Pangasianodon hypophthalmus (striped catfish): 113529864
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Entry
113529864 CDS
T05759
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6-like isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113529864
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113529864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
113529864
NCBI-ProteinID:
XP_026775209
LinkDB
All DBs
Position
Unknown
AA seq
2948 aa
AA seq
DB search
MKIQKKDKQMSATHILMHTSATSATTASEQNAQTTFSIGHFGKEQIRIIDGPSNHCVAHA
KLSGMREVVQGSSSLSPNLSVSPVNSEEDDGGGGPRVRKKRKKKDKKDTREDRECDIRPK
KKKVQKEGKRLLLKKSKALKELKETKKVEGKVVKDPKKVKKVQEIKSKTQGKDVTSPPRQ
RGRKPKEQSVVPLEKRKKGKRKNDAPQEAAESDDTASLCTLATGGEESTDPMDNTKRRSG
RQVKRRKYNEDLDFKVVDDDGETIAVLGTERIPPISSSTLAWQAEEPPEDEANIIEKILS
VRTIKKETFPGEPVEESEEFYVKYRNFSYLHCKWATLEELEKDPRIHQKIKRFRNKHAQM
KHIFSELDEDLFNPDYVEVDRVLEIAITTDTETGEEVTHYLVKWCSLSYEESTWELQEDV
DPVKIREFEELKKIPELTPVERPSPEQWQKLEQSREYRNGNQLREYQLEGMNWLLFNWYN
RKNCILADEMGLGKTIQSITFLYEIFRMGLRGPFLIIAPLSTITNWEREFRTWTEINVIV
YHGSQISRQMILQYEMYHRDEQGNIMPGLFKFHGVITTFEMIMADCPELKKVNWRCVVID
EAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPVQFPSESTFLEE
FGDLKTEEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKN
FTFLAKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILDSFRKTHNPDAPDFQLQAM
IQAAGKLVLIDKLLPKLIAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLR
QAAIDRFCKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ
SKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKMEVEDLLRK
GAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVSSGNRTDISLD
DPNFWQKWAKIAELEIDSKEEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDTEER
PCRSRRLGDRNKRYLRAECFRVEKNLLIFGWGRWKDILNHGRFKWHLTERDMEVLCRALL
AYCVRHYKGDDKIKSFIWDLITPTKDGHNQALHNHSGLSVPVPRGRKGKKLKNQLSPPEL
KNADWLVHCNPEVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAANQALEGVSAS
KLEVALPEVDYMEIPTGWWDAEADKSLLIGVHKHGYERYNAMRADPQLCFLERVGMPDVI
ALTAEQGGAEAAPDVTDSVIKSNDIKEEVDGKPEGIEDKEEKKQANSFSEDTVKHDSSLG
VTRPDGLAEEVVEQGQALWPTASALTARLRRLITAYQRYTRREPFRHEILMHEGIGPVAW
QLGEELRRCTTNSDPLFLEWQRRWTRREQADFYRTVSSFGVVYDPEKKVFDWRQFRIFAR
LERKTDESLERYFWSFVSMCRTACRLPPRKDEGLVDPTLCIEPITEERAARTLYRIELMR
KVREQVLNHPLLEERLKLCRPSLYLPVWWECGKHDRDLLTGVAKHGLSRTDFYILNDPHL
SFLETYRNYIPKENHGNPVSSLPHQHCYLGHCHSPQPTEYHHTLLHSSQIHQHMHAHGHH
QASEVVAASESESTLTMPANSRENFLDCPTINDSLDLGSLQHEGLTSGSLHSKTSKEPFN
GFPFNSASAGQSMLNSYDVQGDITGAQGDMTDSIDGKLRNDVLVGEQGSSEETGLMAPSV
ELDELQTPWGSSDHAETSDIFNEGDPILGEPSLETEFLDPPQSEDGQEREDPLTGCLSIP
SSDSQSDHVEPLAPSFMLFKDLNAGETSMEQPDLSASPPEYVAPQPLALSDVGIDQAGSI
