Pseudopodoces humilis (Tibetan ground-tit): 102110258
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Entry
102110258 CDS
T02921
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102110258 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102110258 (PBRM1)
03036 Chromosome and associated proteins [BR:
phi03036
]
102110258 (PBRM1)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102110258 (PBRM1)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
102110258 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102110258
NCBI-ProteinID:
XP_014107122
LinkDB
All DBs
Position
Unknown
AA seq
1658 aa
AA seq
DB search
MRRLAFRGAGSTLVNLKKLDSMGSKRRRATSPSSSISGGDFDDAHHSTNIPGPSRKRRRL
SNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQ
QKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDPE
EDDDDDEGHDNQANSELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKI
FNMKKAEIEHSELAKSSLRIRTASNLAASKLTGPSSQGKGSVGDERNSSNKYYRNKRSAQ
GDRLSAITMALQYGSESDEDAALAAAARYEEGESEAESITSFMDTSNPLYQLYDTIRSCR
NNQGQLISEPFFHLPSKKKYPDYYQQIKTPISLQQIRTKLKNHEYETLDQLEADLNLMFE
NAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKN
IRKQRMKILYNAVLEAREPGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRN
DKYAAEEAMIEDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLAEDDDVASP
KLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYY
VTIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLL
ETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNK
PPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRD
ELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGS
AGLSNLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCW
FYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVY
VCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKADEEKHSETLE
DSKVGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRV
GRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCVVL
SFKDFLSCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIV
PQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEMGEEEGDMTEAPSMPQLQAPLASDLDIM
PYTPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTE
WRNLEATKKAEYEGMISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIP
GIPPPGVIGQNVSPMVGTPAPGASPFGQQMGILGPPGQQAPPPYPGQSPASQPVMQQPST
PMFVSPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSH
WLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENV
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgaggagattggcttttcgaggtgctggttctactctggtaaatctgaagaagttggat
tccatgggttccaagaggcgaagagctacctctccttccagcagcatcagcggtggagac
ttcgatgatgcccatcactccaccaatataccaggcccaagcaggaagaggaggagactt
tccaatctcccaactgtagatcctattgctgtctgccatgagctctacaacaccatcaga
gactacaaagatgagcagggcaggctcctttgtgagctcttcatcagggcacccaagaga
agaaatcagccagattattatgaagtggtttctcagccaattgatttaatgaaaatccag
caaaagctgaagatggaggaatatgatgatgtgaatgtgctgactgctgatttccagctt
ctctttaacaatgcaaaggcttactataagccagattctcctgaatataaagctgcctgc
aaactgtgggagctgtatttgcgcacaaaaaatgaatttgttcagaaaggtgatcctgag
gaggatgatgatgatgacgaaggacatgacaatcaagcaaattctgaattatcatctcca
ggttacctgaaggaaattctggaacagcttcttgaagctgtagctgttgccacaaacccc
tcaggacgcctcataagtgaactgtttcagaaacttccttctaaagtgcaatatccagat
tattatgcaataataaaggaacccatagatcttaaaactattgcccaaaggatacagaat
ggaacttataaaagcattcatgccatggccaaggacatagatcttctggcaaagaatgcc
aaaacctacaatgagcctggatcccaagtattcaaggatgcaaatgcgattaaaaagata
tttaatatgaaaaaagctgagattgaacacagtgagttggccaagtcaagtctccgaatc
aggactgcatcaaatttggctgcttccaagctgacaggtccttcctcacagggtaaaggc
agtgttggggatgagagaaattcttctaacaaatattatcgtaacaaaagatcagcccaa
ggggatcgtttatcagcaataaccatggcattgcaatatggatcagaaagcgatgaggat
gcagctttggctgctgctgctcgttacgaagagggagagtctgaagctgagagcattacc
tcctttatggacacttctaatcctctttaccagctttatgacactattagaagttgccgt
aataaccagggccagctcatctctgaaccctttttccacttgccctccaagaaaaagtat
cctgattattatcagcagattaaaactcccatttcattgcagcagatcagaaccaagctg
