Pangasianodon hypophthalmus (striped catfish): 113530880
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Entry
113530880 CDS
T05759
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113530880 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
113530880 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
PDZ
PDZ_6
PDZ_2
LRR_5
Motif
Other DBs
NCBI-GeneID:
113530880
NCBI-ProteinID:
XP_026777090
LinkDB
All DBs
Position
Unknown
AA seq
1555 aa
AA seq
DB search
MDNYSTIQLQCLEMTTKRKIIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGIQEF
PDNIKCCKCLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLSQLERLDLGSNEFTELPEVLEQIHNLKELWLDNNSLQTIPGSIG
KLRQLRYLDLAKNRIESLDADISGCESLEDLLLSSNMLQQLPDTIGMLKKLTTLKVDDNQ
LTSLPNTIGSPRAKLGLSLLEEFDCSCNELESLPPTIGYLHNLRTFAADENFLTELPREI
GNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPYTFTKLKDLAALWLSDN
QSKALIPLQTEAHPETKQRVLTNYMFPQQPRHDEDYQSDSDSFNPALWEEQRQQRMTVAF
DFEDKKEEEDNSAKVKVEINLKRYPTPYPEDLKNMVKSVQNMVGKTTHPLSTEKCSSGTN
MELHSTDAYEPKWPIAPKEVTEREVKEFSKPPLPEQGVILNSAIDIPKRKDKEDLNESSE
IALHRIVPKPQQPENTSLALTSSSCFCLIDSMGGSPNDIRISDMRPTLVEPPMYKPKVVL
LGKDKKESIDDSDPDKMHCLNNSGSSATYSDYSPSQGSSGSSNPPGNVSSMQSAAKEGPS
QTHWTNRLAQSFPKPIETKPLLSHRETPPSSTLQQRGERRPLSDTFDSWNDAPHYDNTGF
VAEETPVETPSSSSGNPMLGTKPRSASTAHGRRPLMRQDRIMGVPLELEQTPHSFRTTPD
AEVPPPPPPNPWQNWTRTPSPFEDRTAFPSKLEITPANSPNPDRKDFEQEMGELPGTFPS
SGAWGFLDSRDSGTGQGQPDVFAHVQGRNEQNKGNTMVISKSSERLSPMMKEVKSKFKKS
QSIDEIDIGSYKVYSIPLDNYSSSIENQGSVDRADLPGPLEQSMSRSQSAPMLDDDLDSF
GTNKSSQQQKPAIPKKVYQFDQSFNPQGAMDVMKAERRVPPPFPNTPEYVNQPGKTLPKE
LISPRGYRGYQPMEQMFSFSQPPVNDDAVPQQFPAQPQRSRPGFLRRADSLVSSTEMALF
RRVAEAQEHQMAEHYNRPQQIKAMMDAQNSLSTMADSQFHKRNGRYEEEYSSYQEPKKPI
MGYPTKSLTQRRPLSARSYSTETYGASQARPVSARPTMAALLEKLPSDYNISTCTEKSPD
TDMKMRPVPQKPEDMTSKMPVDWRQQLLRHIEAKRLDRSAVLKHNTVNFGMLYSGGYAAP
HASRSMTINFYNNTKHENQTTQWLPLPNTPSQQSNILDNGQEVVSPTTQWAPYSLGRRDV
PPDNTIIKKAVVHHSHQQQGIMGSGATAPHRGPQQYEGATNKVSIQQYQSPLAMAMTSTS
PRPQSARCFIQTKGQKSMDGFPEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDMGIFVT
RVQPDGPASNVLRPGDKILKANGHSFLHIEHQTAVSLLKSFPKAVDLVILRESTM
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggacaattactcgacgattcagttgcagtgtctggagatgactaccaagaggaagatc
atcgggcgcctggtgccatgccgatgcttccgcggggaggaggaggtcatctccgtgctg
gattactcacactgcagcctgcagcaggtgcccaaggagatcttcagcttcgagcgcact
ctggaggagctctacctagatgctaaccaaattgaagagcttcccaagcaactctttaac
tgtcaagccctgcgaaaattgagtattcctgataacgacctttcaaacctgccaaccacc
atcgctagccttgtaaacctgaaggaattagatataagtaaaaacggcattcaagaattt
cctgacaatatcaagtgctgtaaatgtttatcagttgtagaggccagtgtaaatcccata
accaaactcccagatggcttcactcagctcctcaatctgacacagctcttcttaaatgat
gccttcctcgagtacctacccgccaattttggaagattgtccaaattacgcatcctggaa
cttcgagagaatcacttgaaaacgatgccaaagtcaattcacaggctgtcacagctggag
cgattagacttgggaagcaatgaattcactgagctgccagaagttctggagcagattcat
aacctaaaagagctgtggctggacaacaattcattacagacaataccagggtctataggg
aaactgcggcagttgcgctatcttgacctggccaagaacaggatcgagagtcttgatgca
gacatctctgggtgtgagtctcttgaggacctcctgctctcgtctaacatgctgcagcag
ttgcctgatacgataggaatgttgaaaaagttaacaacattaaaagttgatgacaaccag
ctcacctcactgcctaacaccatcggaagtccacgcgccaaattaggtttatcgctctta
gaggagtttgactgtagctgtaatgaactggagtctttgcccccgactattggctacctg
cacaatctccggacctttgcggccgatgagaacttcctgacggagttgcccagagagatt
ggaaactgcaagaatgtcacggttatgtccttgcgctccaataagctggaatttctgcct
gatgaaatcggacagatgacgaagctgcgtgttctcaatctcagtgacaataggttgaag
aatcttccctacactttcactaaactgaaagatttggctgcactctggctatctgacaat
cagtccaaagcccttatccccctgcaaacagaggctcatcctgagaccaaacagagggtg
