Pseudopodoces humilis (Tibetan ground-tit): 102111894
Help
Entry
102111894 CDS
T02921
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi00310
Lysine degradation
phi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102111894 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102111894 (PRDM2)
03036 Chromosome and associated proteins [BR:
phi03036
]
102111894 (PRDM2)
Enzymes [BR:
phi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
102111894 (PRDM2)
Transcription factors [BR:
phi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102111894 (PRDM2)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102111894 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-H2C2_2
zf-C2HE
zf-C2H2_11
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
102111894
NCBI-ProteinID:
XP_005528372
LinkDB
All DBs
Position
Unknown
AA seq
1698 aa
AA seq
DB search
MNQNTTDAPVAVETLDDVPEHVLRGLPEDVRLFPSAVDKTRLGVWATKSILKGKKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPEKGNWLRYINWARSGKEQNLFPLEINR
TIYYKSLKPIAAGEELLVWYNGEDDPAIAAAIEEERASARSRRHSPKARRGKKKTQESKN
KGKKATDTKQKKTDLDSTSADMRDSKEGHKEEDETPSVSAVLSLEQTAVIQEMVNQDVLP
KLMIPSPTNEPQAVTEDKQGEAINCASDDLDDDEEEDEEEEDEEEMEDTNTPKENAEMPL
ICEEKLDFIEEQKSTSEESPESSPKKKLVVKIPKAQGESNGDVQETFMFPCQHCERKFTT
KQGLERHMHIHISTLSHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLD
NVADNQVIVDDGLKDDLNVSSLVQDSVVLDSEKVSQEMSNSAFAEENKEPKELHPCKYCK
KVFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPPLPTEPAPAVQSVYIASTEIEEEG
EGDDVYLMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVE
ISSNLKVTQTHVNEPPKEPSSSGNSESKKRRTASPPLVPKIKTEIDPEPITPTSSLNLPL
SISTESLTFHKEKGVYLSSKLKQLLQTQDNKKITPSSEIPKTGPSVTASPILPPVSGRFK
RRTSSPPSSPQHSPVLRDFVKSEGKTVWNDNIRSSKMPKLESHSNSPAWSLTGREDKETL
SPLCFEEYKISKDWTAAPTFGNVCNQQPLDLSSGMKQRSDVKSKTQVPWESVLDLSVHKK
PCSDAEIREYKENSTQPACSGVKKKKPTTCMLQKVLLNEYNGTDVAPESALGTDSAASPS
KALEPQAEPDADPALAASSSTDTQPLSSSNSPVPQASAAPAVCQLPPLLTPTNPPSPPPC
PPVLTVATSPPPLLPTMPLAIPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSP
VPSVEPLISAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLESS
LPIIKQEEAESEQQKAREDPHTSSESGVVQETFNKSFVCNVCESPFLSIKDLTKHLSIHA
EEWPFKCEFCVQLFRDKRDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDK
ECTHHEFESGTLRPQNFTDPSKANAEHMQSLPEDSLEPSKEEEDEDLNDSSEELYTTIKI
MASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRC
TKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKNAFR
RMGQPKRLNFNVEISKMSSNKLKISALKKKNQLVQKAILQKKKSAQQKAELKNNPSETDS
HICPYCNREFTYIGSLNKHASYSCPKKPISPSSKKNSSKKSAASSPANSDKGSNQRRRTA
DAEIKMQSTQPHLGKTRARTSGPAQLQLPSASFKSKQNVKFVPSMRSKKPNSSSSLRNSS
PVRVSKMSHVDGKKTKVVSKNNSTGISSKASRKLHVRIQRNNKAVLPSKSAVASKKKADR
FSVKSRERIGGPITRSLQQAANAEAAENKRDESSTKQELKDFSYRLRVASRCPSSSSHNP
