Pangasianodon hypophthalmus (striped catfish): 113532084
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Entry
113532084 CDS
T05759
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04150
mTOR signaling pathway
phyp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113532084 (lrp6)
04150 mTOR signaling pathway
113532084 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113532084 (lrp6)
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113532084 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
SGL
DUF5050
cEGF
Motif
Other DBs
NCBI-GeneID:
113532084
NCBI-ProteinID:
XP_026779029
LinkDB
All DBs
Position
Unknown
AA seq
1634 aa
AA seq
DB search
MKPREHRRRENGRKNMGAVLRSLFLCTFCLQIRAVPLLLYANRRDLRLVDAAQGRSANAT
VVVSGLEDAAAVDFIYGSGLIYWSDVSEEAIKRAVFNGSGSSTQSTVVSGLASPDGLACD
WLGNKLYWTDSETNRIEVAELNGTLRKVLFWQDLDQPRAIALDPGRGYMYWTDWGEIPKI
ERAGMDGTHRAVIIDTEIYWPNGLTLDYNLQKLYWADAKYNFIHRSNLDGTGREVVVKGA
LPHPFALTLYEDTLFWTDWNTHSIHSCQKQTGEERREIHSNIFSPMDIHVFSQKRQLTEV
MSPCSVKNGGCSHLCLLSPVKPYYQCACPTGVQLLEDSKTCRDGATKLLLLARRTDLRRI
SLDTPDFTDIVLHAEDIRHAIAIDYDPIDGHVYWTDDEVHAIRRSRLDGSDAQLLVTSQV
SHPDGIAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVSGYMYW
TDWGEIPKIERATLDGTERVVMVNTSLGWPNGLALDYAERKIYWGDAKTDKIEMMNMDGT
GRRILVEDKLPHIFGFTLLGDYVYWTDWQRRSIERVHKRTAEREVIIDQLPDLMGLKATY
VHQAFGTNACAENNGGCSHLCLYRPQGVACACPIGLELMGDMSTCIVPEAFLLFSRHTDI
RRISLETNSNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEF
GLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFM
YWTEWGGRPKIDRAAMDGTGRITLVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMLG
LEREVIADDLPHPFGLTQYQDYIYWTDWSQRSIERANKTSGQNRTLIQGHLDYVMDILVF
HSSRQGGWNACASTNGHCSHLCLAVPVSSYVCGCPAHYSLNDDNKTCSAPTSFLLFSQKS
AINRMVMDEQQSPDIILPIHSLRNVRAIDYDPIDKQLYWIDSKQNVIRRAQEDGNQSMTV
VSNTVGGHNLGLQPFDLSIDIYSRFIYWTSEVTNVINVTRLDGSRVGVVLRGEHDKPRAI
VVNPERGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPVALAIDNELGKLFWADMD
LRRIESSDLSGANRIVIEDSNILQPVGLTVFGNHLYWIDRQQQMIERIDKTTREGRTKIQ
ARITALTDIHAVHELHVDEYNKHPCTLDNGGCSHICIVKGDGTTRCSCPVHLVLLLDELS
CGEPPTCSPEQFSCTSGEVDCIPQAWRCDGYVECKDESDEHDCPVCSDDEFQCDSKQCVD
LSLRCNGEINCQDRSDENKCDVHCPQDQFTCNNGQCIGKHKKCDHNMDCTDNSDEIGCYP
TDEPSTQPTNTIGSIVGVVMTLFVVGAVYFVCQRVLCTQMKDDGETMTNDFVVHGPSSVP
LGYVPHPSSLSGSLPGMSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFP
PILNPPPSPATVRSQYTMEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYT
PGRRARPVSSIVMAKGYASDANYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSQ
HLYPPPPSPCTDSS
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccagggagcaccggaggcgagaaaacgggaggaaaaacatgggcgcagtgctg
