Pediculus humanus corporis (human body louse): Phum_PHUM592850
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Entry
Phum_PHUM592850 CDS
T01223
Name
(RefSeq) DNA ligase, putative
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Phum_PHUM592850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phu03400
]
Phum_PHUM592850
Enzymes [BR:
phu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Phum_PHUM592850
DNA repair and recombination proteins [BR:
phu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
Phum_PHUM592850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
RNA_ligase
BRCT_2
DNA_ligase_IV
LIG3_BRCT
mRNA_cap_enzyme
Arrestin_C
Motif
Other DBs
NCBI-GeneID:
8232803
NCBI-ProteinID:
XP_002432567
VectorBase:
PHUM592850
UniProt:
E0W2H3
LinkDB
All DBs
AA seq
891 aa
AA seq
DB search
MSLAKKISFGNFCQLCSKIKSADHEKKIIILRNYISNWKKKAKDIESDGLNLDDSFFPIF
RLLIPHLDRERGAYGIKERTLAKIYISILSLPKDGEDALKLLNCKNPKTSYFNNCDFASI
AFCILRNRCAEGGQLSVEEVNKHLDKISTSHAANEPRNVDAELISLLKSTNAEEQKWLIR
ILLKDVKLGLSENVIFKCYHPDARELYDSSNSLRKICDLLNDPEIRLNEIQIQLFTPFKP
MLSEECDIQKIDYYLKRSCHFFIETKLDGERFQLHFEEGNFKYFSRNGYDFTTNFGSSKR
EGNLSPRIFKRIPPHVKSFVLDGEMMSWDRITRSFSSKGKNLDVKNLKEGNHYQSCFCVF
DILLYNGEVLTNKPLIARLEILEKIIEPEEGTIIILNRKQISSNSEVIDSLNEAIDNREE
GIVMKESMSVYKPNVRKNGGWYKIKPEYTDGLAETLDLLIIGGYYGRGHLKGSVNHFLLG
AAVNVSDDNILFYSTGRVGSGYSIKDLEDLSLKLKPYWKEAKNDRMPLSVKWGKEKPDVW
IKPDKSYILEIKASEIVSSAIFKSGYALRFPRVEKIRYDKTWKECLTLHNLEEIAKIASG
KLTASHFSQSNIPSFLPKKKAKTSIWNINSENFDFSGIKCISKLLQGKEICVFSGFKNIK
KLDLEKKVVEFGGKLVKNPGKNTFCILAESDNHTRIKNIIKCGSYDILYSSCFFSFLKIE
NVKMPKLKPEHFLAMSKGTKEEFSKSYDKYGDHFTKKSTFDAIKHSLNAASQEGKNIVLT
SDEIYEMDVNLFGKTSPYSIFRNHVGYFDQFKIVSDSSSKFSSDLDLFKIDFRFYGGKCS
DAIDDSTVTHVITLSSDSSRINEINNENHKRKRKFHVVNEKWIESCIKENA
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggctaagaaaatttcttttggaaatttttgtcaattatgcagtaaaataaaa
tcagctgatcatgaaaaaaaaattattattcttcgtaattatataagtaattggaaaaaa
aaagccaaagatattgaaagcgatggattgaatttagatgatagttttttcccaattttt
aggttattaatacctcatttagacagagaaaggggggcttacggtataaaagaacgaacg
cttgcaaaaatttacatttccattttatcattaccaaaagatggagaagatgctttaaaa
ttgttaaattgcaaaaatccaaaaacttcatattttaataattgtgattttgccagtatt
gcattttgtatattacgaaatcgttgtgcagaaggaggacaattatcggtggaagaagta
aacaaacatttggataaaatatcaaccagtcatgcagcaaatgaaccccgaaatgttgat
gctgaacttatatcattgctaaaatcaacaaatgcagaagaacaaaaatggctaattcga
attctcctcaaagatgttaaattgggactgagcgaaaatgttatttttaagtgctatcat
ccggatgctagagaactatacgattccagtaacagtttgagaaaaatatgcgacctccta
aatgatcccgaaattcgccttaatgaaattcaaatacagttgtttactccttttaaaccg
atgctttccgaagaatgtgatattcagaaaatagattattatttaaaacgctcttgtcat
ttttttattgaaactaaattagatggtgaaaggtttcaacttcacttcgaagaaggaaat
tttaaatatttttccaggaatggatacgattttactacaaattttggaagttccaaacgc
gagggaaatttaagtcctcgtatttttaaaagaattcctcctcacgtgaaatctttcgtt
ttagatggtgaaatgatgagttgggacagaataacgcgatcttttagttccaaaggcaaa
aatttagatgtaaaaaatttgaaagaaggaaatcattatcaatcttgtttttgcgtgttt
gacatattattatacaatggtgaagtattaacgaataaacccctgattgcccgtttagaa
attctggaaaaaataatcgaaccggaagaaggaaccataattattttaaatagaaaacaa
atttcgtctaattcagaagtcattgattcattgaatgaagccatcgataatagggaagaa
ggaattgttatgaaagaatccatgtcagtttacaaaccaaatgttcgaaaaaatggcgga
tggtataaaataaaaccggagtacacggatggtttggcggaaactttagatcttttaatt
attggtggctattacggaagaggtcatcttaaaggaagcgttaatcacttcttactcggt
gcagccgtaaatgtttcggacgataatattttattttattctactgggcgagtaggatcc
ggttattcaataaaagatctcgaagatctttctcttaaactgaagccatattggaaagaa
gcaaaaaacgatcgcatgccattaagtgtaaagtggggcaaggaaaaaccagacgtttgg
atcaaacctgataaatcatatattttagaaattaaagcttcggaaatcgtatccagtgct
attttcaaatcagggtacgcactacggtttcccagggttgaaaaaataaggtacgacaaa
acatggaaagagtgtttaactttacataatctagaagaaatagccaagattgcatcagga
aaattaacggcttcccattttagccaatcaaacattcctagttttttaccgaaaaaaaag
gcgaaaacgtctatttggaatatcaattctgaaaatttcgatttttccggcattaaatgc
atttcaaaacttcttcaaggcaaagaaatatgcgtgtttagcggttttaaaaatattaag
aaattggatttggaaaagaaagtcgtcgagtttggaggaaaattggttaaaaatccaggg
aaaaatactttttgcattttagccgaaagtgataatcacacgaggataaaaaatattatt
aaatgcggatcctacgacatactctattcttcctgttttttttcttttttgaaaatagaa
aatgtaaaaatgccaaaattaaaacccgaacactttttagccatgtcgaaaggaactaaa
gaagaatttagtaaatcgtacgataagtacggagatcattttacgaaaaaatcaactttt
gatgccattaaacattctctaaatgcggccagtcaagaagggaaaaatatcgttctcaca
agtgatgaaatttacgaaatggatgtaaatttattcggaaaaacgagtccttatagcatt
tttagaaatcatgtcggttatttcgatcaatttaaaatagtgtcagattcgagtagcaaa
ttttcaagcgatttagatttatttaaaattgattttcgattttacggaggaaaatgttca
gatgctatcgacgatagtacggtcacgcatgtgataactttaagtagcgattcgtctaga
ataaacgaaataaataatgaaaatcataaaagaaaaagaaaatttcacgtggttaatgaa
aaatggatcgagtcttgtataaaagaaaacgcataa
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