STRQCKKSSSTTSHFFKE
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaactgacgcccctgttgctgtggagaccttggatgatgttcctgag
cacgtgcttaggggccttcctgaggacgtgaggctcttcccatctgctgttgacaagact
cggcttggtgtctgggcaacaaagtcaattttgaaaggcaagaaatttggaccatttgtt
ggtgataagaaaaaaagatctcaagttaagagcaatgtgtacatgtgggaggtgtattac
cccaacctgggctggatgtgtgtggatgccactgacccagagaagggcaactggctgcgc
tacataaactgggcccgctcagggaaggagcagaacctctttcctctggagatcaacagg
accatttactacaagagtttaaagccaatcgcggcgggcgaggagctgttggtgtggtac
aatggcgaggacgacccggcgatagcggccgcgatcgaggaggagcgagcgagcgcccgc
agccgccggcactccccgaaggcccgcagaggaaagaagaagactcaggaaagtaaaaac
aagggaaagaaggcaacagatacaaaacagaaaaagactgatttggattctacttctgca
gatatgagggattctaaggagggtcataaagaggaagatgaaacgccttctgtttctgct
gtgctgtctctggaacaaacagctgtgattcaggaaatggtaaatcaagatgtacttcca
aagctgatgatccccagtccaaccaatgaaccacaagcagtaactgaagacaaacaagga
gaagcaataaactgtgcatcagatgatttagatgatgatgaagaggaggatgaagaagag
gaagatgaagaggagatggaagataccaatacgcctaaagaaaatgctgaaatgcctttg
atatgtgaagaaaagttggacttcatagaagaacagaagagtacatcagaggaatctcca
gaaagctctccaaagaaaaaactcgtggtgaaaattccaaaagcacagggggaatccaac
ggtgatgttcaggaaacattcatgtttccctgccagcattgtgagaggaagttcacaaca
aagcaaggactcgagcgccacatgcacatccatatatccaccctgagccacgcgttcaag
tgtcgatactgcgggaaggcctttggcactcaaatcaacaggcggaggcacgagcgacgc
catgaggccgggccgaaaaggaaacccttcctgacactgacgtcgtcacaacacttggat
aatgttgctgataaccaagtgattgtggatgacggtcttaaagatgacctgaacgtttcc
agtcttgtgcaagattctgttgtcttggattctgaaaaagtttcccaggaaatgtcaaac
tctgcgtttgctgaggaaaataaggagcccaaagaattgcatccgtgcaaatactgcaaa
aaggtttttggtactcacaccaacatgcggaggcatcagcgtagggttcacgagcgtcat
cttattcccaaaggtgtcagaagaaaagggttctttactgaagagccacctctcccgaca
gagccggccccggcagtccagagtgtgtacatagcaagcacagaaatagaagaggaaggt
gaaggagatgatgtctatcttatggatatatccagcaatatctctgagaatttaaattac
tacattgatgggaaaattcagtccaacagcagtactagcaattgtgacgtgattcagatg
gaatccaactccgcagacttgtatggattgaattgtataatcagtccggtcacagtggaa
atttcctcaaatttaaaggttacacaaacacatgtgaatgaacctcctaaggaaccctct
agcagtgggaacagtgaatccaaaaagagaagaactgccagccctcctcttgtaccaaaa
ataaaaactgaaatagacccagaacctataactcctactagttctttaaatcttcctctt
agcatttcaacagaaagcttaacttttcataaagaaaaaggggtttatttgtcatcaaaa
ttaaagcagcttcttcagacacaggacaataagaagataactccatcaagtgaaatccct
aaaacaggaccttctgttacagcatcacctattttgcctccagtatccggcagatttaaa
agaaggaccagctctcctcccagttctccacagcacagtccagtgcttcgagactttgtc
aaatctgaggggaaaactgtgtggaatgataatattcggagttcaaaaatgccaaagtta
gaaagccacagcaattcacctgcttggagcttgactggaagggaggacaaagagactttg
agccctctttgctttgaagaatataaaatatcaaaagactggacagcagctccgactttt
ggcaatgtgtgcaaccagcagccactggatttatccagtggtatgaaacaaaggtctgat
gtcaaaagcaagactcaggttccctgggaatccgttttagatctaagtgtgcataagaaa
