Pangasianodon hypophthalmus (striped catfish): 113536484
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Entry
113536484 CDS
T05759
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113536484 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113536484 (usp47)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113536484 (usp47)
Peptidases and inhibitors [BR:
phyp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113536484 (usp47)
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113536484 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
113536484
NCBI-ProteinID:
XP_026786236
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MEMVPSEENQLVPKEIENAAEEPRVLCIVQDTTNAKTVNERLTLNLPASTTLSKLYEDVA
HKAGYVNGTFELAWANVVDLAPLDQASEVSLVESGFEPGKRNFLQLTDKDGEQPQIASDE
SGTADSSGLDDSSQDRFIGPLSRDGTVGCSSDYSSPSYSYSSILNKSETGYVGLVNQAMT
CYLNSLLQTLFMTPEFRNALYNWEFEESEEDPITSIPYQLQRLFVLLQTSKKRAIETTDV
TRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGN
ESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARKG
LRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDLEDEKSPQTESCTD
SGAENEGSCHSDQMSNDFSTDDGVDEGICLDSTSTTERVLKPKSSLTYELFSVMVHSGSA
AGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYML
IYRLKDSSRNAKYLDVEDFPEHIKRLVQRERETEEQEKRQREIERNTCKIKLFCMHPVKM
MMMMENKLEVHKDKTLREATEMAYKLMDLEGIVPLDCCRLVKYDEFHEYLERSYEGEEDM
PMGLLLGGVKSSYMFDLLLETRRPDQVFQPYKPGEVMVKVHVVDLKSETIAAPVSVRAYL
NQTITEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSD
SEDHQATFTDSLLWKLLDRHGNTIRLFVSLPEQSPGSVAHRTSCPKLSGDSEDSFEGAKS
SGQCVEAILEESTEKLKNLSLQQQQKQQQKQSSSTSESQKSSDHSDFEHLDFPQPENQLA
SEERSDSDANNDRSTSSVDSDILSSSHSSDTLCNADGAPLPLANGLDSHSITSSRRSKAH
EGKKETWDTAEEDSGTDSEYDENGKSKTQTHYLYFRAEPYSQADAAVDGQKGLLVHVDKR
ITLAAFKQNLEPFVGVPSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALK
KGEYRVKVYQLLVNESEPCRFLLDTVFAKGMTVRQSKEELLPQLRDQCNLDLSIDRFRLR
KKTWKNPGTVFLEYHVYEEDINISSNWEVFLEVLDEPERMKSMSQLAVLTRRWCPAQMKL
EPFREVVLESSSVDELKEKLSEMSEIPIENLEFAKGRGTFPCDISVLEIHQDLDWNPKVS
TLNVWPLYICDDGAVVFYRDSTEELMELTEEERNELMKKESSRLLKTGHRVSYSPRKEKA
LKIYLDGGPSKDPGQD
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaggaaaaccagctcgtacccaaagagatagagaacgccgcc
gaggaaccccgagtgctgtgcattgtccaggacaccaccaacgccaagaccgtcaacgag
aggctgacgctcaacctcccagcttccaccaccctctccaagctttacgaagacgtcgct
cacaaagccggctacgtgaatggcacctttgagctggcatgggccaacgtggtggatttg
gctcctctggaccaggccagtgaggtgtctctggtggagtctgggttcgagccagggaag
aggaacttcctgcaactcactgacaaggacggcgagcagcctcagatagcttctgatgag
tccggcacggcggacagcagtgggctggacgacagctctcaggatcgcttcatcggaccc
ttgtcccgcgatggtacagtgggctgtagcagtgactacagcagccccagctactcctac
tcctccatactcaacaagtctgagacaggatatgtgggtttggtcaatcaggccatgact
tgctacctgaacagtttactgcagaccctgttcatgacgccagagtttagaaatgctcta
tacaactgggagtttgaggagtctgaggaagatcctattactagtatcccctaccagctg
cagaggctgtttgtgctgctgcagaccagcaagaaacgagccatagagaccacggacgtg
acgcgcagcttcggctgggacagcagtgaagcctggcaacagcacgacgtccaggaactt
tgccgggtcatgtttgacgctttggagcagaagtggaaacagacggagcaggctgacctc
ataaatcagctgtaccagggcaaactgaaggactacgtgcgctgtctggagtgtggcaat
gaaagctggaggatcgacacgtacctggacatcccgctggtcatcaggcctttcggagcc
agtcaggcttttggcagcgtggaggaagcactgcaggctttcatccagcctgaaactttg