SEELETKLGDSDITHCNPSSEDRAEHVEYHFKKEETSHGGHSNLETDQRLKEIESKTNNV
PSVETLMENHLEPLKVVCNMPSEEQLKDHCQVYLEESCEKLLMEPDKVPLTEPYDIPCKG
TLEELLEGSPNDPSEKLLVKEASGKPLENSLELVENSPANPTLSPHTLPSSFPLFPTFPT
PVPDHSVFPDPEADHDIKQELLLGSIESEVKPKPDSTTMTPHLEQAADVEVKDEMKEEET
KTTALLGDSFVEAPQFDPSICEVAGSLHDPKEPTIARLLQEKPHYTFSEWPKDKVIINRI
DSICQAILKGKWPSPSQQYESPNSVVNTCLSNSAQQRAGFLPARIPLPQDLNLNIPHSIP
HIHKERLVTPAFLSELKRSKCGFNTEVPVKPIDLGEKIQRGISHHGGALLLNGWQEAAMD
LSKATEIAFGREAESMRHVTHAVQSAPHKMPNLSSMEGLMGLDMAGILQAGLVHPVTGQI
VNGSLRRDDSIMRRRRGRRRNVETLDLGLVKEREINLSKAKGQPETINQPIVSSTSSQPD
CPTHPASVPPPSESLTMSVDREAASKGLMEWLRQNPSYRMELPAFSMSQTASMLHSFAER
PKQRRHRCKDPTKLDVNSLTGEERVPVVHRNTGRRLGGAMAPAIKELSQWLDANLEYFVA
PDWADVVKHSGFLPEGKFTRILTEPVNRDPSTRRRGRRPRSEMPKAPELPAGIGPLFMND
GLIGMDLVNLPNLRNVPGIPISGLMGFPPGLATALPGEDAKNGLSMLPMMLHSMSAVQPP
MYGTHLSGMINQSLSATASTVTTAASSSSTATVTSISSATVALSPSPAVSSSTAASKERA
SPEPSTERRSTDERTLGENEKKMLPAVPSPTVTSSSASITSSGSHLTFNPFLIPGMPHGL
LYPHMFLPHGSIMALPSASDSTGITKQKKKKIRDEGRVEDNGLLEVQDGEMKGMRDIETL
ESKHKEGRLEESLPAVDTSKVTSNDASDPPSVVNTAKAVEEIKGEAEKTIECSMPVPKED
GLDVTQDV
NT seq
8847 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacaaaagaaggacaagcagatgtctgccacgcacattttaatgcacacttca
gctacttcagccaccactgcctctgagcagaatgcacaaaccactttttccataggccac
tttggcaaggagcagatccgaatcattgatgggccatctaaccactgcgtggctcatgca
aagctctccgggatgagggaagtagtccaagggtctagcagcctcagtcccaacctttct
gtttcaccagtcaatagcgaggaggatgatggaggaggtgggcccagggtgaggaaaaaa
cgaaaaaaaaaagacaagaaagacacaagagaggacagagagtgcgacattagaccaaag
aaaaagaaggtacagaaagaagggaagcggctgctcctgaagaaatcgaaagcactgaag
gagctaaaagagacaaagaaggtggaggggaaggtagtaaaggatcctaaaaaggtcaag
aaagttcaagagatcaagtcaaaaacacagggaaaggatgtgacctccccaccaaggcaa
cgtgggaggaagccgaaagagcagagtgttgtacccctggagaaaaggaaaaaagggaag
cggaaaaatgatgcaccgcaggaggcagccgagagtgatgatacggcctcactttgtaca
ctggctacaggaggagaagagagcactgaccctatggacaacactaagaggagatcaggg
cgtcaggtgaagcgcaggaagtacaatgaagatctagattttaaggttgtggatgatgat
ggtgagaccattgctgtgctgggaacagagcgaattcctcctatctcctcctctaccctt
gcttggcaagcagaggaaccccctgaagatgaagccaacatcattgaaaagattctctct
gtgcggacaattaagaaggagacattccctggagaaccagttgaagagtcagaggagttt
tatgtgaagtacagaaatttttcttaccttcactgtaaatgggcaacattggaggagctg
gaaaaggacccgcgcattcaccaaaaaatcaagcgcttcaggaacaaacatgcacaaatg
aagcacattttctcagagctcgatgaagacctctttaatccagactatgttgaagtagat
cgggttttggagattgcgatcactacagacacggaaactggagaggaggtgacacactac
ctggtaaagtggtgttctctgtcgtatgaggaaagcacttgggaactacaggaggatgta
gaccctgtgaagattcgtgagtttgaagagctcaagaaaataccagaactcacacctgtt
gagaggccttcaccagagcaatggcaaaagcttgaacagtctcgtgaatacagaaatggc
aaccaactcagagaataccagctagaaggcatgaattggcttcttttcaattggtacaat
