Phaeobacter porticola: PhaeoP97_01135
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Entry
PhaeoP97_01135 CDS
T04595
Symbol
rhlE2
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
php
Phaeobacter porticola
Pathway
php03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
php00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PhaeoP97_01135 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
php03019
]
PhaeoP97_01135 (rhlE2)
Enzymes [BR:
php01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PhaeoP97_01135 (rhlE2)
Messenger RNA biogenesis [BR:
php03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PhaeoP97_01135 (rhlE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Helicase_RecD
AAA_19
SUa-2TM
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
APG46561
UniProt:
A0A1L3I381
LinkDB
All DBs
Position
complement(1147310..1148647)
Genome browser
AA seq
445 aa
AA seq
DB search
MTEFSTMGLPEQLLKRIADLGYTDPTPIQAHAIPHALNGKDVLGLAQTGTGKTAAFGIPL
IAQMMQYGQKPAPKTVRGLVLAPTRELANQIAANLKALTEGTPMKTGLVVGGVSINPQIA
RIAKGTDILIATPGRLLDILDRRALDLSSCDFLVLDEADQMLDLGFIHALRKIASLLPEQ
RQTMLFSATMPKQMNEIANSYLQSPIRIEVNPPGKAADKITQSVHFIAKAEKLSMLKEQL
RAIDGERTLVFGRTKHGMEKLMKTLSAAGFSAAAIHGNKSQGQRERALAQFKSGQVTILV
ATDVAARGLDIPDVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCSPDEMGELKAI
QKTMGITIPTASGRPWEVLPDPKAPAGRRGGGGGGKPGGSGKPGGHRRRRSGGGGGGQGG
ARSGGQGAGQGGGQGKPGGQRRRAQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaattttcgacaatggggctgcccgagcagcttctgaagcgcattgcagacctt
ggttataccgacccgacgcccatccaggcgcacgctattccgcatgcactgaacggcaaa
gacgtgctgggtctggcgcaaaccggcaccggcaaaaccgccgcctttggcattccgctg
atcgcacaaatgatgcaatacggccagaaacccgctcctaagaccgtccgtggtctggta
ctggccccaacccgcgagctggccaaccagatcgccgcaaaccttaaggcgctgaccgaa
ggcaccccgatgaaaaccggccttgtggttggtggtgtgtcgatcaacccgcagatcgcc
cgtattgccaaaggcaccgatatcctgattgccacgccgggacgtcttttggacatcctc
gaccgacgcgccctggatcttagctcctgcgacttccttgttctggacgaggccgaccag
atgctggacctcggttttatccacgccctgcgcaaaatcgcatccctgctgcccgaacag
cgccagaccatgctgttttcggcgaccatgcccaagcagatgaacgagattgccaattcc
tatctgcaaagccccatccggattgaggtgaaccctcccggcaaggcggccgacaagatc
actcaatcggtgcatttcatcgccaaggccgaaaagctgtcgatgctgaaagagcagctg
cgcgcgatcgacggcgaacgcacattggtctttggccgcaccaaacatggcatggaaaag
ctgatgaagaccctgtccgccgcagggttctccgccgcagcgatccacggcaacaaaagc
cagggccagcgcgagcgcgctttggcacagtttaaatccggtcaggtcaccatccttgtc
gccaccgatgtggcggcccgtggtcttgatatcccggatgtgaaatacgtctataactac
gaactgcccaatgtgccggacgcctatgtgcaccgcatcggccggaccgcacgcgcgggc
aaggacggtcaggccgtggccttctgttccccggacgagatgggcgaactgaaagccatt
cagaaaaccatgggcatcaccatcccgaccgcttccgggcgtccgtgggaagtgctgccc
gatcccaaggcccccgccggtcgtcgcggtggcggcggtggcggcaagcccggcggcagc
ggcaaacccggtggtcatcgtcggcgtcgcagcggcggcggcggtggcggccaaggtggt
gcgcgcagcggtggtcagggtgctggtcagggcggcggtcagggcaaacccggcggtcag
cgccgccgcgcccagtaa
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