cggagtctctttttgtgtactttttgtttgcaaatacgcgccgtgcccctcctcctgtac
gccaacaggcgcgacttgcggctggtggacgcggcccaaggacgcagcgccaacgccacg
gtggtggtgagtggcctcgaggatgcggcggccgtggacttcatttacggcagcggtctg
atctactggagcgatgtgagcgaggaggccatcaaacgggccgtcttcaacggctccggc
tccagcacccagagcacggtggtgtcgggtctggcctcgcccgacggtctggcgtgcgac
tggttggggaataaactttactggacagactcagaaacgaaccgcatcgaggtagccgag
cttaacgggacgctcaggaaagttcttttctggcaggacctggaccagccgagagcgatt
gctctggatccgggcagagggtacatgtactggacagactggggggaaatccctaagatt
gagagggcaggtatggatgggacgcatcgagccgtaatcatcgacaccgagatctactgg
cccaatgggctcacgttggactataacctgcagaagctttactgggccgacgccaagtac
aactttattcatcgctccaatctggatggcacagggagagaggtggtggtgaagggtgct
ctaccacacccctttgccctaacgctgtacgaagacacgctcttctggactgactggaat
acgcactccatccactcgtgccagaagcagacaggggaggagcgccgcgagatccactct
aacatcttctcgcccatggacattcatgtcttcagccaaaagagacagctcacggaagtg
atgagtccgtgctctgtgaaaaacggtggctgttcgcacctgtgcctgctttctccagtg
aagccatactaccagtgtgcctgtcccaccggcgtacagctgctggaggacagcaagacc
tgccgagacggagccacaaagctgcttctcctggcgcggcgcacagacctgcgacgcatc
tcactggacacgcctgatttcaccgacatcgttttgcatgctgaggacatccggcacgcc
atcgccattgactatgaccccatagacggccatgtctattggacagacgatgaagtgcac
gcgatccgccgctctcgtttggatggcagcgacgcgcagctgctagtcacttcacaagtg
agtcacccggatggcatcgctgtggactggattgcgcgcaacctctactggactgacaca
ggcaccgatcgcatcgaagtgacgcgtctcaatggtaccatgaggaagatcctgatttct
gaggacctggatgagcctagagctattgtcctggatcctgtctcaggatacatgtactgg
accgactggggcgagatccctaagattgagcgtgctactctggatggaaccgagcgagtt
gtgatggtgaacacttctctgggatggcccaacggcctagcgctcgactatgcagagagg
aaaatctactggggagatgctaagactgacaagatagagatgatgaacatggatggaact
ggtcgtaggatcttggttgaggacaaacttccacacatatttggcttcaccctcctgggc
gactacgtttactggacggactggcagcggcggagcattgagcgtgtgcacaaacgcact
gctgaacgggaagtaatcatcgaccaactgcctgacctcatgggcctgaaggccacctac
gtccaccaggctttcgggacaaatgcatgcgccgagaacaacggtggctgcagtcacctg
tgcctgtacaggccacagggcgtggcgtgcgcgtgtcctatcggcctggagctcatgggc
gacatgagcacgtgcattgtgccagaagccttcctgctcttctcacggcacactgacatc
cggcgtatctccctcgaaaccaacagcaacaacgtagccattccgctcaccggtgtcaag
gaggcatcggcactcgacttcgacgttaccgacaaccgcatctactggactgacatcacg
ttaaagaccatcagccgtgcattcatgaatggcagtgccctggagcatgtggtcgagttt
ggtctggactacccagagggcatggcggtggactggctaggcaagaacctgtactgggct
gacactggcactaaccgcattgaggtggcaaagctggatggccagcacaggcaggttctg
gtgtggaaagacctggacagtccacgagctttagcgctggaccctgctgaaggtttcatg
tactggacggaatggggtgggagacccaaaattgaccgtgcagccatggatggtactggc
cgcatcacgctggtgcccaacgtgggtcgtgctaatgggctcaccattgactacgctgag
