KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102110901
Entry
102110901         CDS       T02921                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
  KO
K10755  replication factor C subunit 2/4
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03030  DNA replication
phi03410  Base excision repair
phi03420  Nucleotide excision repair
phi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:phi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102110901 (RFC4)
   03410 Base excision repair
    102110901 (RFC4)
   03420 Nucleotide excision repair
    102110901 (RFC4)
   03430 Mismatch repair
    102110901 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phi03032]
    102110901 (RFC4)
   03036 Chromosome and associated proteins [BR:phi03036]
    102110901 (RFC4)
   03400 DNA repair and recombination proteins [BR:phi03400]
    102110901 (RFC4)
DNA replication proteins [BR:phi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102110901 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    102110901 (RFC4)
Chromosome and associated proteins [BR:phi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102110901 (RFC4)
DNA repair and recombination proteins [BR:phi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102110901 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    102110901 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_assoc_2 Rad17 AAA_16 AAA_11 AAA_22 AAA_30 AAA_24 DUF815 Mg_chelatase SLFN-g3_helicase DNA_pol3_delta AAA_14 RuvB_N AAA_19 AAA_5 AAA_23 TIP49_C bpMoxR AAA_28 ResIII AAA_7 AAA_18 AAA_3
Other DBs
NCBI-GeneID: 102110901
NCBI-ProteinID: XP_005525109
LinkDB
Position
Unknown
AA seq 362 aa
MQAFLKGPASISTKPVAAKEKSAAGSSGEGKRTKPIPWVEKYRPKNVDEVAFQDEVVAVL
KKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPDLFRQRVLELNASDERGIQVIREK
VKAFAQLTASGSRSDGKMCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNY
ISRIIEPLTSRCSKFRFKPLSDSIQQQRLLDVSEKEHVKISNEAVSYLVKVSEGDLRKAI
TFLQSATRLMGGKEITEKIITEIAGVIPKETIDELLLGCQSGSFEKLETLAKNLINEGFA
VAQLVNQLHDTIVESEDYSDKQKSAIVEKLAEVDKCLADGADEFLQLMSLCALVMQQLTQ
NT
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcaggccttcctcaagggcccggcctctatcagcaccaagcccgtcgctgccaaggaa
aagagcgcggccgggagcagcggggagggcaagaggaccaaacccatcccctgggtggag
aaatatcgtcccaaaaatgtggatgaagtcgccttccaggatgaagttgtagctgtgctg
aagaaatccctcgaaggtgctgatcttcccaatctgttgttctatggcccacctggaact
ggaaagacttccactattttagcagctgcaagagaactgtttgggcctgatttattccga
caaagagtccttgagttaaatgcttctgatgagcgtgggatacaagtgattcgggaaaaa
gtgaaggcttttgctcagctaacggcatctggaagccgttcagatggcaaaatgtgtcct
ccttttaaaattgtgatcctggatgaagcagactctatgacttcagcagcccaggcagcc
ttaagacgcacaatggagaaagaatctaaaacaacacgtttctgtcttatttgtaactac
atcagcagaataattgagcctttaacatctcgatgctccaaattccgcttcaagcctttg
tctgacagtatccaacagcagaggctgttggatgtttctgagaaggaacatgtgaaaatc
agtaatgaggcagtatcatacctggtgaaagtgtcagaaggagacttaagaaaagcaatt
acttttcttcaaagtgccactcgcttaatgggtgggaaggagatcacagagaagataatc
actgaaattgctggggtcatccctaaagaaacaattgatgaactgctattgggctgccag
agtggttcttttgagaaactggaaacactggcaaagaatctcatcaatgaggggtttgct
gttgctcagcttgtaaaccagctgcatgacaccattgtggagagcgaagattacagtgac
aaacagaaatctgccatagttgagaaacttgcagaagtggacaaatgccttgcagatggt
gctgatgaattcttgcagctgatgagtctctgtgcccttgtgatgcagcagctcacacag
aacacctga

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