcagcagctgcagccgccgcagccgccgctgctgccccaccaccg
ccgccaccagtgccaccagcaccgccacagctgccagcagccagtgtcacctcctcctcc
tccaccactgtccccgtgccagtctcctcccagaagaggaaacgagaggaggagaaagat
tcctcagcttccaagtccaagaaaaagaaaatgatttctactacctcaaaggaaacgaag
aaggacacaaagctttactgcatctgtaaaacgccttacgacgagtccaagttctatatt
ggctgtgatctttgtactaactggtatcatggagaatgtgttggcatcacagaaaaggag
gctaagaaaatggatgtgtacatctgtaatgagtgtaaacgggcacaagagggcagcagt
gaggagttgtactgtatctgcagaacaccttatgatgagtcgcaattttacattggctgt
gaccgatgtcagaactggtaccacgggcgctgcgtgggcatcctgcagagcgaggcagat
ctcattgatgagtacgtgtgtccccagtgccagtccacagaggatgccatgactgtgctc
agtccactcacagataaagactatgaagggttgaggagggtcctgcgctccttgcaggct
cacaagatggcatggccgttcctagaaccagtagaccccaacgatgcaccagattattat
ggtgtcatcaaagaaccaatggaccttgctaccatggaagaaagaatcttgaaacgctac
tacaaaaaggtgacggagtttgtggcagacatgaccaaaatttttgataactgccgttac
tacaatccaagtgactcccctttttaccagtgtgcagaagttctcgagtctttctttgta
cagaaactaaaaggatttaaggcaagcaggtcccataacaacaaactgcagtctacagct
tcttag
DBGET
integrated database retrieval system
