Pangasianodon hypophthalmus (striped catfish): 113525358
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Entry
113525358 CDS
T05759
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A-like
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113525358
04020 Calcium signaling pathway
113525358
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113525358
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113525358
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
113525358
NCBI-ProteinID:
XP_026767651
LinkDB
All DBs
Position
Unknown
AA seq
1937 aa
AA seq
DB search
MARFGEPGVPGGGSVARGGSRQGTQRVYKQSMAQRARTMALYNPIPVRQNCLTVNRSLFL
FSEDNVVRRSDCVNESEMMIVMMVFSLTVVFTPFEWMILATIIANCIVLALEQHLPDDDK
TPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKDSYLRNGWNVMDFVVVLTGILSTVG
SEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGVLLFVAILMFAIIGLE
FYSGKFHKACYDNVTGELLDDQLCGDELPARVCPPGSVCNDTWLGPNYGITQFDNILFAV
LTVFQCITMEGWTDMLYYSNDALGSTWNWMYYVPLIIIGSFFMLNLVLGVLSGEFAKERE
RVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDTTGDRSRRRPTIKKSKTDLL
NPEGGQDHMGDAVGLKAEGSSFSKKERRFRILVRKMVKTQAFYWTVLSLVGLNTLCVAVV
HYDQPELLSDFLFYAEFIFLGLFMMEMLIKMYGLGTRPYFHSSFNCFDCAVIVGSIFEVI
WAVIKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVV
FALLGMQLFGGQFNFDQGTPPTNFDTFPAAIMTVFQILTGEDWNVVMYDGIQSQGGVHKG
MISSVFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEATTQKIALQKAKEVA
EVSPLSAANLSIAAKEQQKNSKPPKSVWEQRTSEIRRQNLMTSREVLYNELDSEDHWKVR
ERVMGMMGMMKKRMTWTGRNVRMGHKSDTQRCGRCSVCMCVCMCVCVCVCVCVIHPPFCR
GSSKGKDISIIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIF
AVVAVQLFKGRFFCCTDESKEFERDCRGEYLVYERENEVKAQKREWKKYDFHYDNVLWAL
LTLFTVSTGEGWPEVLKHSVDSTFENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALI
IITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPENKLSFQYRMWQFVVSPPFEY
SIMSLIALNTIVLMMKYHEASEMYDKVLKNLNIVFTILFFMECILKMIAFGVRNYFRDAW
NIFDFVSILGSITDILVTELWNPNNIINVRFLRLFRAARLIKLLRQGETIRILLWTFVQS
FKALPYVCLLIAILFFIYAIIGMQLFGNLALDEEGESAINEHNNFRTFFMALMLLFRSAT
GEAWHEIMLSCLGGMPCDPASGNQTDECGSNFAYAYFVSFIFLCSFLMLNLFVAVIMDNF
EYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVA
CKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMIAIWPNL
SQKQLDLLVTPHKSATDLTVGKIYAAMMIMEYYRQSKAKKLQALREEQNRTPLMFQRMEP
NTSQDKGHEINEVNGGHGVKEAPQENHDNLPVESWVTPRSQIFQKSADENWSTDSPYHQQ
ENRHNTQTVEMRTMPVHSDTDTSLPLEGRTVSMPRLPLHHQQRRNKLRGSNLSTISDVSP
LRRSTSSLVHGRSGRGLRLDDYSLERVESEEGPRHGRRRRERERERERNHRTSERSLTRY
TDADTGLGTDLSTTTQSGELPPKERERERGRAKDRRHHHHHHHHHHHHHHSSVEKERYER
EREYHHHPHNRHDTRLSRSPSEGRDGRARRQGSSSVSVSPVPSTSGTSTPRRTRRQLPPT
PPTPRPHVTYSPAPRKPLPPPTPRREPPPIGPPSRRPSPRRAPFYDRRFEYEPPNYEQSV
TQGHSHTPRHGSTHHSPSHRSPASHHRRVPNGYRSSSSPSPHRRGPTHHGMQRAPQPRPP
RKSLHEPYSETDEDDWC
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggttcggagagcccggtgtgcccggtgggggctcggtggcccggggcggaagc
aggcagggaactcagcgcgtgtacaagcagtcaatggcgcagagagcgcgcaccatggcg
ctgtataaccccatccccgtgcgccagaactgtctcaccgtcaaccgctctctcttcctg