aggaaaaattgtatcctagctgatgaaatgggcctcggaaaaaccatccagtccataaca
ttcctctatgagatcttccgtatgggtttgagaggtcccttcctaatcattgctcctctc
tccaccattacaaactgggagagggagttccgcacatggacggagattaatgtaattgtt
tatcatggtagccagatcagccgccagatgatcctgcagtacgagatgtatcacagagat
gaacagggaaacataatgcctggcctgtttaagtttcatggtgtaatcaccacatttgag
atgatcatggctgattgccctgaactgaaaaaggttaactggcgctgtgtggtgattgac
gaagcccatcgactgaagaatcgtaactgtaaactgctggaaggactcaaactcatgaac
ttggagcataaagtgctccttacaggtacacctctacagaactctgtggaggagctcttc
agtctgctcaacttcctggagccagtgcagtttccctcagagagcacattccttgaggag
ttcggagatctgaaaactgaggagcaggttaagaagcttcaagcaattttgaagcccatg
atgctgaggcggctaaaggatgatgtggagaagaatttggcccccaaagaagaaaccatc
attgaggtggaactcaccaatatccagaagaaatattaccgggccatcttggagaaaaac
tttacctttctggcaaagggagccaaccagcacaatatgcccaacctcatcaacactatg
atggagctacgcaaatgctgcaaccatccatatctcatcacaggtgctgaagaaaagatt
ctggatagctttaggaaaacccacaatcctgatgcaccagatttccagctccaggctatg
atccaggctgctgggaaattggtgcttattgacaagctgctgcccaaactcattgctgga
ggacataaagtgttggtgttctcccagatggttcggtgcctagacatactagaggactac
ctcattcagagaaggtacacatatgagcgtattgacgggagagtcagagggaatctgcga
caagcggctattgatagattttgtaaggtggactcggaccgcttcgtcttcctgctgtgc
acaagagccggggggctgggcatcaacctcaccgctgcagatacctgcatcatatttgac
tcggactggaacccacagaatgacctgcaggcccaagctcgctgtcatcggattggccaa
agcaaagctgtgaaggtttatcgtcttattacacgcaattcatatgagagggagatgttc
gacaaagccagtctaaagctgggattggacaaggctgttctacaggatattaaccgcaaa
ggcagtctaaatggggtacagcagctgtctaagatggaagtggaagatctcttgaggaaa
ggtgcatatggtgcccttatggacgaagaagacgaaggctctaagttctgcgaagaagat
attgatcagattctgcaacgccgtactcagaccatcaccattcagtctgaggggaaggga
tctacatttgctaaggctagctttgtttcctctggaaaccgaactgacatctctctggat
gacccgaacttctggcagaaatgggcaaaaattgctgagctggagattgactcaaaagaa
gagaaggagagtcttgtgattgatacaccacgtgtgcggaaacaaacacgacactacaac
tcatttgaggatgatgagctaatggagttctcagagctagacagtgacacagaggagcgt
ccctgtcgttcacgacgccttggtgaccgcaacaagcgatatcttcgagcagaatgcttc
agagtggagaagaacctgctcatattcgggtgggggcgttggaaggacatactgaatcac
ggacgttttaagtggcaccttacagaaagagacatggaagtgctgtgcagagcactgctt
gcctactgtgtccgtcactacaaaggtgacgacaagatcaagagcttcatctgggactta
atcacacccaccaaggatgggcacaatcaagcactccataaccactcaggactgtctgtt
cctgtaccccggggccgtaagggtaagaaacttaagaaccagttaagtcctcctgagcta
aaaaatgctgactggctagttcactgtaacccagaagtagtactccaggacgacagctac
aagaaacacctcaaacagcactgtaacaaggtgctgctgagggtgcgaatgctctattac
cttaaagcagaggtactcggggaggctgccaatcaggctctagaaggagtctcggccagc
aaactagaggtggccctgccggaagttgactacatggaaatccctactggttggtgggat
gctgaggcagataaatctctgcttattggggtacacaagcacgggtatgagcggtacaat
