Pediculus humanus corporis (human body louse): Phum_PHUM080480
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Entry
Phum_PHUM080480 CDS
T01223
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
phu
Pediculus humanus corporis (human body louse)
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phu03009
]
Phum_PHUM080480
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Phum_PHUM080480
Ribosome biogenesis [BR:
phu03009
]
Eukaryotic type
90S particles
Helicases
Phum_PHUM080480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C12
DEAD
Helicase_C
UCH_C
ResIII
P-loop_SecA
AAA_19
NACHT
Motif
Other DBs
NCBI-GeneID:
8231390
NCBI-ProteinID:
XP_002423722
VectorBase:
PHUM080480
UniProt:
E0VC78
LinkDB
All DBs
AA seq
1130 aa
AA seq
DB search
MPVDITKLTEGWLELESDPGLFMLLLEDFGVKNVQVEEIYDITKPFDGPVYGFIFLFRWI
EERRSRRKLFDQNDMFLKEEEVVNNIFFAQQMVPNSCATHALLSVLLNCPKIHLGDTLTR
LKAHTVGMTPENKGWAIGNTPELARAHNSHAMPQAKRCVDKSSVSAGMTSSRYAGEAFHF
VSYVPIQERLFELDGLKPYPIDHGPCENNEAWTEKFRRVMTERLGVAGGEPCHDIRFNLM
ALIPDRRIALSHKLNMLKTNREIVVTALQQLVHLNSESKKLENYKEEHESFKTNSSDLGS
NSSLTESEAAIINDLKLDKMGNENNMWKKSDDNCLKDNLVEGSQFSEHAESDTNVHHEIN
VSKNHADTLSSIKSNLQSSSKENIEPAFNIDKKGALNINSDYSLPLTIETSPTPSISGTD
TSSDVGSVFNSPSTMGWGCNSCQSSPCPKDYKKYLMQSDEKTDSLSGTSSSSLLGKKTNS
QSPSYREDSKAESPTCSTLLETDSNKEKDCKPEDTDAMKALLSKYPVLREPHTFAPKDLL
ALLKNVESEIANCEASLKDENDKRTKYKIDDCRRTHNYDEFICTFLSMLAEQGKLADLVE
QHLHKRPGIPLHRLKRPHPIKKSDTNKTAGRLNIKEEPTDIINSETVTDTFINENDLDII
KDEGDAATDENNFTVNNNNNNNSQPLELLKGLSTDNIRRKEEKEGKRKKKKNVTSIEVYN
KQQEEKLAEARNKLKVSVIGTNVPWPLENFNELITRFHVSPNIVKNLENSGYNNPTPIQA
QAIPAMLEGRQVLACAPTGSGKTAAFLVPIFYHLKGPTKKGYRCVIVCPTRELARQTYRE
CLRLSEGTRLKINIIKKVTLDKENYSNTSKKFDILITTPNRLVYLLKQEPPKVNLKSVEW
LIVDESDKLFEAGIRGFRDQLAVIYNACDSSVIKRAMFSATQTPHLTKWCRRNLKNLVLI
NVGVRNSAVETVKQELLFVGCEAGKLVAFRNLINRGLTPPVLVFVQSKERAQELFNELVY
DGINVDVIHSDRTQKQRDNVIRSFREGKIWVLICTELMGRGIDFKGVNLVVNYDFPPSSV
SYIHRIGRTGRAGRPGRAITYFTQDDTHCANNEKCRLRSTRIHALDEKIK
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgatataacaaaattaacagaaggttggctagaattggaaagtgatcctgga
ttatttatgcttttattagaagatttcggtgttaaaaacgttcaagtcgaagaaatatac
gatataacgaaaccatttgacggacctgtttatggttttatatttctctttcgatggata
gaagaaagacgttcaagaagaaaattattcgatcaaaatgacatgtttttaaaagaggaa
gaagtggttaataatattttctttgctcaacaaatggtacctaatagctgtgctactcat
gctttactctccgttcttcttaattgtcccaaaatacatttgggtgatactttaacgcgt
ttgaaagcgcatactgtgggaatgactccagaaaataaaggttgggcaattggaaacact
ccagaattggctagggctcacaattctcatgccatgccacaagcaaaacgatgtgtagat
aaaagttctgtatctgctggcatgacttctagtagatatgctggagaggcttttcatttt
gttagttatgttccaattcaagaaaggctttttgaattggatggccttaaaccatatccc
attgatcatggtccgtgtgaaaataatgaagcctggacggaaaaattcaggagagttatg
actgaaagacttggagttgctggaggagaaccatgccatgacattagatttaatttaatg
gcattgattcctgacagaagaattgctctgtcgcacaaattaaatatgcttaaaacaaat
