Pseudopodoces humilis (Tibetan ground-tit): 102109668
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Entry
102109668 CDS
T02921
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102109668 (TNRC6C)
03036 Chromosome and associated proteins [BR:
phi03036
]
102109668 (TNRC6C)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102109668 (TNRC6C)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102109668 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
RRM_1
UBA
RRM_occluded
DUF4718
THOC7
Motif
Other DBs
NCBI-GeneID:
102109668
NCBI-ProteinID:
XP_014111343
LinkDB
All DBs
Position
Unknown
AA seq
1972 aa
AA seq
DB search
MEEKKKKKQEEKKKKEGAQKKAAEQKTKVPEPIKTSLSQPQPAGTGTSTSTSTLTNSSNG
KRASANGQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPTGALSAPGPAPGTAAAGASP
PPPPPQQGAAGQQHPGKGQPDLSHSGLGDHYENSHWGQQPAFRSEGNCSWDKVIIDRTDK
EAWPSITGAETESASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGANGAL
VQSTSNQSALGAGGANGNGGSARVWGVAAGSSSGLAHCSASGGDGKMDNMMGDGRSQNCW
GASNSNAGMNLNLNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMGNQNGNPTGT
LGAWGNLLPQESTEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPN
WGMAVGMGAIIPPHLQGLPGANGTAVSQVSGGSGEGMGSSVWGMSPGNPATGNSNSGFSQ
GNGDTVNSALSAKQNGSSSAVQKEGNGANAWDSGPPSGPGVLAWGRGGGGVGSVHSGAWG
HPNRSASNGVNGEWGKPPNQHSNSDINGKGSTGWDSSSVTSPNPAMQQGNEQMNSWAKAA
ASGTTASEGSNDSGGSQNEGSTGREGAGEGRRRDKGMIDQGQVQLPRNDLDPRVLSNTGW
GQTPVKQNTAWEFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMNSTNTSSVSGW
VNSPPAAVPTNTGWGDNNNKAPNGPGGWGESASSTTVNNAAAAKSGHAWSGTANQEDKSP
TWGEPQKPKSQNWGDGQKSNPSWTSGGGDWTDSSSVPGHLGDGKKNGSGWDSDNRSGSGW
NDSTKSGTSGWGNGTNSKANTGTSWGESLKPGPQQNWANKPQDNNVSNWGGAASVKQTGS
GWVGGPVPAKQKENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNP
IIQSSTTTNTTTTSTIINTNMVEPQPSHQSSAQPNRSPLLGPGWGEMPAVHTKSEASWGE
PSSPSAAVDNGTSAWGKPPSSGTGWGENPAEPAGTYGRTNTPAAAPALCKPASKSMQEGW
GSGGDEVNLSTSQWEDEEGDMWNNTASQESSSSCNSWGNAPKKGLQKPKTNPRLSLGTFW
RTERKRLLKDFVIEKLHRDLLKGMKTSSKQDEAWIMNRLIKQLTDMGFPREPAEEALKSN
SMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPPISKESSMDRPTFLDKLTL
SFSNQDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQNLNSSRQIPSGN
LGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLS
PAQLTSPINNPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQVARTINN
MQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPHPQAPGLPDLQTKEQQS
SPNTFAPYPLAGLNPNMNVNNMDITGGLSVKDTSQSQSRLPQWTHPNSMDNLSSAASSLD
QNSSKHGAIPGGLSIGPPGKSSLDDSYGRYDLIQNSESPASPPVAVPHSWSRAKSDSDKI
SNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGS
SPTSSQNATLPSSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKSTWSSGPISHTQASLS
HELWKVPRNTTAPTRPPPGLTNTKPSSTWGASPLGWTSSYSSGSAWSTDSSGRTSSWLVL
RNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTT
ILAEFAGEEEVNRFLAQGQALPPTSSWQSNTGSTPSRLGSSGSSHGLVRPDAGHWNPPCL
GGKGSSDLLWGGVPQYSSSLWGPPSADDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaaggtgctcagaaa
aaggctgctgaacaaaaaaccaaagtgccagaacctattaagaccagtttaagccagccc
caacctgccggtaccggtaccagtacttccaccagcactctcaccaacagcagcaatggc
