Phycisphaera mikurensis: PSMK_08040
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Entry
PSMK_08040 CDS
T01800
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
phm
Phycisphaera mikurensis
Pathway
phm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSMK_08040 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phm01007
]
PSMK_08040 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phm03016
]
PSMK_08040 (valS)
Enzymes [BR:
phm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
PSMK_08040 (valS)
Amino acid related enzymes [BR:
phm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PSMK_08040 (valS)
Transfer RNA biogenesis [BR:
phm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PSMK_08040 (valS)
Prokaryotic type
PSMK_08040 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1_2
ATG16
Motif
Other DBs
NCBI-ProteinID:
BAM02963
UniProt:
I0ICH5
LinkDB
All DBs
Position
complement(931329..934580)
Genome browser
AA seq
1083 aa
AA seq
DB search
MQNDLTELPPQYDPAGNEAEVTRKWAEADAFRADPEAPGEPFSVCIPPPNVTAALHLGHA
LNNTIQDVLVRHARMKGRNAVWLPGTDHAGIATQTVVDRRLQAEGERALKEYKLEEAQKP
GSGRGAFVAKVQAWKDRYEETITEQLKAMGCSCDWSRQAFTMDEPRSEAVREAFYRLFRD
GLIYRGKRLVNWDPVSQTALADDEVEMEEVDGNFYHLVYPVVDEQGEPTGETLTVATTRP
ETMLGDTAVAVNPDDPPRAAFIGKRVRLPIVGRIIPVIGDGYVVIPDPDSADAKAKLSTG
FLKVTPAHDPNDYLIGQRHGLPVVNVMAPDASISKDHGWDDFQACDGDALQPFLGLSRED
ARTAIVKRFKDLGLCPAVIPHRHAVGHSYRSHAAIEPYYSDQWYLAVTDDRLKGAALRAM
DPSQRQATGDAAFGSAPEPAATGLTFTPARYAKTFQAWHEGLRDWCISRQLWWGHRIPVW
SARMSFRELADLLADDVSGQDLFFGEGEDVFVRATYSEGPMVDFTTGNLGIEQLAELASR
TEDAPAQWYVCVSESAGEEVPRWLDAAGFAQDPDVLDTWFSSALWPLSTLGWPAASSDLE
RWNPTSVLTTAREIITLWVSRMVMFNVYFEGRLPFQDVFIHAMIQDGFGQKMSKSLGNGV
DPLDIIQSHGADAMRFTLASMTTHTQDVRLPVDMLDPHTGEAFQPEVFTNQAGFKVSKPV
QERRGRAFVSSYGAASGEATPTDDRPLARNTSSKFDLGQRFANKLWNATRFTLQIVAEAD
DAAAEAPRAITGGSRDGLGLAERWILSRLARTVHAADDALARYAFAEYAAAVYDFVWRDL
CDWYIEAVKPTARGNAHQRRVLLTCFDAALRLCHPAMPFVTERLFAALHAAVPGEKSVDG
LELPGSPLLCTAGWPVAASVLVDEEAERDFGLIQEVVGAVREVRQRHGLPPRQKLEISSA
VPHELAARMMPHRHLAETLGHYQGRDFGPGVEPPKGAETVLVAGSKMFLHGLGADPEKER
KRLAAEAADAGESIAQLRGRLANDKYTARAPAKLVQETRDQLAAAEARLATIEAQAAALE
RTG
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgacttgaccgagctacccccgcagtacgacccggccggaaacgaggcggag
gtcacgcggaagtgggccgaggcggacgcgttccgggccgatcccgaggcgcccggcgag
cccttcagcgtgtgcatcccgccgccgaacgtgacggcggcgctgcacctgggccacgcg
ctcaacaacacgatccaggacgtcctcgtccgccacgcccggatgaaggggagaaacgcc
gtgtggctgccgggcaccgaccacgcgggcatcgcgacgcagacggtggtcgatcggcgg
cttcaggccgagggcgagcgggcgttgaaggagtacaagctcgaagaggcgcagaagccc
ggctccgggcgcggcgccttcgtcgcgaaggtgcaggcctggaaggaccgctacgaggaa
accatcaccgagcagctgaaggcgatgggctgttcgtgcgactggtcgaggcaggcgttc
acgatggacgagccccgcagcgaggcggtgcgcgaggccttctaccggctgttccgcgac
ggcctgatctaccgcggcaagcggctggtgaactgggacccggtgagccagaccgcgctc
