Phaeobacter porticola: PhaeoP97_01978
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Entry
PhaeoP97_01978 CDS
T04595
Name
(GenBank) DNA polymerase III, chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
php
Phaeobacter porticola
Pathway
php03030
DNA replication
php03430
Mismatch repair
php03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
php00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PhaeoP97_01978
03430 Mismatch repair
PhaeoP97_01978
03440 Homologous recombination
PhaeoP97_01978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
php03032
]
PhaeoP97_01978
03400 DNA repair and recombination proteins [BR:
php03400
]
PhaeoP97_01978
Enzymes [BR:
php01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PhaeoP97_01978
DNA replication proteins [BR:
php03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PhaeoP97_01978
DNA repair and recombination proteins [BR:
php03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PhaeoP97_01978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
DUF6680
Motif
Other DBs
NCBI-ProteinID:
APG47386
UniProt:
A0A1L3I5J8
LinkDB
All DBs
Position
complement(2028404..2028868)
Genome browser
AA seq
154 aa
AA seq
DB search
MGAAYFYHLTRRSLEETLPVLLDKALGAGWRIVVRAQDQQRIARLDERLWLGAEDQFLPH
GLVGGPHDALQPVLLSHETTPVTGTSCLMTVDGAEVTAEEVTALERVCILFDGTSPDAVA
RARVQWKSLTDAGCSAQYWSEESGRWEKKAEKTA
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggcctatttctatcacctgacccggcgttcgctagaagagacgctgccggtc
ctcctcgacaaggcgcttggcgccgggtggcgcattgttgtgcgcgcgcaggaccagcag
cggatcgcacgtctggacgaacgcttgtggctgggggcggaggatcagtttcttccccat
ggtctggttggcggcccccatgacgcgcttcagcctgtcctgctcagccatgagaccacg
ccggtgaccggcaccagctgcctgatgacggtggatggcgcggaggtcacggcggaagag
gtgacggcgctggagcgtgtctgcatcctgtttgacggcaccagcccggacgcggtggcc
cgcgcacgcgtgcaatggaaatccctcactgatgcggggtgctcagcgcaatattggtcc
gaagagagcgggcgctgggaaaaaaaggccgagaaaaccgcctaa
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