Pangasianodon hypophthalmus (striped catfish): 113527208
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Entry
113527208 CDS
T05759
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113527208
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113527208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
113527208
NCBI-ProteinID:
XP_026770581
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
METPSWAGQCWETKPGNGLCKTGNIALFGNVVYSGLLNDHFWHFGVPLVTRLGNQEAPAP
PEAMAQPYAPAQYPPPPPQNGLPGEYAHPGQEYTGPNPVPEHAAALTIYTTTQTHSDPTG
TENSTSSLTAPSNVPQADEVAQTEGSQQLQLQPSDSSEKQQPKRLHVSNIPFRFRDPDLR
QMFGQFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATAR
VMTNKKVANPYTNGWKLNPVVGAVYGPEFYAVTGFPYPTTGATVAYRGAHLRGRGRAVYN
TFRAAPPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPAAAAAAAYSDSYGRVYATAD
PYHHTIGPAATYSVGTMASLYRGGYSRFTPY
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagaccccgagctgggcaggtcagtgttgggaaactaaaccaggaaacgggctgtgt
aaaaccggaaacattgctctctttggaaacgtagtgtacagtgggctgctgaacgatcac
ttctggcatttcggggttcccctcgtcacaagactgggtaaccaggaggcacctgcccct
ccagaggccatggctcagccgtatgccccggcgcaatacccccctccccctcctcagaac
gggctgcccggcgagtatgcccaccccgggcaggagtacacagggccaaacccggtgccc
gagcatgcagctgccctcaccatctatacaaccacacagacacacagtgatccaaccggt
actgagaacagcacgtcctcactcacagcgcccagcaacgtaccacaggcagatgaggtg
gcgcagacagagggctcccagcagctccagctccagccctcagactcttcggagaagcag
cagcccaagcggttacacgtctccaacattccattccgcttccgtgatccggacctccgg
caaatgttcgggcaatttgggaaaattttagatgtggaaattatttttaacgagcggggc
tctaagggctttggttttgtaacttttgaaacaagtgcagatgcagaccgtgcaagggag
aaactaaatggtacaatcgtagagggacgcaaaattgaggtaaataatgcaacagcaaga
gtaatgacaaacaaaaaagtggctaacccctacacaaacggctggaagctgaacccagtg
gtgggagctgtctatggtcctgaattttatgcagtcacaggcttcccatacccaactaca
ggggcaacagtggcatatagaggtgcccacttgaggggccggggtcgtgcagtttacaac
acgttccgtgccgcacctccacctcctcccattcctgcttatggagccgtggtttaccaa
gatggcttctatggtgccgagatctatggtggctatgcggcatacaggtatgcccaacca
gccgcagcagctgcagcagcttacagtgacagctatggcagagtctatgcaacagcagac
ccttatcaccacacgattggacctgcagccacatacagtgtgggcactatggctagccta
tacagaggagggtacagtcgcttcactccatactaa
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