Phycisphaera mikurensis: PSMK_04190
Help
Entry
PSMK_04190 CDS
T01800
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm00521
Streptomycin biosynthesis
phm00523
Polyketide sugar unit biosynthesis
phm00541
O-Antigen nucleotide sugar biosynthesis
phm01100
Metabolic pathways
phm01110
Biosynthesis of secondary metabolites
phm01250
Biosynthesis of nucleotide sugars
Module
phm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PSMK_04190 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PSMK_04190 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PSMK_04190 (rmlC)
Enzymes [BR:
phm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PSMK_04190 (rmlC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BAM02578
UniProt:
I0IBE0
LinkDB
All DBs
Position
461194..461775
Genome browser
AA seq
193 aa
AA seq
DB search
MHVTPLSPPGLLRLVPPRFGDGRGWFCTVYAAETLAGLGIGEAFVQDSVSFSERAGTVRG
LHFQRPPHGQGKLVRVVRGRIRDVSVDLRVGSPAYGEHAAVELAAEGGEQVWVPPGFAHG
FVTLEDATEVHYKSTAAWAPASEGGLAFDCPALGIDWGVTRAEAVLSERDRELPGFAGFE
SPFRPGAEAARDR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcaccccgctctcgccgccgggcctcctgcggctcgtgccgccccgcttcggt
gacgggcggggctggttctgcaccgtctacgccgcggagacgctcgccggcctgggcatc
ggcgaggccttcgtgcaggacagcgtgagcttctccgagcgggccggcacggtgcgcggg
ctgcatttccagcgtccgccgcacgggcagggcaagctggtccgcgtggtccgcggtcgg
atccgcgacgtttcggtcgacctgcgggtcggctcgcccgcctacggcgagcacgcggcg
gtggagctcgcggcggagggcggcgagcaggtgtgggtgcccccggggttcgcgcacggc
ttcgtgacgctcgaagacgccacggaggttcactacaagagcaccgcggcctgggcgccc
gcctccgagggcggcctcgccttcgactgcccggcgctggggatcgactggggcgtcacc
cgggcggaggcggtgctctccgagcgggaccgcgagctgccgggcttcgccggcttcgag
agccccttccgccccggagccgaggccgcgcgtgaccgctga
DBGET
integrated database retrieval system
