Pangasianodon hypophthalmus (striped catfish): 113536916
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Entry
113536916 CDS
T05759
Name
(RefSeq) rho-related BTB domain-containing protein 1-like isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113536916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113536916
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
phyp04031
]
113536916
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
113536916
GTP-binding proteins [BR:
phyp04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
113536916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTB
Ras
Roc
FAM186A-B_N
Motif
Other DBs
NCBI-GeneID:
113536916
NCBI-ProteinID:
XP_026786879
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MWVNSGSVGRALSMDIDTDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLA
THVPTVWAIDQYRVCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCF
SLANPNSLRHVRTMWYPEIKHFCPRTPIILVGCQLDLRYADLDAVNRARRPLAKPIKPTD
ILPPERGHEVAKELGVPYYETSIVAQFGVKDVFDNAIRAALISRRHLQFWKSHLKKVQRP
LLQAPFLPPRPPRPVVGIPDPPPMDGEGPDSLFCQPLCADVLFLLQGGATRVFAHKVYLA
TSCSKFYDLFTMDLGSTEEDKDGDETLEGGEEEEQSRRGAKEQAGRAKSLDIDKDGDGGT
KGSRRLLLLEQGSMRTSQSDNALPARGHYPVGSLGTGRPLSGWGRGFLGVYLEKVDDPVT
GRPRLMTVVSMDELIQEAPFRAVLQYLYTGHLDEGRSDLMQVATIAELLEVFDLRMMVAN
VLNRESFMNQEITKAFHVRRANRIKECLSKGTFADVLASEDVVFQLDDGYLPAHKPLLIS
SCDWMAAMFRGSFMESYIEEVSIPNTSTACMRAVLEYLYCGLLTPCSELEPIDLIILANR
LCLPRLVALTEQHAVEELLQWAVKGADIDGQVLAYLETAQFHNAKQLSAWCLHHICTNYN
SVCRKFPKDMKTMCPENQKHFEKQRWPPVWFLKEEDRYNRSKKEREREEEILRKQHTKRG
WCFWRHPSSSAPHIS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcaattctggaagcgttggaagggccctctccatggatatagacacagactat
gaaaggcctaatgtggagactataaagtgtgtggtggtgggtgataacgctgtgggcaaa
acccgccttatttgtgctcgtgcctgcaatgccaccctcacgcagtaccagctgctcgcc
acccacgtgccaaccgtgtgggccatcgaccagtaccgtgtgtgccaagaggtgttggaa
agatctagagatgtggtggatgaagtcagcgtgtctctcaggctgtgggacacattcgga
gaccatcacaaagacagacgatttgcttatggcaggtctgatgtggtggtgctctgcttc
tccttggctaacccgaactcactccgccacgtccgtaccatgtggtaccccgagattaag
cacttctgtccccgcacccccatcatcctggtgggctgtcagctggacctccgttatgct
gacttagacgcagtgaaccgagcccgtaggcccctggccaaacccataaaacccactgac
atccttccaccagaacgaggccatgaggtggctaaagaattaggtgtgccctactacgag
accagcattgtcgcccagtttggtgtcaaggatgtctttgacaatgccatccgcgcagca
ctgatttctcgtcgccacctccaattctggaagtcccatttaaagaaggtccagaggcct
cttcttcaggccccctttttgcctcccaggcccccacggcctgtagtagggatccccgac
ccacctcccatggatggagaaggcccagactctctcttctgccagcctttatgcgcagat
gtgctgttccttctccaaggtggtgccactcgtgtttttgctcataaagtctacctagcc
acttcctgttccaagttctatgacctgttcaccatggacctaggatctacagaggaggac
aaggatggagatgagactctggaaggtggtgaggaggaggagcaaagtcgaagaggagcc
aaagagcaggcaggacgtgccaagagccttgacattgataaagatggtgatggggggacc
aagggtagcaggagactgcttttgctggagcagggctcaatgaggacttcccaaagtgat
aatgccctcccagccaggggccattaccctgtggggtccctggggaccggccgcccactt
tcaggatggggccgggggttccttggtgtgtatctggaaaaggtggatgacccagtaaca
ggtcgaccaagactcatgacagttgtgtccatggatgaactcattcaggaggcacctttc
agggccgtgctgcagtacctgtatacaggtcacctagatgaaggccggagtgacctgatg
caggtggccaccattgctgagcttctggaggtttttgatctgcgcatgatggtggccaac
gttctgaaccgtgagagcttcatgaaccaggaaatcaccaaagccttccatgtgcgtcgg
gccaaccgaatcaaagagtgcctgagcaaaggcacctttgctgatgttcttgccagtgaa
gatgtggtgttccaactggacgatggctacctacctgcccacaagcctctgctcatctcc
agctgcgactggatggcggccatgttccgtggatctttcatggagagctacattgaggag
gtgtccatacccaacaccagtactgcctgtatgagagctgtgctggagtatctgtactgt
ggcttgctcacgccctgctctgagttggagccgattgacctcataatacttgccaaccgt
ctctgcctgccccgccttgtggctcttacagagcaacatgcggttgaagagctcttgcag
tgggcagtaaaaggagcagatattgatggacaggtgctggcttacctagaaacggctcag
ttccacaatgccaaacagctgtctgcctggtgcctccatcacatttgcaccaactacaac
agtgtgtgtcgcaagttccccaaagacatgaagaccatgtgtccagaaaatcagaagcac
tttgagaagcagcgctggccccccgtctggttcctcaaggaggaagaccgctacaaccgc
tcaaagaaggagcgtgagcgtgaggaagaaatcctgcgcaagcagcacaccaagcgtggc
tggtgcttctggagacacccgtcctcctctgcaccccacatctcctga
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