aagaaccacgagtatgaaactttagatcagttggaggctgatctgaatttgatgtttgaa
aatgccaagcgctacaatgtccccaattctgccatctataaaagagtgctgaaaatgcag
caggttatgcaagcaaagaagaaggagcttgctaggagagatgacattgaggatggggac
agcatgatttcttctgctacatctgatactggaagctcaaaaaggaaaagtaaaaagaac
atacgaaagcagcggatgaagatcttgtacaacgcggttctggaagctcgagagcccggc
acaggcaggcggctctgtgatctgttcatggttaagccatccaaaaaggactatccagac
tattataaaattatcctggagccaatggacttgaagatgatagagcacaatatccgcaat
gacaagtacgcggcggaggaggccatgattgaggacatgaagctcatgttccggaacgcc
aggcattacaacgaggaaggctcccaggtatacaatgatgcccatatgctggaaaagatc
cttaaagaaaaaaggaaagagctgggacccttggctgaagatgatgatgttgcatcccct
aaactaaagctaagtaggaaaagtggcatttctcccaagaagtccaagtacatgactcca
atgcagcagaagctgaatgaggtgtatgaggctgtgaagaactacacggacaagcgcggg
cggcggctgagcgcgatcttcctgcggctgccgtcccgctccgagctccccgactactac
gtcaccatcaaaaagcctgtggacatggaaaagatcaggagccacatgatggcaaataaa
tatcaggacatagactccatggtggaggactttgtcatgatgttcaataacgcttgcaca
tacaatgaaccagagtctttgatttataaagatgccctggtcctccacaaagttttgctt
gaaacacggagagaaatagaaggagatgaggattctcatgtgcccaatgtcactttgctg
attcaggaactcatccataacctctttgtatctgttatgagccaccaggatgatgaggga
agatgctacagcgactccttagctgagattcctgctgttgatcccaacttcccaaataaa
cctcctctgacttttgatattatccgaaaaaatgttgaaaataatcgctatagaagattg
gacttgttccaggagaacatgtttgaggtactggagagggcacggagaatgaacaggact
gattcagagatctatgaggatgcagtagaacttcagcagttcttcattaaaattcgagat
gaactgtgtaaaaatggagagattctgctgtcacctgctctcagctacaccaccaagcat
cttcacaacgatgtagaaaaggaaaagaaggaaaagctgcccaaagaaatagaggaggat
aagctcaaaagggaggaggagaagagagaagctgaaaagagtgaagattcctctggatca
gctgggctgtcaaatttgcatcggacctacagccaggactgcagcttcaagaacagcatg
taccatgtgggggattatgtgtatgtggagcctgcagaggccaacttgcagcctcacatc
gtctgcattgagaggctgtgggaagattcagctggagagaaatggctctatggctgctgg
ttttatcgaccaaatgaaacttttcaccttgcaacacgaaaattcctggagaaagaagtt
tttaaaagtgattattacaataaagttcctgttagtaaaattttaggcaaatgtgtggtc
atgtttgtcaaggaatattttaaattgtgccctgaaaacttcagagatgaggacgtttat
gtgtgcgagtcgcgctattctgcgaagacaaagtcttttaaaaagattaaactgtggact
atgcctgtgagctctgtcagatttgtcccacgagatgtgcccctgcctgtggtcagagtt
gcttctgtgtttgccaatacagacaaagcagatgaggagaaacacagtgaaacactggag
gacagtaaggtgggagaaagtatccttcatcttgaaaaggacaaagaagatgttccagta
gaaatgtccaatggggaacctggttgccattactttgaacagctctgctacaatgacatg
tggctgaaggttggagactgtgtcttcataaaatcacacggcctggtgcggcctcgagta
ggaagaattgagaagatgtgggtgcgagatggagccgcatatttctttggtccaatcttt
atacatcctgaagaaactgagcatgagccaactaaaatgttctacaagaaggaggtgttt
ttgagtaacttggaggagacctgtcccatgacttgcattttgggaaagtgtgtcgttctg
tcattcaaagacttcctctcctgcagaccaacagaaatctccgaaaacgatgtttttctt
tgcgagagccgctacaacgaaagtgacaaacaaatgaagaaattcaaggggttgaagagg
ttttcactgtctgcaaaagttgtagatgatgaaatatactattttagaaaacccatagtt
cctcaaaaagagccatctcctctactggaaaagaagattcagcagctggaagcaaaattt
gctgagttggaaggaggtgatgaggacatggaagagatgggagaagaggaaggtgatatg
actgaagcaccttctatgcctcagcttcaggcccccttagccagtgatttggatataatg
ccttatactccaccacagtccactcccaagtctgttaagggcagcaccaagaaggaggga
tcaaaaaggaagatcaacatgagtgggtacatcttgtttagcagcgagatgagagctgtg
attaaagctcagcacccagactactcctttggagagctcagcagacttgtaggaactgaa
tggagaaacttggaagcaacaaagaaagcagaatatgaaggcatgataagtggctatcca
ccggtgctgccacctttgcagggcccagttgatggcattgttagcatgggcagcatgcag
ccacttcacccaggggtgcccccaccccaccaactcccgccaggtatgccaggcatccca
ggcatcccaccacccggtgttataggccaaaatgtgtcccctatggtaggcactccagca
ccaggagcaagtccttttggacagcagatggggatcctgggcccgccgggccagcaggcg
cccccgccgtacccagggcagagccctgccagccagcccgtcatgcagcagcccagcacc
cccatgttcgtctcccctccaccaaagacacagaggctcctccattctgaagcctacctg
aaatacatcgaggggctcagtgctgagtcaaacagtatcagcaagtgggaccagaccctt
gcagcacggagacgagatgtgcacttgtccaaggagcaggagagccgcctgccctcgcac
tggttgaagagcaaaggggctcacaccaccatggccgacgcgctgtggcgcctgcgggac
ctgatgctgcgtgacaccctgaacatccgccaggcctacaacctggagaacgtgtag
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integrated database retrieval system
