Pangasianodon hypophthalmus (striped catfish): 113528881
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Entry
113528881 CDS
T05759
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113528881
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113528881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
zf-RING_10
PRP1_N
zf-Nse
Zn_ribbon_SprT
Fib_alpha
Exonuc_VII_L
Neprosin_AP
Motif
Other DBs
NCBI-GeneID:
113528881
NCBI-ProteinID:
XP_026773489
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MAEASISVDQDQFSCPVCLDLLKDPVTIPCGHSFCKVCINDCWDQEDKSGVYSCPQCRDT
FTPRPVLRRNNMLAEVVEKLKKKTEVQAASPAHCYAGSGDVECDFCKGRKYKAVKSCLMC
LASFCETHLKPHYEVPALKKHTLIEASGNLQEKICSEHDKVLEIYCSTDQSFICLWCTMD
KHKDHETVPVASKRTEKQSELKEEQMKSQQRIQEKKKKVQELKQAVNTIKLSAQTAVEDS
ERIFTELISSMEKKRSEVTELIRAQEKTELSRAERLLEQLEQEIADLQRRVTELEQLSHT
HDHIHFLQSFQSLCVSSGREDSPSITVNQHLSFDGVRKSLSDLKKRLEEFCQEEFIKIPK
HDERNCPAGKSLLSLQHAAAVQMILPSEPKSREDFLHYFCDLTLDPNTVNYNLILSEKNR
VVTYSEIKQPYSDHPERFDSRWQVLCKESVCGCCYWEVEWSSKGYVFISVSYKDISRKGG
YESVFGGNSQSWSLQCSSSSHSIWHNNIQTALRVITSSRIGVYVDHSAGTLSFYSVSDTM
KLLHRVHTTFTQPLYAGFWLDLRSTVRLCDLK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccagtatttctgtagatcaggatcagttcagctgtccagtctgtctggat
ctactgaaggatccagtgactatcccctgtggtcacagtttctgtaaggtgtgtattaat
gactgttgggatcaggaagataagagcggagtttatagctgtcctcagtgcagagacact
ttcactccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactg
aagaagaagactgaagtccaagctgcttctcctgctcactgttacgctggatctggagat
gtggagtgtgatttctgcaaaggtagaaaatacaaagctgtcaagtcctgtctgatgtgt
ctggcctccttttgtgaaactcatttgaaacctcactatgaagttcctgctttgaaaaaa
cacacattaatcgaagcttctggaaatctgcaagagaagatctgctctgagcatgataaa
gtgctggagatctactgttctactgatcaaagcttcatctgtctttggtgtacaatggat
aaacacaaagatcatgaaactgtccccgttgcatcaaaaagaactgaaaaacagagtgag
ctaaaggaggagcagatgaaatcccagcagagaatccaggagaagaagaagaaggtgcag
gagctgaaacaggctgtgaacactataaagctgagtgcacagacagcagtggaggacagt
gagaggatctttactgagctgatcagctccatggagaaaaagcgctcggaggtgacggag
ctgatcagagctcaggagaagactgaactgagtcgagctgaacgactcctggagcaactg
gagcaggagattgctgatcttcagaggagagtcactgagctggagcagctttcacacaca
cacgatcacatccatttcctccagagtttccagtctctctgtgtctcttctggacgtgag
gactcacccagcatcactgtcaatcaacatctctcatttgatggagtgaggaaatctctc
tctgatctgaaaaagagactggaggaattctgccaggaggaattcatcaaaatccctaaa
catgatgagagaaattgtcctgctgggaaatctttactttctctgcagcacgctgcagca
gttcagatgattttaccctcagaaccaaagagcagagaagattttctacactatttctgt
gatctgactctggatcccaacacagtaaattataatctcattctgtctgagaagaacaga
gtggtgacatacagtgagatcaagcagccgtactctgatcatccagagagatttgactct
cggtggcaggtgttgtgtaaggagagtgtgtgtggatgctgttactgggaggtggagtgg
agcagtaagggttatgtgttcatatcagtctcatataaagacatcagcagaaaaggaggt
tatgagagtgtgtttggaggcaacagtcagtcctggagccttcagtgttcttcttcttct
cactctatctggcacaacaacattcagactgcactcagagttataacatcctccagaata
ggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgacacgatg
aagctcctccacagagtccacaccacattcactcagcctctatacgctggattctggctc
gatttgagatcaactgtgagattatgtgatctgaaataa
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