ttcagcgaggacaacgtggtccgaagaagtgattgtgtcaatgagagtgagatgatgatt
gtgatgatggtgttttccttaactgtagtgttcactccatttgagtggatgattttagct
accatcattgctaactgcattgttttagcacttgagcagcatttacctgatgatgacaaa
acaccactctcagaacgactggatgacactgagccgtacttcatagcaattttctgtttt
gagtctggcattaagattctggctctgggttttgccttccataaagactcataccttcgc
aatggctggaatgtcatggacttcgttgtggtgctgactggtattttatccactgttggt
tctgagtttgatttgcggacgctgcgtgcggtcagagtgctgcgacctctcaagcttgtc
tcaggaattccaagcctgcaggtggtgctgaagtccataatgaaggcaatgatccctctg
ctgcagattggagttttgctgtttgttgcaatcctcatgttcgccatcatcggccttgag
ttttactctggaaaattccacaaagcctgttatgacaatgtcacaggagagcttcttgac
gatcagctgtgtggtgatgagttaccggcacgtgtgtgtcctcctggatccgtgtgtaat
gacacgtggctcggaccgaattacggaatcacgcagtttgacaacattctgttcgctgtg
ctcaccgtgttccagtgcatcactatggagggctggacagatatgctttattatagtaac
gatgctttaggaagcacttggaactggatgtactacgtcccgctcattatcattggctct
ttctttatgctcaacttggtgttgggtgtgctgtctggtgagtttgctaaagagagggaa
cgagttgagaaccgcagtgagtttctgaagttgcggagacagcagcagatcgagagagaa
ctgaatggatatctagagtggatctgcaaagcagaggaagtgattctggctgaagatgac
actacaggagaccgctctcgccgcagacccactataaaaaagagtaaaactgacctgctg
aacccggagggaggacaggatcacatgggggatgcagtgggtctgaaagctgagggctcc
agttttagcaagaaagagcgccgtttccgtatccttgtacgtaagatggtaaaaactcag
gcgttttattggactgtcctcagcctcgttggtctgaacacactctgtgtcgccgttgtc
cactacgaccagcccgaactgctctctgactttctgttttatgcagagtttatctttctg
ggcctcttcatgatggagatgctgataaagatgtacggattggggacgaggccgtacttc
cactcctccttcaactgttttgactgtgctgtgatcgtcggcagtatatttgaggtgatc
tgggcagtgataaaacctggcacttcatttgggatcagtgtactgcgagcactgagactg
ctccggatcttcaaagttacaaagtactgggcttctctgcgtaatctggtagtgtctctg
ttgaattcaatgaagtccatcatcagccttcttttcctcctcttcctcttcatcgtggtg
tttgcccttctggggatgcagctgtttgggggacagtttaactttgaccagggaactcct
cctacaaactttgacacctttcctgcagccatcatgactgtgtttcagatcctgacaggt
gaggactggaacgtggtgatgtatgatgggatccaatctcaggggggtgttcacaaggga
atgatctcctctgtgttcttcatcgtactcacgcttttcggtaactacacgctgctgaat
gtgttcttggccatcgctgtggataatctggctaatgctcaggaactcaccaaggatgag
caggaagaagaagaagccaccacacagaaaatcgctctccagaaagctaaagaggttgct
gaggtcagcccactctctgctgcgaacctctctatcgctgctaaggaacagcagaagaac
tcaaagccccctaagtcagtgtgggagcagcgcaccagcgagattcgccgccagaacctg
atgaccagcagagaggtgctctacaatgaactggactctgaagaccactggaaggtcaga
gaaagggtgatggggatgatggggatgatgaagaagagaatgacatggacagggaggaac
gttaggatgggtcacaaatcagacacacaaagatgtggtagatgtagtgtatgtatgtgt
gtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatacatcctccattctgtagg
ggaagcagtaaaggcaaagacatcagcatcatcaaatccctgagagtgttacgagtcctg
cgaccactcaagaccatcaaacgtcttcctaaactgaaggctgtgtttgattgtgtggtg
aattctctgaagaacgttttgaacatcctcatcgtctacatgctgttcatgttcatcttt
gctgttgtggctgtgcagctttttaaagggcgatttttctgctgcacagatgagtccaaa
gagtttgagcgtgactgccggggtgagtatctggtgtatgaacgtgagaatgaggtaaaa
gctcagaaacgcgagtggaagaagtacgactttcactatgacaacgtactgtgggctctg
ctcacactcttcactgtgtccacgggagagggctggccagaggtgctgaagcactctgtg
gactccacctttgagaatcagggccccagtccaggttataggatggagatgtccatattc
