Pangasianodon hypophthalmus (striped catfish): 113536939
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Entry
113536939 CDS
T05759
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113536939
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113536939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PRP1_N
U-box
zf-RING_5
zf-RING_10
zf-RING_6
eIF3_subunit
Motif
Other DBs
NCBI-GeneID:
113536939
NCBI-ProteinID:
XP_026786918
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MAEASISADQFSVDQFSCPVCLDLLKDPVTLPCGHSFCKVCINGCWDHKDQKGVYSCPQC
RDTFTPRPVLHRNNMLAEVVEKLKKTELQAASPAHCYAGPGDVECDFCTGRKHKAVKSCL
MCLTSFCESHLKPHLEISGLKKHTLIEASAKLQEKICSQHNEVLKIYCRTDQTCICYLCT
MDNHKGHDTITATAERAEKQSEVKEEQMKSQQRIQEKQKKVQELKQAVNTIKLSAQTAVE
DSERIFTELISSMEKKRSEVMELIRAQEKAELSRAERLLEQLEQEIADLQRRVTELEQLS
HTHDHIHFLQALASGRHSPTIIRPTFHTSSITVHQHLSFDGVRNSLSDLKKRLEECCEEE
FNKIPPHAAAVQIISLPEPQSREDFLKYFCYLTLDPNTVHRNLILSEKNRAVRYSEREQQ
YSDHPERFDFCEQVLCKESVCGRCYWEVEWSSAGFVSISVSYKDISRKGRGDECVFGFNN
QSWSLWCSSSSSLCFYHNSIETDLRVPSSSRIGMYVDHSAGTLSFYSVSDTMKLLHRVHT
TFTQPLYAGFRPDWFSTVRLCDPK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagtatttcagcagatcaattttcagtggaccagttcagctgtccagtc
tgtctggatctcctgaaggatccggtgactctcccctgtggtcacagtttctgtaaggtg
tgtattaatggctgctgggatcataaggatcagaagggcgtctacagctgtcctcagtgc
agagacactttcactccaaggcctgttctacacagaaacaacatgctggctgaagtggtg
gagaaactgaagaagactgaacttcaagctgcttctcctgctcactgttacgctggacct
ggagatgtggagtgtgatttctgcaccgggagaaaacacaaagccgtcaagtcctgtctg
atgtgtttgacttcattttgtgaaagtcatctgaaacctcatctggaaatttctggttta
aagaaacacacattaattgaagcctcagcaaaactacaagagaagatctgctctcaacac
aatgaagtgctaaagatctactgtcgtactgatcaaacctgcatctgttatttgtgtacg
atggataatcacaaaggtcacgacaccatcacagccacagcagaaagagctgagaaacag
agtgaggtaaaggaggagcagatgaaatcccagcagagaatccaggagaagcagaagaag
gtgcaggagctgaaacaggctgtgaacactataaagctgagtgcacagacagcagtggag
gacagtgagaggatctttactgagctgatcagctccatggagaaaaagcgctcagaggtg
atggagctgatcagagctcaggagaaggctgaactgagtcgagctgaacgactcctggag
caactggagcaggagattgctgatcttcagaggagagtcactgagctggagcagctttca
cacacacacgatcacatccatttcctccaggctttagcttctggacgtcactctcccaca
attatcagaccaacgtttcacacatccagcatcactgtccatcaacatctctcatttgat
ggagtgaggaattctctctcagatctgaagaagagactcgaggaatgctgtgaagaggaa
ttcaacaaaatccctccacatgctgcagcagttcagatcatttcactaccagagccacag
agcagagaagattttctgaaatatttctgttatctgactctggatcccaacacggtacat
cgtaacctcattctgtctgagaagaacagagcggtgagatacagtgagagagagcagcag
tactctgatcatccagaaagatttgacttctgcgaacaggtgttgtgtaaggagagtgtg
tgtggacgctgttactgggaggtggagtggagcagtgctggttttgtgtccatatcagtc
tcatataaagacatcagcaggaaaggacggggtgatgagtgtgtgtttggattcaacaat
cagtcctggagtctgtggtgttcttcttcttcttctctgtgtttctatcacaacagcatt
gagactgatctcagagttccatcatcctccagaataggaatgtatgtggatcacagtgca
ggaactctgtccttctacagcgtctctgacacgatgaagctcctccacagagtccacacc
acattcactcagcctctatacgctgggtttaggcccgactggttttctactgtgagattg
tgtgatccaaaataa
DBGET
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