Pangasianodon hypophthalmus (striped catfish): 113526713
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Entry
113526713 CDS
T05759
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113526713
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113526713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
113526713
NCBI-ProteinID:
XP_026769809
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MLSSPAVILQPYGLPVYPQTSCYPSLVQGAPAQEAGPGSSDPALPQVYAAPPSYPPPGQA
PPTPAPRLPPLDFSSAHSSSDYPDHHQLRVYQSAQHEGAEPIPANNTDEGLAPVTSDPQS
LNVPVATGGGAGSGSEEEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFENASEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNAAGWK
INPVMGAMYAPELYTVASFPYPVPTATLAYRGSALRGRGRAVYNTIRSAAAAATPTAVPA
YPGVVYQDGLYGTEVYGGYPAAYRVAQSPSATATAAYSDGYGRVYATDPYHHSVGPTTTY
GVGTMVIHTHTSSVTFNDSMRVCIEEATIASPHTDLRTDPR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcctctcctgcggtcatcctgcagccgtacggtctccccgtgtacccacaaacc
tcctgctaccccagcctagtgcagggtgctcctgctcaggaggcggggccaggcagcagt
gaccccgcccttccgcaggtctacgccgcacccccttcgtatccaccacctggacaagcc
ccgcccacacctgcacccagactcccacctcttgactttagctccgcccactccagctct
gattacccagaccaccatcagctcagagtgtatcagagcgctcagcatgagggggcggag
cctatacctgccaataacacggatgaaggtctggcccccgtgacctccgacccccagtcc
ctgaacgtccccgtggcgacagggggcggagcaggaagcggcagcgaggaggaggggtct
gggaaagcccaacccaaacgccttcatgtctccaatattcccttcaggttccgtgatcct
gacctgagacagatgttcgggcaatttggcaaaatcctggacgtagagatcatcttcaat
gagagagggtcaaagggttttggctttgtgacgtttgagaacgcgtcagaagccgatcga
gcgcgagagaagctcaacgggacgatcgtggaggggagaaagatcgaggtgaacaacgcc
acggccagagtggtgacgaagaagccgcagactccgctcgttaacgctgcaggatggaag
attaaccccgtgatgggagcgatgtacgctccggagctctacaccgtggccagctttcct
tatcccgttcccacggcaacgctggcttacagaggctccgccctgagggggcgtggccgt
gccgtgtataatacaatccgctcagcggctgcagcggccacgcccactgctgttcccgcc
tatccaggggtggtctatcaggatggattatatggaactgaagtctatggaggataccct
gctgcatacagagtggctcaatctccttcagccacagctacagcagcgtacagtgatggg
tacgggagagtgtatgccactgacccctatcatcactctgtaggtccgaccaccacatac
ggagtcggcactatggtgattcacacacacacttcttcagtgaccttcaatgattcaatg
cgagtctgtatcgaggaggctacaatcgcttcaccccatactgacctccgtactgacccc
cggtga
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