Pseudomonas hygromyciniae: JTY93_06235
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Entry
JTY93_06235 CDS
T09404
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg01501
beta-Lactam resistance
phyg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JTY93_06235
01503 Cationic antimicrobial peptide (CAMP) resistance
JTY93_06235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyg02000
]
JTY93_06235
01504 Antimicrobial resistance genes [BR:
phyg01504
]
JTY93_06235
Transporters [BR:
phyg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JTY93_06235
Antimicrobial resistance genes [BR:
phyg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JTY93_06235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QSB40980
LinkDB
All DBs
Position
complement(1427134..1430301)
Genome browser
AA seq
1055 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPAIAPTAIDIQVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVASDSNSDGSMTITATFNQGTNPDIAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKSVKNFLMVIGLVSEDGTMTKDDLSNYIVSNIQDPISRTSGVGDFQVFGS
QYAMRIWLDPAKLNNYKMTPVDVSTAVQAQNVQVATGQLGGLPALPGTQLNATIIGKTRL
QTAEQFEKILLRVNSDGSQVRLGDVARVELGGQNYSISAQFNGKPASGMAIKLASGANAL
DTAKAIRATVASLEPFFPPGMKAVVPYDTTPVVTESISGVVDTLVEAIILVFLVMYLFLQ
NFRATIITTMTVPVVLLGTFGILAAFGFTINTLTMFGMILAIGLLVDDAIVVVENVERVM
AEEHLSPKEATVKSMSQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMAL
SVLVALIFTPALCATMLKPIDPEKHGQPKRGFFGWFNRTFDRGVLSYERGVGNMIKHKAP
SFLVYLIIFAGMIWLFTRIPSAFLPEEDQGVIFAQVQTPVGSSAERTQTVIDDMRAFLLN
NKEGEPGEGKAVQSVFTVNGFNFAGRGQSSGLAFVMLKPWSERDASMSVFEVAKRAQGYF
SQTFKDAMVFAIVPPSVLELGNATGFDVFLQDQGGVGHDALMNARNQFLGMAAQSKILAG
VRPNGVNDEPQYELTIDDEKASAQGISLSSINQTLAIALGGSYINDFIDRGRVKKVYIQG
DAAGRMSPEDLNKWYVRANDGKMVPLSAIASGNWIFGSPKLSRYNGVAAMEVLGTPAPGY
STGDAMAEVERIAKQLPAGVGYAWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESW
SIPIAVVLVVPLGVIGALMATSLRGLSNDVFFQVGLLVTVGLASKNAILIVEFAKELHEQ
GKGIVEAAIEASRMRLRPIIMTSMAFVLGVLPLAISSGAGSGSQHAIGTGVIGGMITATV
LAIFWVPLFFVTVSAIGSRKKTDKSDTPQTPKEAG
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaattttttatcgaccgtcccatttttgcctgggtaatcgccctggtaatcatg
ctggtcggggcactgtcgatcctgaagttgcccatcaaccaatacccggccatcgcacca
accgccattgatatccaggtgacctacccaggcgcatccgcacaaaccgtgcaggacacc
gtggtgcaggtgatcgagcagcagctcaatggtatcgacaacctgcgttatgtggcctcg
gacagtaactccgacggcagcatgaccatcaccgcgacgttcaaccagggtaccaacccc
gacatcgcccaggtccaggtgcagaacaagctgaacctggcgaccccattgctgcctcaa
gaagtgcagcagcaggggatccgcgtaaccaagtcggtgaagaacttcctgatggtgatc
ggtttggtgtccgaagacggcaccatgaccaaggatgacctgtccaactacatcgtttcc
aacatccaggacccgatttctcggacctctggcgtcggtgacttccaggtcttcggttcc
cagtacgccatgcgtatctggctggacccggccaagttgaacaactacaagatgacccca
