Pseudopodoces humilis (Tibetan ground-tit): 102103459
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Entry
102103459 CDS
T02921
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102103459 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102103459 (SMARCC1)
03036 Chromosome and associated proteins [BR:
phi03036
]
102103459 (SMARCC1)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102103459 (SMARCC1)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102103459 (SMARCC1)
PBAF complex
102103459 (SMARCC1)
GBAF(ncBAF) complex
102103459 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
DUF919
BRCT
SpeFL
Motif
Other DBs
NCBI-GeneID:
102103459
NCBI-ProteinID:
XP_014116147
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDMELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHTNELDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEDTVTTGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEP
DRMDGAEEEKMETETEGQAAEKVENKAESESEEGEKVPEGESERSVEKEPESEGAAEPKP
EEKEAEENKENVDGSKDKEAEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYA
ELRARQQMEQQHSQNPQQPHQHPSGAGMAPLGTPAHPGLLPHQQPPPYPMMHHQMPPPHP
PQPGQMLPGQPMAGRMMSSSIHPSPGAAPPGSTPPLGHPMAGNLIGPRVPLAAPNGMYPG
PAQPAPAEGVTPPPAGAPPASAAP
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggaggaggtttgacctgcagaatccctcccgcatggatcgcaacgtg
gagatgttcatgaacattgagaaaacactggtgcagaacaactgtctgagcagaccaacc
atctacctcattcctgacatggagctgaagctggccaacaagctgaaggacattgtcaag
cgtcaccagggaacagtcactgaagagaaatccaaggccacccaccatgtgtatccaagt
cctacctcaatggatgatgatgagtggttgagacctgtgatgaaaaaggacaagcaggtg
ctggtacattggggcttttttccagacagctacgacacctgggtccacaccaacgagctc
gacgcggaaatcgaggatcccccgattcccgagaaaccctggaaggttcacgccaagtgg
attttggacaccgatgtgttcaatgagtggatgaatgaagaggattatgaggtggatgag
aacaggaaatccgtgagttttcgccagaggatctccatgaagaatgaagagcccgtgcgg
agccctgagaggagggacaggaaagcagcagccagtacaaggaaaaggaaacattcccct
tctccaccccccactcctgtggagtccaggaaaaagacagggaagaaaggccaagcagct
ctctatgggaaaaggagggggcagaaggaagaggatgagcaggaggatctcaccaaggac
atggaggaccccaccccagtgcccaacatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaggacagcgagaacacgcccgtgaaaggaggaaccgtggcagacctggatgag
caggatgaggacacagtgacgactggagggaaggaggacgaggaccccaacaagggtgac
cagagccgctccattgaccctggggaggacaatgtcaccgagcagaccaaccacatcatc
atccccagctacgcctcctggttcgactacaactgcatccacgtgatcgaacgtcgcgcg
cttccggaattcttcaatgggaaaaacaagtccaagactccagaaatatacctggcctac
aggaacttcatgatcgacacgtaccgcctgaacccgcaggagtacctgaccagcacggcc
tgcaggaggaacctcaccggcgacgtctgcgccgtcatgagggtccacgccttcctggag
cagtgggggctcatcaactaccaggtggatcccgagagccgccccatggccatggggccc
cccccgaccccccacttcaacgtgctggccgacaccccctcggggctgatgcccctgcac
atccgcaccccgcaggttccagctgcccagcaaatgctgagctttcctgagaagaacaag
gagaagccaactgacctgcagaactttggccttcgcacagacatctactccaaaaagact
ttggccaagagtaaaggggcgagtgctggcagagagtggacagagcaggagacactgctg
ctgttagaggctctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggc
agccgcacgcaggacgagtgcatcctgcacttcctgcgcctgcccatcgaggatccctac
ctggagaactcggatgcctccctgggacccctggcctaccagcccgtgcccttcagccag
tctggcaaccccgtcatgagcaccgtggccttcctggcctccgtggtggatcctcgcgtg
gcctcggccgcggccaaggctgccctcgaggagttttcccgggtcagagaggaggtgccc
ctggagctggtggaagcccacgtgaagaaggtgcaggaagcagctcgagcctcggggaag
gtggatccaacctacgggctggagagcagctgcatcgcgggcaccggccccgacgagccc
gacaggatggatggagccgaggaggagaagatggaaacggagacagagggacaggcggcc
gagaaggtggagaacaaagccgagagcgaatccgaggagggagagaaagtcccggaaggg
gaaagcgagcggagcgtggagaaggagccagagagcgaaggggctgcagagcccaagcca
gaggaaaaggaggcagaggagaacaaggagaacgttgatggcagcaaggacaaagaggcc
gaggctgggaagaagaaagtggaacacgagatctcggaagggaacgtggccacagctgca
gctgctgccttggcctctgctgccaccaaagccaagcacctggcagctgtggaggagagg
aaaatcaagtccctggtggctcttctggtggagacacagatgaagaagctggagataaaa
cttcgccattttgaggagctggaaaccatcatggaccgggagaaagaggcactggagcag
cagaggcagcagctgctgacggagcgccagaacttccacatggagcagctcaagtacgcc
gagctgagggctcgccagcaaatggagcagcagcacagccagaacccccagcagccccac
cagcaccccagcggggctggcatggcccctctggggacaccagcccaccctgggctgctg
ccccaccagcagcccccgccctaccccatgatgcaccaccagatgccacctcctcaccca
cctcagccaggtcagatgctccctggacagcccatggcaggcaggatgatgtcctccagc
atccaccccagccctggggctgccccacccggcagcaccccaccgctggggcaccccatg
gccgggaacctcatcgggccccgcgtgccgctggcagctcccaacggaatgtatcccggc
ccggcacagccagcgcccgcggaaggagtgaccccccctccggccggagccccgccggcc
tcagccgctccctaa
DBGET
integrated database retrieval system
