Pseudopodoces humilis (Tibetan ground-tit): 102113504
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Entry
102113504 CDS
T02921
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102113504 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102113504 (SF3B3)
03041 Spliceosome [BR:
phi03041
]
102113504 (SF3B3)
03036 Chromosome and associated proteins [BR:
phi03036
]
102113504 (SF3B3)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102113504 (SF3B3)
Spliceosome [BR:
phi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
102113504 (SF3B3)
Complex B
102113504 (SF3B3)
Complex C
U2 SnRNP specific factors
102113504 (SF3B3)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
102113504 (SF3B3)
TFTC complex
102113504 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
102113504
NCBI-ProteinID:
XP_005526356
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacctaaccttgcagcgtgccacaggcattagctttgctatccatggc
aatttctcaggaaccaaacaacaagaaattgttgtttcccggggcaagatcctggagtta
cttcgccctgatcccaacacaggcaaggttcacactctgctgaccgtggaggtgtttgga
gtcatccggtccctcatggcctttaggctgacaggggggaccaaagactacattgtggtg
ggcagcgattcggggcgcatcgtcattctggagtaccagccctccaagaatgtgtttgag
aagatccatcaggaaacctttggcaagagtggatgccgcagaatcgttccaggccagtat
ttggctgtggacccaaagggccgtgccgtcatgatcagtgccattgaaaagcagaagctg
gtgtatatcctgaacagagatgctgctgctcgactcaccatttcctccccactggaagcc
cacaaggccaataccttggtctaccatgtggtaggagtcgatgtggggtttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatcccacaggtgaagct
gcagccaacacacaacagacattgacgttttatgaattggacttgggtttgaaccatgtt
gtcaggaaatacagtgagcccctggaagagcatggcaacttcctcataacagttccgggt
ggttctgatggccccagtggggtactgatctgttctgaaaattatattacttacaaaaac
tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac
ccagagaggggtatgatttttgtctgctctgctacacataagaccaagtccatgttcttc
ttcctggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac
atggtaacagagattcgactgaagtactttgacactgttcctgttgccgctgccatgtgt
gtgctgaaaacagggtttctctttgtggcatctgaatttggaaaccattacctataccag
atagctcacctgggggatgacgatgaggagccagagttttcctctgccatgcctcttgag
gaaggagatacattcttttttcagccacgacctctgaagaacctggtgctggtggatgag
ttggacagtttgtctcctattctgtgttgtcagatagcagatttggccaatgaagacaca
ccccagttgtatgtggcatgtggtcgggggcccaggtcatccctgagggttttaagacat
ggacttgaggtatccgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg
actgtgaggagacatgttgaagatgaatttgatgcttacattattgtgtccttcgtaaat
gccacactggtgctgtctatcggagagactgtagaagaagtgactgactctggattcctg
ggtactacacccaccttgtcctgctctcttcttggtgatgatgctttggtacaggtttat
ccagatgggattcggcacatccgagcagataagagagtaaatgaatggaagacaccagga
aagaaaaccattgtaaaatgtgctgtgaaccaaagacaagtagtgatagcactgactgga
ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtacacagagaga
aaggagatgtcagccgacgtcgtttgcatgagcctggccaacgttccccctggggagcag
cgttcccggttccttgctgttggactggtggacaacactgtcagaattatttcacttgac
ccttcggattgcttacagcccctgagtatgcaggcgctgcccgcacagcccgagtcgctg
tgcatcgtggagatgggtggcacagagaagcaggatgagctgggagagaggggctccatt
ggctttctgtacctgaacattggactgcagaacggtgtgctgctgcgaaccgtcctggac
cccgtcaccggcgatctctctgacaccaggaccagataccttggctcccggcctgtcaaa
ctcttccgtgtccgaatgcaaggccaagaggcggtgctggccatgtcaagccgttcctgg
cttagttattcctatcagtcacgcttccacctgactcccctgtcttatgagacactggag
tttgcatctggttttgcttctgagcagtgccctgagggcattgtggccatctccacaaac
acattgaggattttggcactggagaagctgggagcagtcttcaaccaggttgccttccca
ttgcagtacacaccccgaaaatttgtcattcacccagaaagcaacaacctgatcatcatt
gagacagaccacaatgcttacactgaggccacaaaagcacagaggaaacagcaaatggct
gaggaaatggtggaagctgcaggtgaggatgagagggagctggctgcagagatggctgca
gcctttctgaatgagaatcttcctgagtccatcttcggtgcccccaaggcagggaatggt
cagtgggcctctgttatcagagtgatgaaccccatccagggaaatacattagatctggtc
cagctggagcagaatgaagctgctttcagcgtggctgtgtgccggttctccaacactggt
gatgagtggtacgtgctggtgggagtcgccaaggacctgattctgaacccacgctcagtt
gctggggggtttgtctacacatacaagctggtgaatagtggtgagaagttggagtttctc
cacaagacccctgtggaggaggtccctgcagccattgctccattccaaggccgagtctta
attggagttgggaaactcctgcgtgtatatgacctgggcaagaagaaactgcttcggaaa
tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagtg
attgtctcagatgttcaggagagtttcatctgggtgcgttacaaaaggaatgagaaccag
ctcattatctttgctgatgatacttacccccggtgggtcactacagcaacactcctggat
tacgacactgtggctggagcagacaagtttggtaacatctgtgtggtgagattgccgccc
aacaccaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacaggggc
ctgcttaatggagcatcacagaaggctgaagtgattatgaattatcacgtgggagaaaca
gtgctttccttgcagaagaccacactgattccaggaggctctgaatctcttgtttataca
accttgtcaggggggataggaatcttggtcccttttacttcccatgaggatcatgacttc
ttccagcatgtggaaatgcacttacggtccgagcaccctcctctctgtggacgagaccat
ctcagtttccgttcctactacttcccagtgaagaatgtgattgatggggacctgtgtgag
cagttcaactccatggagcctaacaaacagaagaatgtggccgaggagctggaccggacc
ccacccgaggtgtccaagaagctggaagacatccgcacacgctacgctttctga
DBGET
integrated database retrieval system