gtggatgtcagcaccgccgtgcaggcacaaaacgtacaggtggccaccggccaactgggc
ggcctgccagccctgcccggcacgcagttgaacgccaccatcatcggcaagacccgcctg
caaactgccgagcagtttgaaaagatcctcctgcgcgtgaacagcgacggttcccaagtg
cgcctgggtgatgtcgcccgtgtcgagctgggtggccagaactacagcatcagcgcccag
ttcaacggcaagccggcttccggcatggcgatcaaactggcatcgggcgccaatgccctg
gacaccgccaaggccatccgcgccacggtggcgtctctggagccgttcttcccgccgggc
atgaaagccgtggttccgtatgacaccacccccgtggtgaccgaatcgatttccggggta
gtcgataccctggtcgaggcgatcatcctggtgttcctggtgatgtacctgttcttgcag
aactttcgcgccaccatcatcaccaccatgacagtaccggtggtcttgctgggtacgttc
ggcatcctcgcggccttcggtttcaccatcaacaccttgaccatgttcggcatgatcctg
gccatcggcttgctggtggacgatgcgatcgtggtggtagaaaacgtcgagcgggtgatg
gccgaggaacacctgtcgcccaaggaggcgacggtcaagtccatgagccagatccagggc
gccctggtgggtattgccctggtactgtcggcggtactgctgccgatggcgttctttggc
ggctccacgggtgtgatctataaacagttctccatcaccattgtgtcggcgatggccctg
tcggtactggttgcactgatcttcaccccggccttgtgcgccaccatgctcaagccgatc
gaccctgagaaacacgggcaacccaagcgtggattcttcggctggttcaaccgcaccttc
gaccgtggcgttctgagctacgagcgtggcgtgggcaacatgatcaagcacaaggcgcct
tcgttcctggtgtacctgatcatcttcgccggcatgatctggctgttcacccgtattccg
agcgcgttcctgcccgaggaagaccagggtgtgatcttcgcccaggtgcagacgccggtg
ggttcttcggccgagcgcacccagaccgttatcgacgacatgcgtgccttcctgttgaac
aacaaggaaggtgagcccggtgaaggcaaggccgtgcaatcggtatttaccgtaaacggc
ttcaactttgccggtcgtggccaaagctcgggcctggcattcgtcatgctcaagccatgg
agcgagcgggatgcctcgatgtcggtattcgaggtggccaagcgggcccagggatacttc
tcccagaccttcaaggacgccatggtgtttgccatcgtgccaccttcggtactggagctg
ggtaacgcaacgggcttcgacgtgttcctgcaggatcagggcggtgtgggtcacgatgca
ttgatgaacgcacgtaaccagttcctcggcatggcggcccaaagcaagatccttgctggc
gtacgtccaaacggtgtgaacgatgagccgcagtatgagttgaccatcgacgacgagaag
gccagcgcccagggcatcagcctgtcgagcatcaaccagaccctggcgattgccctgggt
ggcagctacatcaacgacttcatcgaccgtggtcgggtgaagaaggtctatatccagggc
gatgccgctggccggatgtccccggaagacctgaacaaatggtacgtgcgcgccaacgac
ggaaaaatggtgccgttatccgccattgcctccggcaactggatcttcggttcgccgaaa
ctgtcgcggtacaacggcgtagcggccatggaagtcctcggcactccggcgccgggctac
agcaccggtgacgcgatggcagaagtcgagcgtatcgccaagcaactgcctgcgggtgtg
ggctatgcctggaccggtctgtcctatgaagaacgcttgtccggctcccaggcacctgcg
ctgtacgccctgtcgttgctggtagtgttcctctgcctggcggcgctgtacgaaagctgg
tcgatcccgattgcggtggtgttggtagtaccgctgggtgtgatcggtgcactgatggcg
accagcctgcgaggactgtccaacgacgtgttcttccaggtggggttgttggtgacggtg
ggcctggcctcgaagaacgccatcctgatcgtggagttcgccaaggagctgcatgagcag
ggcaagggcatcgtcgaggcggccatcgaggcgtcccgcatgcgtctgcgtccgatcatc
atgacgtccatggcgttcgtcctcggcgtactgccgctggcgatctcctcgggcgcaggt
tcaggcagccaacacgcaatcggtaccggggtaattggcggtatgatcaccgctaccgtc
ctggcgatcttctgggtgccactgttcttcgtgaccgtgtctgccattggcagccggaaa
aaaactgacaagtccgatacaccgcaaactcctaaagaggctggctaa
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