Peptacetobacter hiranonis: KGNDJEFE_00873
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Entry
KGNDJEFE_00873 CDS
T06633
Symbol
rsmB
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
phx
Peptacetobacter hiranonis
Brite
KEGG Orthology (KO) [BR:
phx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phx03009
]
KGNDJEFE_00873 (rsmB)
Enzymes [BR:
phx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
KGNDJEFE_00873 (rsmB)
Ribosome biogenesis [BR:
phx03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KGNDJEFE_00873 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Ubie_methyltran
FtsJ
Methyltr_RsmF_N
Methyltransf_25
Methyltransf_15
NSUN5_fdxn-like
DUF938
Motif
Other DBs
NCBI-ProteinID:
QEK20390
LinkDB
All DBs
Position
923520..924845
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AA seq
441 aa
AA seq
DB search
MNAREAAFKILCDIEIEKNYSNMAINKIFKNEKISDKDKGLATELVYGVIENRKYLDFII
NKLSKIKVKKMSSFVKIILRMGTYQILFLDKIEDHAAVNETVKLASKYDGKSKGFVNAIL
RNEIRQKRTIKYIDIEDPIRRLAVKYSYQQWIVEDWVKNFGIEFAEELLEALNERPDLYV
RTNTLKIDRNSLLKEFEKEGIKASKAMLPEEAIMVENFKGIESSRLYKEGLFTVQDISSM
LVAKVVAPKEGDMVLDMCSAPGGKSTHMAELMKNTGKIVSRDVFEHKIKVIKAAAKRLGI
TNIEAEEFDAANLDENSIEKFDCVLTDVPCSGLGIIRRKPEIKYKAKEELVDLPKIQSKI
LENASKYVKINGTLVYSTCTVQDCENIEVVEKFLKENPNYELVPIEGINVDPEEQEKGYI
KIYPNVHGMDGFFIAKMKRVK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaagagaggcggcatttaagattctttgcgatattgagatagagaaaaattac
tctaatatggcaattaataaaatttttaagaatgaaaagataagtgataaagataaaggg
cttgcgacagagcttgtttatggagttatagaaaatagaaaatacttagattttataata
aataaattatcaaagataaaagttaagaagatgtctagttttgttaagataattcttaga
atgggtacatatcagattttatttttagacaagattgaagaccatgcagctgttaatgag
acagttaagctggctagtaaatacgatggaaagtctaagggatttgtaaatgctatttta
agaaatgagataagacagaagagaactataaaatacatagatatagaggatccaatcaga
agattagctgttaagtattcatatcagcagtggatagtagaagattgggttaaaaacttt
ggtatagagtttgcagaggagcttcttgaggctttaaacgaaagaccagatttatatgtt
agaacaaatactttaaagatagatagaaattctcttttaaaagaatttgaaaaagaggga
attaaggcaagtaaggctatgttaccagaagaggctataatggttgagaactttaaagga
atagaaagctctagattatataaagagggactatttactgttcaggatataagttctatg
cttgtggctaaggtcgtagctcctaaggaaggcgatatggtattagatatgtgcagtgca
ccaggtggaaagagtactcacatggctgagcttatgaaaaacacaggaaagatagtatca
agagatgtttttgagcacaagattaaagtaataaaggcagctgcgaaaagactaggtata
acaaatatagaagctgaagaatttgatgcagctaatttagatgaaaatagtatagaaaaa
tttgattgtgtattaacagatgtgccttgttctggacttggaataataagaagaaaacca
gaaataaaatataaagctaaagaagaattggtagatttaccgaaaattcaaagtaaaata
cttgaaaatgcatctaaatatgttaaaataaatggaactttagtatattcaacttgtaca
gttcaggactgtgaaaatatagaagttgttgagaagttcttaaaagaaaatccaaactac
gaattagttccaatagaaggaataaatgtagatccagaggagcaggaaaaaggttatata
aaaatatatccaaatgttcatggaatggatggattctttatagcaaaaatgaaaagagtt
aaataa
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