aagcgcgcgtctgctaacgggcagcagcctgcggcgtcccgctacctgccccgagaggtg
cctccccgcttccgccagcaggaacagaagcagctcctaaagcgggggcagccactgccc
accggggctctgagtgcccccggcccggcgccgggcacagcagcagcgggagccagccct
cctcctcctcctcctcagcagggagcggcgggacagcagcatcccggcaagggccagcca
gatctcagccacagtggattgggagaccattatgagaattcccactggggacagcagccc
gctttcaggagtgaaggcaactgcagctgggataaagtgataatagacaggactgacaag
gaagcgtggccttccattaccggagctgagactgagtctgcctcagaatgtactacagac
actgactctgcctccaactgtggctcagagaacagtagcatggctacagggagtgcccaa
ggcaacttcactggacatacaaagaaaactaatggcaataatggcgccaacggagcactc
gtccaaagcacttctaaccagagtgcccttggagctggtggagcaaacggcaacggcggc
tcggccagggtgtggggggtggctgcgggctccagctctggcctagctcactgctctgcc
agtggtggggatggaaagatggacaacatgatgggagacggtagaagtcagaactgctgg
ggtgcttccaactcgaatgctggcatgaatcttaaccttaaccctaatgccaatccagct
gcctggcctgtacttggacatgaaggaactgtgggagcaggcaacccttccagtatttgc
agtccagtcagtgccataggtcagaacatgggcaaccagaatgggaacccaacaggcacc
ttaggtgcttggggaaacttgctgccgcaagagagcacagaaccacaaacgtccacttct
cagaatgtgtctttcagcgtacaacctcagaaccttaacactgatggaccaaataacact
aaccccatgaactcttcaccaaaccctatcaatgcaatgcagacaaacggactgccgaac
tgggggatggccgtgggcatgggggccatcatcccgccccacctgcaaggccttcctggt
gctaacggaacagcggtttctcaagtcagcgggggcagtggtgaaggaatgggcagttca
gtatgggggatgtccccaggtaatcctgccacaggaaacagcaattctgggttcagtcag
gggaatggagacactgtgaactcagcattaagtgctaaacaaaacggatccagcagtgct
gtgcaaaaggaaggaaacggagcgaacgcgtgggactcggggcctccctctggccccggg
gtcctggcctggggcaggggcggtggcggggttggcagtgtgcattctggagcctggggc
caccccaaccgcagcgccagcaacggtgtcaacggcgagtggggcaagcccccaaaccag
cattccaatagcgacatcaacgggaaaggatcaacagggtgggatagctcgagtgttacc
agtccgaatcctgccatgcagcagggcaatgaacaaatgaactcttgggccaaagctgcg
gcatctggcaccacggctagtgaaggaagcaatgacagcggtgggagtcaaaatgaaggc
agtactgggagggagggggctggagagggcaggaggagagacaaagggatgatagaccaa
gggcaagttcagttgccaagaaatgaccttgaccccagggtcctgtccaatacggggtgg
ggacagacccctgtgaagcaaaacactgcctgggaatttgaagagtccccaaggtctgaa
cggaagaatgacaatggaactgaggcctggggttgtgcagctactcaatcttcaaactca
ggggggaagaacgatgggtccatcatgaacagtacaaatacctcttcagtatctgggtgg
gtcaactctccaccggcagctgttccaacaaatacaggttggggagacaataacaacaaa
gcaccaaatggcccaggggggtggggagagtcagcaagctctactactgttaataatgct
gctgctgccaaaagcggccacgcttggagtgggaccgcaaatcaggaggacaaatcacct
acctggggtgaacctcagaaacccaaatctcaaaactggggagatggacagaaatcaaat
ccaagctggacttcaggaggtggagactggacagattcatcatctgttcccggacacttg
ggtgatgggaagaagaatggatctggatgggattctgataataggtcagggtctggctgg
aatgattccacaaagtctgggaccagtgggtgggggaatggcacaaacagcaaggctaat
acaggtacaagttggggggaatctttaaagccaggcccccaacaaaattgggctaataaa
ccccaggacaacaatgtgagtaactggggaggagctgcttctgtaaaacagacggggtca
gggtgggttggtgggccagtgccagccaaacaaaaagagaactgtgaggcaactggctgg
gaagagccatctccaccgtccattcgccgcaagatggaaatcgatgatggtacctcagct
tggggcgacccaaattacaacaacaacaagactgtaaacatgtgggatagaaataatcct
ataattcagagcagtaccacaaccaacaccaccaccactagcaccattatcaacaccaac
atggttgaacctcagccatcgcaccagtcaagtgcccagccgaaccggtccccgctgctt
ggcccaggctggggagagatgcctgctgtccacaccaagagcgaagcttcctggggagag