agacggctctactggaccgacctggacaccacacttattgaatcttccaacatgcttggg
ctcgagcgtgaggtgatcgcagatgacttgccccacccgtttggtctcacgcaataccaa
gactacatttactggacagactggagccagcgcagcatcgagcgtgctaacaaaaccagc
gggcagaaccgcacactcatccagggccatctggactatgtcatggacattctggtgttc
cactcgtcacgtcagggaggctggaacgcctgcgcctccaccaacggccactgctcgcac
ctgtgcctggccgtgcccgtcagcagttatgtgtgtggctgcccagcgcattactctctc
aatgacgacaacaagacctgcagtgcacccacctctttcttactgttcagccagaagtca
gctattaatcgcatggtaatggatgagcagcagagccctgacatcatcctacccattcac
agcctgcgcaatgtacgagccatcgactacgacccaatcgacaagcagctctactggatc
gactcgaagcagaatgtcatccgtcgtgcccaggaggatggcaatcagagtatgaccgtg
gtgtccaacacagtggggggccacaatctgggcttgcagccatttgacctgagcatcgat
atctacagccgcttcatctactggaccagcgaggtgaccaacgtaattaatgtgacacgc
cttgacggctctcgcgttggagtggtgctccgtggagagcacgacaagccccgtgccatt
gtggttaaccctgagagagggtatatgtacttcaccaacctacaggagcgctctcctaag
atcgagcgggcagctctggacggcactgagcgagaagtgctgttcttcagtggcctgagc
aaacctgtcgccctcgctatcgacaacgagctgggcaaactcttttgggccgacatggac
ctgcgtcgcatcgagagcagtgatctgtctggcgccaatcggattgtgattgaggactcc
aacatactgcagccagtaggcttgacagtgttcgggaatcatctctactggatcgatcgg
caacagcagatgattgagcgcattgacaagacaacacgagagggccgcacgaaaatccaa
gctcgcattacagcacttacagacatccatgcagtccacgagcttcacgttgacgaatac
aataaacatccctgtaccctagacaacggaggatgctcccacatctgtatagtgaaagga
gatggtacgacccgctgctcctgtcctgttcacctggttcttttgctagacgagctttcc
tgtggagagccgcccacgtgttccccagagcagttctcgtgcacctcaggagaggtggac
tgcatcccgcaggcctggcgctgcgacggatatgtcgagtgcaaagatgaaagcgatgag
cacgactgccctgtgtgctcagacgacgagtttcagtgcgacagcaagcagtgcgtggac
ctctcgctgcgctgcaacggagagatcaactgccaggaccgctcagacgagaacaaatgc
gacgttcattgccctcaggatcagttcacatgtaacaatggtcagtgcattggcaaacac
aagaagtgcgaccataacatggactgcacagacaactctgatgaaattggctgctacccc
acagacgagccttccacccagcccaccaacaccatcggctccatcgtcggtgtggtgatg
acgctgtttgttgtgggcgccgtgtactttgtgtgccagcgtgtcctgtgcacgcagatg
aaggacgatggcgagaccatgaccaacgattttgttgtgcacgggccatcctctgtgcca
ctgggctacgtgccacatcctagctccctgtccggctctcttccaggcatgtctcgtggg
aaatctgtgattggctcattgagcattatgggtggaagcagtggaccgccgtacgatcgc
gctcatgtaacgggtgcttcttccagcagctcatccagcactaagggcacttactttcct
cctatcctgaaccctcctccttctccagctacagtgcgctctcagtacacaatggagttt
ggttactcgtcgaacagtccctccacacaccgctcatacagctacagaccatacagctac
cggcactttgctcctccaaccacgccgtgcagcacagacgtatgtgacagcgactacacg
ccaggccgcagagcacggcccgtctcctccatcgtcatggccaagggctatgcaagtgac
gccaactacgactctgagccgttcccaccaccacccacgcctcgcagccagtacctgtcg
gctgaggagaactgcgaaagctgcccgccctcaccgtacacagaacgcagctactcgcag
cacctttaccctccgcctccctcaccctgcaccgactcgtcctga
DBGET
integrated database retrieval system