tacgttgtctactttgttgtgtttccattctttttcgtgaacatcttcgtcgctctcatc
ataataaccttccaggagcagggggacaagatgatggaggactacagcctggagaagaat
gagagagcatgtattgactttgcgattaacgcgaagccgctaacacgtcacatgccagag
aacaagctgagcttccagtaccgaatgtggcagtttgtggtgtcacctccatttgagtac
agtatcatgagcctgattgccctcaacaccatcgttctaatgatgaagtatcatgaagct
tcagaaatgtatgataaagtgctgaaaaacctgaacatcgttttcaccatcctcttcttc
atggagtgcatcctgaaaatgatcgccttcggagttcgcaattatttccgagatgcttgg
aacattttcgacttcgtgtccatcttaggcagcatcacagacatcttagtgacggagctg
tggaatccgaacaacatcatcaatgtgaggttccttcgtctgtttcgtgctgctcgtctc
attaagttgttgcgacagggcgagacaattcgaattctcctttggacctttgtccagtcc
ttcaaggctctgccgtatgtctgcctgcttattgccatcctcttcttcatttatgccatc
attggcatgcagctctttggtaatttagcattagatgaagaaggagaaagtgccataaat
gaacacaacaacttcagaactttcttcatggcactgatgctgttgttcaggagtgctaca
ggcgaggcatggcatgagattatgttgtcatgtttgggtgggatgccatgtgaccctgct
tctggaaaccagacggacgagtgtggcagcaacttcgcctacgcttacttcgtctctttc
atcttcctctgttcattcctgatgctgaatctgtttgtagcagtaatcatggataatttt
gagtatttaacccgcgactcatcaattcttggccctcaccatctggatgaatacgtcaga
atctgggcagagtatgacccagcggcatgtggacgtattcattataaggatatgtacagt
ttattgcgagttatcgaccccccactcggattaggaaagaaatgtcctcatagggtcgcc
tgcaagagactgttgcgtatggatttgcccgttgctgatgacaacacggtacatttcaac
tccacactgatggcattaattcgtactgcacttgatatcaagatcgctaaaggtggagct
gataaacaccagatggatgcggagctacgaaaggagatgatagcaatttggccgaatctg
tcccagaagcagctggacctgctggtcacaccacacaagtcagctacagacctgacagtg
gggaagatctatgctgccatgatgattatggagtattacagacagagtaaagccaagaaa
ctgcaggcgctccgagaagaacagaaccgaacaccattaatgtttcagcgcatggagccg
aacactagtcaggacaaaggtcacgagatcaacgaggtcaatggaggtcatggggtcaag
gaggccccacaggaaaaccatgacaatcttcctgttgaatcctgggtaactcctcgttct
cagatcttccagaaatctgctgatgagaactggagcacagactcaccataccatcagcag
gaaaaccgacacaacacacagacagtagaaatgagaacgatgcctgttcactccgacact
gacacatcactaccactggaagggaggactgtctccatgccccgcctcccactacatcac
caacaacggagaaacaaacttcgaggaagtaacctcagtaccatttctgatgtgagtcca
ttgaggcgttctacatcctctttggttcacgggcgttcaggtcgaggcctgcgattggat
gattactctctggagagggtggagtcagaggaggggcctagacatgggagaaggaggaga
gagagagaaagagagagggaaagaaatcaccgcacctccgagagatcactgactcgctac
acagatgctgatacagggctgggtactgatctcagtaccaccacacagtcaggtgaactt
cctcctaaagagcgagagcgagaaagaggaagagccaaagaccggcgacatcatcaccac
caccatcatcatcatcatcatcaccaccatagctcagtggagaaagagcggtatgagaga
gagcgagagtaccatcatcatcctcacaacagacacgacacacgcttgtcacgttcaccc
agtgaaggcagagacggcagggcacgcagacagggaagcagttctgtgagtgttagtcca
gttccctcaacgtcaggaaccagtacaccgcgccgcactcgacgtcagctccccccgact
ccacccacaccgcgcccgcatgttacatattcacctgcccccaggaaaccactcccacca
cccactcctcgccgtgagcctccacccatcggcccgccttctcgccgaccctccccccgc
cgtgcaccattctatgaccgccgttttgaatacgagcctccgaactatgagcagagtgtg
acgcaaggacactcccatacgccccgtcacggctccacccaccacagtccttcccaccgc
agtcctgcctctcatcacagacgtgtacccaacggctaccgctcctcctcctctccatct
ccacaccgccgaggccccacccaccatggcatgcagcgtgccccacagccccgcccaccc
cggaagagtctccatgagccgtacagtgagacagatgaggatgactggtgctaa
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