ccctcctccccttctgctgcagttgataatggcacttcggcgtgggggaagccccccagc
agtggcaccgggtggggagagaatcctgccgagccagcagggacctatggaagaacaaac
actccagctgctgccccagcactgtgcaaaccagcttcaaaatctatgcaagaaggctgg
ggcagtggtggggatgaagtgaatctcagtactagtcagtgggaagatgaagaaggagat
atgtggaataatactgcttcacaagagagcagctcctcctgtaattcctgggggaatgcc
ccgaagaaaggacttcaaaagcccaaaacaaatccgcgcttgtcccttggtactttctgg
agaactgaaaggaagagacttcttaaggattttgtgatagaaaagctgcacagagatctt
ttaaagggcatgaagacatctagcaagcaggatgaggcctggatcatgaaccgtctgata
aaacagctcacagacatgggcttccctagagagccagcggaagaggccttgaagagcaac
agtatgaatctcgatcaggccatgagtgctctgctggaaaagaaggtggaaatggacaag
cgtggaatgggagtgaccgactataatggaatggtcaccaaaccccttggctgccgccca
ccaccaatctccaaagagtcttccatggaccgccccaccttccttgacaagctcaccctt
tctttctccaatcaggatggcggcctagtggaagagcccactacttcaccatttttgcct
tcaccaagcctgaagctccccctttcaaacagtgcactccctaatcagaccctgggcggg
attgcctcagggctgggcatgcaaaacttgaattcttctagacagataccgagtggcaat
ctgggtatgtttggcaatagcggagcagcacaagccaggaccatgcaacagccgcagcaa
ccgccagtgcaacctcttaattcatcccagcctagtcttcgtgctcaagtgcctcagttt
ctatcccctcaggttcaagcacagcttttgcagtttgcagcaaaaaacattggtctcagc
cctgcacagttaacctcgccaattaataatcctcagcatatgacgatgttgaaccagctc
tatcagctgcagctggcgtaccaacgtttacaaatccagcagcagatgttacaggctcag
cgtaacgtttccggacccatgagacaacaggagcagcaagttgcacgtacaatcaataac
atgcagcagcagatccagcagcaccagcgccagctggcccaggccctgcttatgaagcag
cagcctccccctccacatctatctttgcacccctctgcaggcaaatcagccatggatagc
ttttcaccccatccccaggctcccggccttcctgacctgcagaccaaagagcaacagtct
tcaccgaacacctttgctccttaccctcttgctggactgaacccgaacatgaatgtaaat
aacatggacattactggtggtttgtcagtgaaggacacttctcagtcccagtctcgcctt
cctcagtggacacaccccaactcaatggataatctgtctagtgctgcttcttcgcttgac
cagaactccagcaagcacggtgctatccctggaggtttgagtattggtcctccgggaaag
tcctccctcgatgactcctacggccgctatgatctgatccagaacagtgagtctcctgcc
agcccacctgtagctgttcctcacagctggtcacgtgccaaatccgatagtgataagatt
tccaatggctccagcataaactggccaccagagtttcacccaggagtgccatggaaagga
ctgcagaatattgatcctgaaaatgaccccgatgttactcctggcagtgttccaactggg
cctaccataaacaccacgatacaggatgtgaatcgctatctgctcaagagtggagggtca
tccccaacatcatctcagaatgccacgctgccttcatcgagtgcctggccgcttagtgcc
tccggctacagtagctctttcagcagcattgcatctgcacctagcattgcaggtaaactg
tcagacatcaagtccacgtggtcctctggcccaatctctcacacccaagcctctctgtcc
cacgaactctggaaggtacccagaaacactacagctccgacgagacctcctccaggctta
accaacaccaagccatcctccacgtggggtgccagtcccctgggctggaccagctcttac
tcctctggttctgcatggagtactgacagctcagggagaacaagcagctggctggttctt
cggaacctcaccccccagatcgatggttctacactgcggacactgtgtttgcaacatggc
cctctcatcacattccacttgaacctgacccaagggaatgctgtggtccgatacagttcc
aaggaggaagcagccaaggcccagaagtctctgcacatgtgtgtcctgggcaacaccacc
atcctggcggagtttgccggcgaggaagaagtgaatcgtttcctggcgcaggggcaggcg
ctgccgcccacctccagctggcagtccaacactggatccaccccgagccgcctgggctcc
tcgggcagctcccacgggctggtgcgccccgacgccggccactggaaccccccgtgcctg
gggggcaagggcagcagtgacctgctgtggggaggggtgccccagtactccagcagcctt
tggggccccccgagcgccgacgacggcagagtcatcgggagccccacgcccctcaacacc
ctcctgccgggggatctgctcagcggggaatccatctag
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