gccatgcgcgcagatcctcagctctgtttcttagagcgggtgggcatgccagatgtcatc
gcacttacggcagagcagggtggtgctgaggctgcgccagatgtaacagatagtgtaatc
aagagcaatgatataaaagaagaagtagacggtaagccagagggaatagaggacaaagaa
gagaaaaagcaggcaaactctttctcagaggacacagtgaaacatgacagttctcttgga
gtgactcgtccagatggattagctgaggaggtagtggagcaaggtcaggcactatggccg
acagcatctgctcttacagcaaggttacgacgacttatcactgcctatcagcgatacaca
cgccgtgaaccatttcgtcatgaaattctcatgcatgagggcattgggcctgttgcctgg
caactgggtgaggagctacgacgctgtacgacaaattctgatccacttttccttgagtgg
caaagaaggtggacacgccgtgaacaagctgatttctatcgtactgtgtcctcatttggt
gtggtgtatgacccagagaagaaggtttttgactggcgccagttccgtatctttgctcgt
ttggagagaaaaacagatgaaagtttggaaagatatttttggagctttgtgtctatgtgt
cgtactgcctgcagactgccaccaaggaaagatgaaggtctggttgaccccactctgtgt
atagaacccattactgaagaacgagctgctcgtacattgtaccgcattgagctcatgcga
aaggttcgtgagcaggtgttgaatcacccactcctagaggagcggctgaagctgtgtcgt
cctagtctttacttgcctgtttggtgggaatgtgggaaacatgaccgtgatcttctcact
ggtgtagccaagcatggccttagccgcactgacttctacatattgaatgatcctcatttg
tctttcctggagacctaccgtaactacatcccgaaagaaaaccatggaaacccagtgtca
agcttgccccatcaacactgctatctgggacactgccattctcctcagcccacagagtat
catcataccctcttacactcctcacaaatacaccagcacatgcatgcgcatggacatcac
caagcctcagaagtagtagcagcatcagaatcagaaagcactttgactatgcctgcaaac
tccagggaaaacttcttggactgccccacaattaatgactctttggatcttgggtctcta
cagcatgaaggcttgacctctggctccctccatagcaaaactagcaaagaaccgttcaat
ggatttccatttaattctgcctcagctggtcagagtatgttaaattcatatgatgtacaa
ggagacattactggggcacaaggagacatgactgactctatagatgggaaacttcgaaat
gacgttcttgtgggagaacaggggtcctcagaggagactgggttaatggccccttcagtg
gaactagatgaacttcagaccccgtggggaagctcagatcatgctgaaacctctgatatt
ttcaatgaaggtgatcctatcttgggggagccttcactggaaacagaattcctggaccct
cctcagtctgaagatggacaggaacgggaggatccacttacaggctgtttaagcatacca
agttctgactcacagagtgaccatgtagaaccactagcaccaagcttcatgttgttcaaa
gatctaaatgctggagagacttccatggaacagccagatttatctgccagtccacctgaa
tatgttgctccccaaccacttgcactttcagatgtaggcattgaccaagcagggtccatt
agtgaggagctagaaacaaagctgggtgattctgacatcacacattgtaaccctagttca
gaagatagagcagaacatgtagaatatcactttaagaaagaggaaacttcccatggtggc
catagtaatttggaaactgatcagaggctaaaggaaattgaaagcaaaacaaataatgtg
ccctctgtagaaactctgatggaaaatcacttggagcccctgaaggtagtgtgcaacatg
ccaagtgaggaacagctgaaggatcattgtcaagtgtacttggaagaatcttgtgaaaaa
ctcctaatggagccagataaagtgcccttaacagaaccttatgatataccatgcaaaggg
accctggaggaactacttgaaggatcccccaatgacccaagtgaaaaattgttggtaaaa
gaagcttctggaaaaccccttgaaaattctttagaactagtagagaatagtccagccaac
cccacactctccccccatactttgccttcttcatttccgttgtttcccacctttcccacc
ccagtaccagaccactctgtgttcccagaccctgaggctgaccatgacataaaacaggag
ttactcttgggttcaatagagtcagaggtcaaacccaaacctgacagcaccacaatgacc