ccttgcagcgatgctgagattagggaatacaaagaaaattccacgcagccagcgtgtagt
ggtgttaagaagaagaaacccaccacttgcatgttgcagaaggttctgctgaacgagtac
aatgggacggatgtggccccagagagcgcgctgggcacggacagcgccgccagccccagc
aaggccctggagcctcaggcagagcccgacgcggatcccgctctcgcggcgtcgtcttcc
actgacactcagcccctcagctcctccaattcccctgtgccacaggcgtctgctgcacct
gccgtgtgccagctgcctccattgttaacgcccaccaaccccccctccccgccaccctgc
ccgcccgtgttaacagtggccacctcacctccccccctgctcccaacgatgcccttggca
attccagatgtctctgccagtgccactaacacttcctcctgtccctcgccgctctccaac
accaccacccagtccccgctgccagttctttcacctacggtttctccttctccatcccct
gtcccttctgttgaacctcttatttctgctgcttcgcctggcccccctacactgtcttct
tcgtcttcctcctcctcttcctcctctttctcatcctcttcttcctcatcatctccgtct
ccacctcctctttctgtagtttcttctgttgtttcctctgctgataaccttgaaagttct
ctcccaataataaaacaggaagaagctgaaagcgagcagcagaaagcaagagaagatcct
catacttcaagtgaatcaggagtagtgcaggaaacgttcaacaagagctttgtgtgcaat
gtctgcgaatcaccttttctttccattaaagacctaacgaagcatttatccattcatgct
gaagaatggcccttcaaatgtgaattctgtgtacagctttttagggataaaagagacttg
tccgaacatcgctttctgcttcacggagtagggaatatctttgtttgttcagtgtgtaaa
aaggaatttgcttttttgtgcaatttgcaacagcatcagcgggatctccatccagacaaa
gagtgcacacatcatgagtttgaaagtgggactttgagaccccagaattttactgacccc
agtaaggcaaatgcagagcacatgcagagcctgccagaagattctttggaaccttcaaaa
gaggaggaagacgaagatctaaatgattcttctgaagagctttatactactataaaaata
atggcttctggagtgaaatctaaagatccagatgttcgtatgggcctcaatcaacactac
ccaagctttaaaccacctccgttccagtatcaccatcgtaatcctatgggtattggagtt
actgcaacaaacttcacaacccacaatatcccacagacttttactactgccattcgatgc
acaaaatgtggaaaaagtgttgataacatgcctgagttacacaaacacatactggcctgt
gcatctgctagtgataaaaagagatacacacctaaaaaaaacccagtacccctcaaacag
acagtgcagcctaagaatggtatggtggttattgctgggcctgggaagaatgccttcaga
cgaatgggtcagcctaaaagactcaatttcaatgttgagattagcaaaatgtcctccaat
aaactaaaaataagtgcattgaaaaagaaaaaccagcttgtccagaaagctatcctgcaa
aaaaagaaatctgcccagcagaaggcagaattgaaaaataacccatctgagacggactct
cacatctgcccctactgtaacagagagttcacttacattgggagtttgaacaaacacgca
tcatacagctgccccaaaaaacccatctccccctcctccaaaaagaattcttccaaaaaa
agtgcagcttcttcacctgcaaacagcgacaaaggcagcaaccagcgcaggcgaacagca
gatgcagaaatcaaaatgcagagcactcagcctcacctgggcaagacgagagcgcgaacc
tcaggacctgcacagctccagctcccctctgcctccttcaagtccaaacaaaacgttaaa
tttgtaccttccatgcgatctaaaaagccaaattcatcttcatcgttgaggaactctagt
cctgtaagagtgtctaaaatgtcccatgttgatgggaaaaaaactaaggtggtttctaag
aacaattccactggaatctccagcaaagcgtcccggaaattgcacgtcagaatacaaagg
aataataaagcagttttgccaagtaaatctgctgtggcaagtaagaaaaaggcagacagg
ttcagtgtaaaatctagagagaggattggaggaccaatcacacggagcctgcagcaggca
gcaaatgcagaggcagcagaaaacaaaagagatgaaagcagtacaaagcaagagctaaaa
gatttcagctacaggctccgcgtggcctctagatgtccttcctcctcctcgcataacccc
agcaccaggcagtgcaagaaatccagctccaccacatcccacttcttcaaggaatag
DBGET
integrated database retrieval system
