Pelagibacterium halotolerans: KKY_1004
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Entry
KKY_1004 CDS
T01645
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
phl
Pelagibacterium halotolerans
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phl03400
]
KKY_1004
DNA repair and recombination proteins [BR:
phl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KKY_1004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Rubredoxin_2
ChlI
AAA_16
AAA
DnaB_C
RecA
AAA_30
AAA_22
SLFN-g3_helicase
AAA_24
Lon_C
nSTAND3
NTPase_1
AAA_14
ATPase_2
MeaB
GvpD_P-loop
SRP54
CbiA
ArsA_ATPase
DAP3
KdpD
Fer4_NifH
NACHT
IstB_IS21
Zeta_toxin
DEAD
MCM
ABC_tran
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AEQ51039
UniProt:
G4RFZ6
LinkDB
All DBs
Position
complement(983186..984580)
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AA seq
464 aa
AA seq
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MAKLKSSYVCQSCGNVTPRWAGRCEACGEWNSIVEEVATSGVGAGPKAAVASGRPVELVP
LSGESEDAIRIESKNGELDRVLGGGFVMGSAILVGGDPGIGKSTLLLQAAASLARQGKRV
IYISGEEAIAQVRLRAARLGVADAPVELASETHVETILATIEKGKAPDLVIIDSIQTCWT
ERVESAPGTVTQVRTSAQALTRFAKKSGSAVVLVGHVTKDGQIAGPRVVEHMVDAVLYFE
GDTSLTYRILRGVKNRYGATDEIGVFEMVGSGLREVPNPSALFLDQRDSGAAGSAVFAGV
EGTRPVLVEIQALVAPSPLGTPRRAVVGWDSSRLSMVLAVLETRCGVRIGANDIYLNVAG
GLKVNEPAADLAVAAALISSLTNSPLPADAVYFGEVSLSGGIRPVVHANLRVREAAKLGF
GSVHTAKLNASERTDGVALNEFSALAELVGRIAAAGERNMAEAD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaattgaaatccagctatgtctgccaatcctgcggcaacgtgacccctcgctgg
gcggggcggtgcgaggcgtgcggggagtggaactccatcgtcgaggaggtcgcgacctcc
ggcgtgggggccgggcccaaggctgcggtggcatcggggcgcccggtggaactggtgccg
ctttccggggaaagcgaagacgcgatccgcatcgagagcaagaatggcgagttggaccgc
gtgctgggtggcgggttcgtcatgggttcggcgatcctcgtgggtggcgatccggggatc
ggcaaatccacgctgctgttgcaggcggccgcttcgctggcgcggcagggcaaacgggtg
atctatatttcgggcgaagaggctattgcgcaggtgcggctgcgcgccgctcggctcggc
gtcgccgatgcgccggtggaactggccagcgaaacccatgtggagaccatcctcgccacc
atcgaaaagggcaaggcgcccgatctggtgatcatcgattccatccagacctgctggacc
gaacgggtggagagcgcgccgggcacggtgacgcaggtgcgcacctcggctcaggcgctg
acacggtttgccaagaaatcgggttcggcggtggtgctggtggggcatgtcaccaaggac
gggcagatcgccggaccgcgggtggtcgagcacatggtcgatgcggtgctttatttcgag
ggcgatacctcgctcacctaccgcatcctgcgcggagtcaagaaccgctatggcgcgacc
gacgagatcggcgtgttcgagatggtgggctcgggtttgcgcgaagtgcccaacccctcg
gcgctgtttctggaccaacgcgattccggagcggcgggatcggcggtgttcgccggggtc
gagggcacgcgtccggtgctcgtggaaatccaggcgctggtggccccctccccgctcggc
acgccgcgccgggccgttgtgggctgggattcctcgcggctctcgatggtgctggcggtg
cttgaaacgcgatgcggggtgcggatcggggccaacgacatctatctcaacgttgcgggg
ggcctcaaggtcaacgagcctgccgccgatctggccgtggcggcggcgctgatttcctcg
ctcaccaattcccctctgcccgccgatgcggtctatttcggcgaggtcagcctttcgggc
ggcattcgcccggttgttcatgccaatctgcgggtgcgcgaggcggccaagctggggttc
ggatcggtgcatacggccaagctcaacgcctccgagcgcacggacggggtggcgctgaac
gaattttcggcgctggccgaactggtgggacggatcgcagcagcgggcgaacgcaacatg
gccgaagcggactga
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