gccgacgacgaggtggagatggaggaggtggacgggaacttctaccacctcgtctacccg
gtggtggatgagcaaggcgagccgaccggcgagaccctgacggtcgcgacgacgcggccg
gaaacgatgctcggcgacaccgcggtggcggtgaaccccgacgacccgccgcgggcagcg
ttcatcggcaagcgcgtgaggctgccgatcgtcggccggatcatcccggtcatcggcgac
ggctacgtggtgatccccgaccccgattccgccgacgcgaaggcgaagctgtccaccggg
ttcctgaaggtcaccccggcgcacgaccccaacgactacctcatcgggcagcgccacggc
ctgccggtggtcaacgtgatggcccccgacgcgagcatctccaaagaccacggctgggac
gacttccaagcgtgcgatggcgacgcgttgcagcctttcctgggcctctcccgcgaggac
gcgcggacggcgatcgtcaagcgcttcaaggacctgggcctctgccccgcggtcatcccg
caccgccacgccgtgggccacagctaccgcagccacgcggcgatcgagccttattacagc
gaccagtggtacctggcggtgaccgacgatcggttgaagggcgcggcgctgcgggcgatg
gatccctcgcagcggcaggcgaccggggacgcggcgttcggcagcgcccccgagcccgcc
gcgaccgggctcaccttcaccccggcccgctacgcgaagacgttccaggcctggcacgag
gggctgcgggactggtgcatctcgcggcagctgtggtgggggcaccggatcccggtgtgg
tcggcgaggatgtccttccgcgagctggccgacctgctggcggacgacgtgagcgggcag
gacctcttcttcggcgagggcgaggacgtcttcgtccgggcgacctattccgaagggccg
atggtcgacttcaccaccggcaacctgggcatcgagcagctcgccgagctggcgagccgc
accgaggacgcgccggcgcagtggtacgtctgcgtcagcgagagcgccggcgaggaggtg
ccgcggtggctcgatgccgccggcttcgcgcaggaccccgacgtcctggacacctggttc
tcctccgccctctggccgctgtccacgctgggctggcccgctgcatcctccgacctggag
cgatggaacccgacgagcgtgctcacgacggcccgcgagatcatcacgctgtgggtctcg
cggatggtcatgttcaacgtctacttcgagggtcggctcccgttccaggacgtcttcatc
cacgcgatgatccaggacggcttcgggcagaagatgagcaagagcctcggcaacggcgtc
gacccgctggacatcatccagagccacggcgcggacgcgatgcggttcaccctcgcgtcg
atgaccacgcacacgcaggacgtccgcctgcccgtggacatgctcgacccgcacaccggc
gaggccttccagccggaggtgttcaccaaccaagccggcttcaaggtgtcgaagccggtc
caggagcgtcgcggccgggccttcgtcagcagctacggcgccgcctcgggcgaggcgacg
ccgaccgacgaccgcccgctcgcgaggaacaccagctcgaagttcgacctgggccagcgc
ttcgccaacaagctctggaacgcgacccgcttcacgctgcagatcgttgccgaggcggac
gacgccgcggccgaagcgccgcgggcgatcaccggcggcagccgcgacggcctcgggctt
gccgagcggtggatcctctcgcggctggcgcggaccgtgcacgccgccgacgacgcgctc
gcccgctacgccttcgccgagtacgcggcggcggtttacgacttcgtctggcgcgacctc
tgcgactggtacatcgaggcggtgaagcccacggcgcgtggcaacgcgcaccagcggcgc
gtgctgctgacctgcttcgacgcggcgctgcggctgtgccacccggccatgcccttcgtg
accgagcggctcttcgccgcgctgcacgccgcggtgccgggggagaagagcgtggacggg
ttggagctccccggttcgccgcttctgtgcacggccggctggccggtcgccgcctcggtg
ctggtcgacgaggaggccgagcgggacttcggcttgatccaggaggtggtcggcgcggtc
cgcgaggtgcggcagcggcacgggctgccgccgcggcagaagctggagatctccagcgcc
gtcccccacgagctcgccgcgcggatgatgccgcaccgccacctcgccgagacgctgggc
cactaccagggccgcgacttcggccccggcgtcgagccgcccaagggagccgagacggtg
ctcgtcgccggctcgaagatgttcctccacgggctcggggcggaccccgagaaggagcgg
aagcggctcgccgccgaggccgccgacgcgggcgagtcgatcgcccagctgcgtgggcgc
ctcgccaacgacaagtacacggcgcgagccccggcgaagctggtgcaggaaacccgcgac
cagctcgcggcggcggaggcgaggctggccacgatcgaggcacaggcggcggctctcgag
cgaaccggctga
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