Pseudomonas hormoni: KJF94_19840
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Entry
KJF94_19840 CDS
T09556
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
phom
Pseudomonas hormoni
Pathway
phom02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KJF94_19840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phom03021
]
KJF94_19840
Transcription machinery [BR:
phom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KJF94_19840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
GerE
Sigma70_ECF
HTH_28
HTH_24
KorB
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QVW22114
LinkDB
All DBs
Position
complement(4254277..4254810)
Genome browser
AA seq
177 aa
AA seq
DB search
MSGTDLSHRTDVGGLFRAHYPWLCARLRRHLGASSSVEDIAAETFAQLLESPGLTPIREP
RALLTTIAHRLIYQLWRRRDLERQHLDQLQHLDQPQASSPEELLQLTQALHGLDRTLQRL
PGKVRATFLLSRIDGLTYPQIAAELGISQRSVSVYMTRSQALCAQHSANEPLHQRSA
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaccgacttatcccatcgcaccgacgtgggcggattgttccgcgcccattac
ccctggctgtgcgctcggttgcgacggcatctgggggccagttccagcgtcgaagacatc
gccgccgaaaccttcgcgcaactgctcgaatccccggggctgaccccgattcgcgagccg
cgcgcgctgctcaccaccatcgcccaccggctgatttaccagctctggcgtcgccgtgat
ctggaacgtcagcacctcgatcaactacaacacctcgatcagccgcaggcgagttcgccc
gaggagctgctgcaactgacccaggcgttgcatggcctcgaccgaacgcttcagcgcttg
ccgggcaaggtccgggcgacgttcctgttgtcgcgaatcgatggcctgacctacccgcaa
attgctgccgagctgggcatatcccagcgctcggtcagtgtctacatgacccgctcccaa
gcgttgtgcgcccagcacagcgccaatgaacccttgcaccagaggtccgcatga
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