agagaaattgtcgtgactgctctccaacaattggtacacctgaattccgaatcaaaaaaa
ttagaaaattacaaagaagagcatgaatcttttaaaaccaattcatctgatttaggatct
aattcatctcttacagaaagtgaagcagctataataaatgacttaaaattagacaaaatg
ggaaatgaaaataatatgtggaaaaagtctgacgataattgtttaaaagataatttagtc
gaaggttctcagttttctgaacatgcagaaagtgatactaatgtacatcatgaaataaat
gtatctaaaaatcatgcagatactttatcaagtataaaaagtaatttgcagtcatcttcg
aaggaaaacatagaacctgcatttaacatagataagaaaggagcattaaatatcaattct
gattattctttgccattgacgatagaaacatcaccaactccgagcatctctggaactgat
acatcttccgatgtaggttcagtgttcaattcgccttcaacaatgggctggggttgtaat
tcctgtcaaagcagtccatgtcctaaagactacaagaaatatttaatgcagtcagatgaa
aaaactgattcactttctggtacatcaagttcatcgcttttaggaaaaaagacgaatagt
caatcaccttcctatagagaagacagcaaagctgaatctccaacttgttcgacattattg
gaaacagattctaataaagaaaaagattgtaaacctgaagatactgatgctatgaaagca
cttttatcgaaatatcctgtactcagagaacctcatacatttgcaccgaaagatttgtta
gcattgttgaaaaatgtcgaatcagaaattgccaattgtgaagcatctttaaaagatgaa
aatgataagagaacaaagtataaaattgacgattgcagaaggactcacaattacgacgaa
tttatttgcacgtttttatctatgcttgctgaacaagggaaactggccgacttggtcgag
cagcacctacacaaaagacctggtataccattacacaggctcaaaagacctcatcctata
aaaaaatcagatactaataaaacagcaggaagactgaatatcaaagaagaacccacagat
attataaatagtgaaacagtgacagatacattcataaatgaaaatgatttggatatcatc
aaagatgaaggagatgctgcaacagatgaaaacaatttcacagtaaacaataataataat
aataattcacagccattagaacttttaaaaggtttatcaacggataacataagaaggaaa
gaagaaaaagaaggaaaaagaaaaaagaaaaaaaatgttacgagtatagaagtttataat
aaacaacaagaagaaaagctagctgaagcaagaaataaactcaaagtatcagtcattgga
acaaacgttccatggcctttggaaaatttcaacgaattaattactagatttcacgtgtca
ccaaatatcgtcaaaaatttagaaaattccggatacaataatccgactcctattcaagct
caagccattccagccatgttggagggtagacaagttttggcttgcgcgcctaccggatcg
ggtaaaacggctgcttttctcgtgcccatattttaccacctcaaaggacccacgaaaaag
ggttacaggtgcgtcattgtttgtccgacaagagaattagcccgtcaaacttacagagaa
tgcctgcgtttgagcgaagggacgagattgaaaatcaacataataaaaaaagtaactctc
gacaaggaaaactattctaacacttcaaaaaagtttgacatactaataacaactcctaat
cggttggtgtatttactaaaacaggaacctcctaaagtcaatttaaaaagtgtcgaatgg
ttgattgtggacgaatcggataaattattcgaagctgggattcgtggatttcgagatcag
ttggcggttatttacaacgcttgcgattcgtccgttataaaacgcgccatgttttccgcg
actcaaactccgcatttgacaaaatggtgtcgaagaaatttgaaaaatttagttttgatc
aacgtgggagtgagaaattctgcggttgaaacggttaaacaagaattgctttttgtcgga
tgcgaagcagggaaacttgtcgcatttagaaatttaatcaacagaggactcactccaccc
gttttggttttcgtacaatcgaaggaaagagctcaggaattattcaatgaattagtttac
gatggaattaacgttgacgtcatacattccgacaggacgcaaaaacagagagacaacgtg
attcgaagctttagagagggtaaaatttgggttttaatttgtaccgaattaatgggtcga
ggtatagattttaaaggagtcaatcttgttgtcaattatgactttcctccgagttctgtg
tcttatatccacagaatcggacgtacaggtagagctggaagacccgggagagcgataact
tatttcacacaagacgatacacattgcgcgaataatgaaaaatgccggttgcgaagtacc
cgaatacatgctctcgatgaaaaaatcaaataa
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