Pangasianodon hypophthalmus (striped catfish): 113531366
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Entry
113531366 CDS
T05759
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113531366
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113531366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
DUF4303
zf-RING_10
ALS2CR8
DAHL
DUF2514
DUF4407
DUF5357
EzrA
DUF1664
Motif
Other DBs
NCBI-GeneID:
113531366
NCBI-ProteinID:
XP_026777868
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MCEVNMAEPMSPDYFSCHLCANLLRDPVAIPCGHSFCMDCISGYWNEADYTGIYICPQCR
ITFTQRPVLRPNATLSKVAEKIKKTGLNLNLVPPSNGSFAGPTDVPCDFCSGKKLKAVKS
CLNCLASYCEKHLKPHYESATFKRHKLVDELGNLDRKICPQHQKSLELFCRTDQMCICAI
CTVSEHKGHDIVSAEAERSEKQKLLGVSQAEIKQKCQQRTKELEELKTAVDSLKSSAQRA
MAESKKMFDEMITAIERMRSEVTKLININEKAAFSQAEGLMERLEQEIDELKKKETGLKQ
LYSTEDHIHFLQNFNYLCTPTDDGFIPKVSLNPDFSFSAARKAVAEIKERLEELGREELL
KVSKSVNEVPVYTLENRSVREKSSRVKDIQTVDSAPPSQPRSRSEFLKYFCQLRLDPSTA
YKELYLSEGNKKVTRTRNLQSYPDNPERFDTFAQVLCREALSGGRFYWEIEWNGEFSVGV
AYRGISRKGKGPLCLLGYNDKSWSLLCSDTGYSAWHNRVDKAISAPHSPRIGVYLDHSAG
VLAFYSIGETMTCLHRFETTFTEPLYPGFGVGTSVKICQLK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaggtgaacatggctgagcccatgtctccagattacttcagctgccacctatgc
gcaaatctcctgagggacccggtggccatcccctgtggccacagcttctgtatggactgc
attagtggctactggaatgaggctgactacaccgggatttacatctgtcctcagtgcaga
atcactttcacccagagacccgtgctcagacctaatgcaaccctctccaaagtggctgag
aagatcaagaagacgggcctgaacctcaacctggtgcctccaagcaatgggagctttgct
ggaccgactgacgtgccttgtgacttctgctcaggaaagaagctcaaagctgtcaagtcc
tgcctcaactgcttggcctcatactgtgaaaaacacctgaagccccactatgagtcggct
accttcaagagacacaaactggtggacgagcttgggaacctggacagaaagatctgccca
cagcaccagaagagcttggagctcttttgccgtaccgaccagatgtgtatctgcgctatc
tgcaccgtcagtgagcacaagggtcatgatattgtatcggcagaggcagagagaagtgag
aagcagaaacttcttggagtgtcccaagctgagatcaaacaaaaatgccagcagaggacc
aaagagctggaggaactaaagacggctgttgactcgctgaagagctcggctcaaagggcc
atggcagagagcaagaagatgtttgatgagatgatcactgccattgagaggatgaggtcg
gaggtcaccaagctgatcaatatcaacgagaaagctgcattcagtcaggccgaggggttg
atggagcgcttggagcaggagattgatgaactaaagaagaaggagactggcttaaagcag
ctctacagtacagaggaccacatccacttcttacagaatttcaactatctctgcacacca
accgatgatggcttcattcccaaagtgtctctgaacccagacttctcgttcagtgccgca
aggaaagctgtcgcagagatcaaggaaagacttgaagaactgggcagagaggaactgctg
aaggtctcgaaatcagtgaatgaagtacctgtttacacactggagaaccgcagcgttcga
gagaaaagcagccgagtcaaagacatccaaactgtggacagtgcccctccttcacagccc
aggagcaggtctgagttcttaaaatacttctgtcaactccggctggaccccagcacagcc
tataaagagctctacctgtcggaaggcaacaagaaggtaactcgaacccgcaacctgcag
tcctaccctgataatccagagcggtttgacacctttgcccaggtgttgtgccgcgaggct
ctgtctggtggccgcttctactgggagattgagtggaacggtgaattctctgttggagtg
gcctaccggggcatcagccgcaaaggcaagggtcccctttgcttgctggggtacaacgac
aaatcctggagtctcctctgctctgacacgggctactctgcctggcataaccgggtggat
aaagccatcagcgcgccacattctccaaggataggggtctacctagaccacagcgcaggg
gtactggccttctatagcatcggtgagaccatgacatgcctccatcgctttgagaccacc
ttcaccgagcccctctatcctgggtttggcgttggtacatcggttaaaatctgccagcta
aaatga
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