cttacaaactacatgtttccccagcaaccacggcacgatgaagattaccagtcagacagc
gacagcttcaaccccgctctctgggaggaacagaggcagcagaggatgactgtggcattt
gactttgaggacaagaaagaggaggaggacaactctgcaaaagtcaaggttgagattaat
ctgaaacgatatcccaccccctacccagaggacctgaagaacatggtgaagtcagtgcag
aacatggtggggaaaaccacccaccctcttagcacagagaaatgttcctcaggcaccaac
atggagctccatagcacagacgcatacgagcccaagtggcccattgcacccaaggaggtg
accgagagggaggttaaagaattctccaagcctcctctgccagagcaaggtgtcatcctg
aactcggcaatcgacatcccaaagcggaaggacaaggaggatctaaatgagagctctgag
attgctttacatcgcatcgttcccaagccgcaacagccagagaatacaagcctggccctt
acttcctcttcctgtttctgcctcatagattccatgggaggttcacctaatgatatccgg
atttctgacatgaggccgactctggtggaaccccctatgtacaagccaaaggttgtattg
ctgggaaaagataaaaaagaatccattgatgactcagacccagacaaaatgcactgcttg
aacaacagtggatcatcagccacctactcagactactccccctcgcagggctcttctggg
tcctccaaccctcctggcaatgtcagctccatgcagagtgctgccaaagagggtccatca
cagacccactggactaacagacttgctcagtctttcccaaagcccatagagacaaagcct
ctgctcagccacagagagacacccccctccagtaccctgcagcagcggggtgagagacgg
ccactcagtgacaccttcgacagctggaatgatgccccccactatgacaatacagggttt
gtagcagaggagacgccagttgagactcccagcagcagtagtggaaaccccatgctaggc
acaaagcctcgtagtgcctcaacagcacatgggcgacggcctctcatgagacaggatcgc
attatgggggtcccattagagctggagcagacaccacactctttccgtacaactcctgat
gctgaagtgcctcctccccctcccccaaacccctggcagaactggacgaggactcccagc
ccatttgaggaccgtacagctttcccttccaaactggaaattaccccagcaaacagcccc
aaccctgaccgcaaagactttgagcaggagatgggtgaactacctggcactttcccctct
tcaggagcctggggattcctggactccagagactcagggacagggcaaggtcagcctgat
gtctttgcacatgttcaaggacgtaatgaacaaaataagggcaacaccatggtcataagc
aagagctctgagagactttcgccaatgatgaaggaggtaaagtcgaaatttaagaagtcc
cagagcatagatgaaattgatattggatcatacaaggtgtacagtattcccttggacaac
tacagctctagcatagagaatcagggtagcgtggacagagctgacctcccaggacctctc
gaacagagcatgtccaggagccagtctgctcccatgctggatgatgatcttgacagcttt
ggcacgaataaatcttctcagcagcagaaacctgctatcccaaaaaaggtttatcagttt
gaccaaagttttaaccctcaaggggccatggatgtgatgaaagcagaacggagggtccct
ccaccatttcccaatacccctgaatatgtgaatcaaccaggcaagacactgccaaaggag
cttattagccctcgaggctaccggggctatcaaccaatggagcaaatgttctccttctct
cagccacctgtcaatgatgatgcagttcctcaacagtttcctgcccagcctcaacggtcc
cgtccaggtttcctgcggcgggcagattccctggtaagttctacagagatggcactgttc
cgcagggtagcagaagcccaggagcaccaaatggcagagcattacaacagaccccaacag
attaaagccatgatggatgcacagaatagcttgtctaccatggctgattcccagttccat
aagaggaatggtaggtatgaagaggaatactcatcttatcaagaacctaaaaagcctatt
atgggataccccacaaagagtctgacacagcgtcgcccactgtctgcacgaagctacagt
acagagacttatggggcatcgcaagctcggccagtgtctgcgcgccccaccatggctgcc
ctgctagagaaattgccttcagattataatattagtacatgcactgagaagagccctgac
actgacatgaagatgaggcctgttccacagaaaccagaggacatgacctccaaaatgcca
gtggactggagacaacagcttctaaggcacatagaggcaaaacggctagaccggagcgct
gtccttaagcacaacacagtaaacttcggcatgctgtactctggaggctatgctgcaccg
catgccagcagaagcatgacaataaacttttacaataacacaaagcatgaaaaccaaaca
actcagtggctacctctaccaaatactccatcacaacagagcaatattttagataatggt
caagaggtggtctctcccaccacacagtgggccccctactctttaggacgaagagatgta
cctcctgacaacaccatcatcaaaaaggccgtggtccatcattctcaccaacagcagggc
atcatgggaagtggagccacggcaccacaccgaggaccacagcagtatgagggagccacg
aataaggtgtccatccagcagtaccaatcacctctggccatggccatgacaagcaccagc
ccccgaccacagagcgcccgctgcttcatccagactaaaggccagaaaagcatggacggc
tttccagagcagttctgtgttcggattgagaaaaacccaggcctcggtttcagtatctca
gggggaatcagtgggcaggggaaccccttcaaaccctcagacatgggtatctttgttact
agggtacagcctgatggacccgcctccaatgttcttcgaccaggggacaaaattctgaag
gccaacggacatagttttttacacatcgaacaccaaacggcagtgtctcttctgaagagt
ttcccgaaagctgtggacttggtcattttaagggagagcacaatgtaa
DBGET
integrated database retrieval system