ccacacctggaacaggctgctgatgtggaagtgaaggatgagatgaaggaagaagaaaca
aagacaacagctttattgggggatagttttgttgaggcaccacagtttgatccatccata
tgtgaggtggcaggcagtcttcatgatccaaaggagccaaccattgctcgactgctacaa
gagaaaccccattacacattctccgagtggcccaaggacaaagttatcatcaaccgcatt
gacagtatttgccaagccatcttaaaggggaagtggccttcccccagtcagcagtatgaa
tctcccaactcagttgtcaacacctgtctgtccaacagtgcccagcaaagggcagggttt
ttaccagcaagaatacctctacctcaagaccttaacttaaacattccacactcaataccc
catatacacaaggaacggttagtaacacctgcatttctttctgaactcaagcgttccaag
tgtgggtttaacacggaggttcctgtcaaaccaattgatcttggagaaaaaatccaacgt
ggcatctcccaccatgggggtgccctcctcctaaatggttggcaagaagctgcaatggat
ctgtctaaggcaacagaaattgcatttggtagggaggctgaatctatgagacatgtgacc
catgctgtccaatcagcacctcacaaaatgcctaacctaagctccatggagggcttgatg
ggattggacatggcgggtattctgcaagcaggacttgtacaccctgttacagggcagatt
gttaatggcagccttcgtcgtgacgattcaataatgaggaggaggagaggtcgaaggaga
aatgtggaaacacttgaccttggattggtgaaggaacgagaaataaatttaagtaaagca
aaggggcagccagagactatcaaccagcccattgtgtcctccacctcctctcagcctgac
tgccccacccatcccgcttctgtaccccctccctcagagtcactgaccatgagtgttgac
agagaggcagccagtaaaggcctgatggaatggctcagacagaacccaagctacagaatg
gagcttcctgctttttcaatgtctcagactgcaagcatgttgcacagttttgctgaacgt
ccgaagcagaggaggcaccgttgtaaagaccctacgaagttggatgttaattccctgact
ggtgaggagagagtcccagtagtgcaccggaacacaggtcgcaggctgggtggtgcaatg
gccccagccattaaggagctctctcaatggctagatgcaaacttagaatactttgtggct
cctgactgggcagatgtggtgaagcattcaggtttcctcccagaaggaaagttcacccgg
attctcacggagccagtgaatcgagatcctagcacacgtcgtagaggtagaagaccccgc
agtgagatgcccaaagctcctgagcttcctgctggcattggaccactctttatgaatgat
gggcttattggcatggacttggttaacttacccaacctccgcaatgtccctggcattccg
ataagtgggctcatgggctttccacctggtttggctacagccctaccaggagaagatgct
aagaatggcctaagtatgctacctatgatgctccatagtatgtcagcagtgcaaccaccc
atgtatggcactcatttaagtggaatgataaaccagtcactatcggctacagcctccaca
gtaaccacagctgccagctcctccagcacggcaacagtgacttccatatcctctgccact
gtggccttaagccctagccctgcagtcagctccagcacagcagcttctaaagagagagcc
agccctgaacctagtactgaaagacggagcacagatgagagaacgctaggagagaatgag
aaaaaaatgttacctgctgttcccagtcccactgttactagcagttctgctagcattaca
agcagtgggagccatttgaccttcaacccctttttgatcccaggaatgcctcatggatta
ctgtatccccatatgttcctgccacatggcagtattatggcacttccatcagcatcagat
agcactggcattactaagcagaagaaaaagaaaattagggatgaaggaagggtggaagac
aatggtttattggaggtacaggatggggagatgaagggtatgagggatatagagacactg
gagagtaagcataaagagggcaggctggaagaatctttgccagctgtggacaccagtaag
gttacaagtaatgatgctagtgatcccccatctgtggtcaacacagccaaagcagtagag
gaaataaaaggagaggcagagaaaacaatagagtgcagcatgcctgtgccaaaagaggat
ggcttggatgtaacacaggatgtgtag
DBGET
integrated database retrieval system