gatgggcccaaccagtacttctgcgagcgctgcaagaagaaatgcgatgcacgcaagggt
ctgcggtttctgcactttccctacctgctgacgttgcagctgaaacgttttgactttgac
tacaccactatgcaccgaatcaagctcaacgaccgcatgactttccctgaggagcttgac
atgagcccctttattgaccttgaggacgagaaatcccctcagacagagagctgcactgac
agtggggcggagaacgaaggcagttgccacagcgaccagatgagcaacgacttctccacg
gatgatggtgtggatgagggcatctgcctggacagtaccagcaccactgagagggtactt
aagccgaagagctcactgacctatgagctcttttcggtaatggtgcattctgggagcgcc
gcaggtggacactactacgcctgcatcaagtccttcagcgatggccagtggtacagcttc
aacgaccagcacgtcagcaagatcacacaggacgacatcagaaagacgtatggtggttcc
tcagggagcagaggctattactctagtgcctttgccagctccacaaacgcatacatgctc
atttatagactgaaagattcctcaaggaatgcaaagtacctcgacgtggaagacttccca
gagcacataaagcgtctcgttcagagagagcgtgagacagaggagcaggagaagagacaa
agagagatcgaacgcaatacctgcaagatcaagctcttctgcatgcatcctgtcaagatg
atgatgatgatggagaacaagctggaggttcacaaggacaaaacactccgagaggccaca
gaaatggcatacaagctgatggatcttgagggtatagttcctctggactgctgtcgcttg
gtgaagtatgatgaatttcatgaatatctggagcgctcatatgagggggaggaggacatg
cccatggggctgctacttggcggggttaaatcctcctacatgttcgatttgctactagag
acccgccgacccgaccaagtgttccagccttataaacctggagaggtgatggtgaaggtc
catgtggtggatctgaagagcgagaccatcgctgctcctgtcagtgtcagggcatacctg
aaccaaaccattacagagttcaagcaactcattgcacaagccaccgggctgtccgcagaa
accatgcgagttgtcctggagcgctgctataatgacctccggcttctctatgtgcccaac
aaaacactgaaagctgagggtttcttcaggagtaacaaggtttttgtggagagctccgac
tcggaggatcaccaggccacgttcactgactcgctcctgtggaagcttctggaccgtcac
ggcaacacaatcagactgtttgtttcactcccggagcagtctccaggctccgtggcccac
agaactagttgccccaaattgagtggcgactctgaggactcgtttgagggggctaaaagc
agcggccaatgcgtagaggccatactggaggagagcacagagaagttaaagaacctttcc
ctccaacagcagcagaagcagcagcagaagcaatcctccagcaccagcgagagccagaag
agttcggaccacagcgattttgagcacctcgatttcccacagcccgagaaccagctggct
tcggaggaacgctccgactcggatgccaacaacgaccgcagcaccagctccgtggactcg
gacatcctgagctcgagccacagcagcgacacgctgtgcaacgctgacggtgcacccctg
cctctggccaacggcctcgactcgcacagcatcaccagcagccgccgctccaaagcccat
gagggcaagaaggagacatgggacacagctgaggaggactcgggcaccgacagcgaatat
gacgagaacggcaagagtaaaacacagacgcattacctgtacttcagagcagaaccgtac
tcacaggcggatgctgctgtagatggacagaaaggtttacttgtccatgttgataaaagg
atcacactggcagcgttcaagcagaacctggagccattcgttggagtcccctctacccag
tttaaggtcttccgggtctacgccaacaaccaggagtttgaaagcgtgcgactcaacgag
actctttcttctttctcggatgacaataagatcaccattcggttaggacgagccctaaag
aaaggggaatacagggtaaaggtgtaccagctgttagtcaatgaatcggagccttgtaga
ttcctgctggatactgtgttcgctaagggaatgacagtgaggcagtctaaagaggagttg
ctaccccagctccgagaccagtgcaacctggaccttagcatagacaggtttcgactcagg
aagaagacatggaaaaacccaggcacagtgtttctggagtatcacgtttacgaggaggac
atcaatatctctagtaactgggaagtcttccttgaagttcttgacgaaccggagcggatg
aagtccatgtctcagttggcggtgctgacacggcgctggtgtccggctcagatgaagctg
gagcccttccgagaggtggtgctggagagcagcagtgtggatgaactcaaggaaaagctc
agtgaaatgagtgagattcctattgaaaacttagagttcgccaagggacgaggaacattt
ccttgcgacatatctgtgttggagatccaccaggatttagactggaatccgaaggtttcc
acactcaacgtctggcctctctacatctgcgacgatggtgcggtggtgttttacagggac
agcactgaggagctcatggagctcacggaagaagagcgcaacgaactgatgaagaaggag
agcagccggctgctgaagacgggccaccgggtcagttattctccccgcaaagagaaagct
ctcaagatctacctagacggagggccttctaaagacccgggccaggactga
DBGET
integrated database retrieval system
