Pediculus humanus corporis (human body louse): Phum_PHUM169850
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Entry
Phum_PHUM169850 CDS
T01223
Name
(RefSeq) TFIIH basal transcription factor complex p44 subunit, putative
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03022
Basal transcription factors
phu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Phum_PHUM169850
09124 Replication and repair
03420 Nucleotide excision repair
Phum_PHUM169850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phu03021
]
Phum_PHUM169850
03400 DNA repair and recombination proteins [BR:
phu03400
]
Phum_PHUM169850
Transcription machinery [BR:
phu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Phum_PHUM169850
DNA repair and recombination proteins [BR:
phu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Phum_PHUM169850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Zn-ribbon_8
VWA
Motif
Other DBs
NCBI-GeneID:
8236679
NCBI-ProteinID:
XP_002425024
VectorBase:
PHUM169850
UniProt:
E0VFY0
LinkDB
All DBs
AA seq
401 aa
AA seq
DB search
MEEEESKEYRWETGYEKTWEAIRDDEGGRIEEASVNEIIEKEKRKRQELKTGNRRLGLMR
HVYLIIDCSEAMLDQDLSPNRQLCTVKLLEGFIDEFFEQNPIAQMGVIITRNKRAEKLSD
LAGVSKRQKEIIKSIGDLACTGQPSLQNALELAGKSLKLRPTHASREVIAIIANLTTCDP
GNVADTIRFMKEENIRCSVIGLAAEVYVYKTLTKETKGTYSVILDDVHFKNQLFQQIDPP
AMTSNLSASLIKMGFPHHSLHDDKSSLGLCMCHLDDSEVKLKSDGYKCPQCAAKYCELPV
ECKVCSLTLVSAPHLARTFHHLFPVQSFERFDGKNAEGYCFGCQKKFSEGDTYLYKCNKC
EQRFCGVCDIFVHDSLRTCPGCATNPLLFQNKTAASFNAIT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaagaaagtaaagaataccgttgggagaccggttacgaaaaaacatgggaa
gcaataagggacgatgaaggaggtcgcatagaagaagcttcagtaaatgaaatcattgaa
aaagaaaagagaaagagacaggagttaaaaacaggaaacaggcgattgggattgatgaga
catgtttatttaataatagattgttcagaagcaatgttagatcaagacctgagtccaaat
agacaattatgtacagtaaaacttttagaagggtttattgatgaattttttgagcaaaat
ccaatcgcacagatgggtgttattatcacaagaaataaaagagctgaaaaattgagtgat
ttggctggagtttcaaaaagacaaaaagaaataattaaaagtataggagatttggcttgt
acaggacagccatctttgcaaaatgctttggaattagctggaaaatcattaaaattaaga
cccacacatgccagtagggaagtcattgcaatcatagctaatctgactacttgtgatcct
ggtaatgtagctgatactattaggtttatgaaagaagaaaacattcgatgctcagttata
ggattggctgctgaagtatatgtttataaaactttaaccaaagaaaccaaagggacttac
agtgttattttagatgatgttcatttcaagaatcaattatttcaacaaatagatccacct
gcaatgacaagtaatttgagtgcatcattaataaaaatgggttttcctcatcattcattg
cacgatgacaaatcttcattaggattgtgcatgtgccatttagacgactccgaggttaaa
ttaaaatcggatggatacaagtgtccacaatgtgcagccaaatattgcgaacttcctgtc
gaatgtaaggtatgcagtttaacattagtgtctgctccacatctagccagaacttttcat
caccttttcccggttcaaagttttgaaaggttcgatgggaaaaatgctgaaggttactgt
ttcggatgccaaaaaaaattttccgaaggagatacatatttatacaaatgtaacaaatgc
gagcaaagattttgcggcgtctgcgacatatttgttcacgattcacttagaacgtgtcct
ggatgtgcaacaaatccacttttatttcaaaataaaaccgccgcatcatttaacgcaatc
acctaa
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