Pangasianodon hypophthalmus (striped catfish): 113538151
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Entry
113538151 CDS
T05759
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04310
Wnt signaling pathway
phyp04520
Adherens junction
phyp04916
Melanogenesis
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113538151 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113538151 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
113538151 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113538151 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113538151 (lef1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
113538151 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
113538151
NCBI-ProteinID:
XP_026788827
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MPQLAGGGGGGDPELCATDEMIPFKDEGDPQKEQSFAEITNSEEEGDLAELKSSLVNESE
TSPNSNSHDAARQSQITPDSYHEKHREHPDDGKLQDLYSKGHAYSAYPSYIMMTNMNNEP
YMNNGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHSAHHPQDSKGMPRH
HPGPDIPNFYSLSPGGVGQITPPLGWFPHHMVPGPPGPHATGIPHPAIVNPQVKHEPPHE
TDLMHMKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRR
WHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESATGTAQRMKT
AYI
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctggcgggtggcggaggcggcggagacccggagctctgcgccaccgacgag
atgatcccgttcaaggacgagggagacccgcagaaagagcagagcttcgccgagatcacc
aactccgaggaggagggagacctggccgagctcaagtcctctctggtcaacgagagtgag
acgagtccgaacagcaacagccacgacgcagctagacagtcccaaataaccccagactcc
tatcatgaaaaacacagagagcatccggatgatggaaagctccaagatctgtacagtaaa
ggacatgcctactctgcttacccaagttacatcatgatgaccaacatgaacaacgaaccc
tacatgaacaacggctcgctctcgcctcccatgcccagaacgtcaaataaggttcctgtg
gtgcagccgtcccacgcagttcaccccctcacacctctgatcacctatagcgatgagcac
tttgcccccggccctcactccgcgcaccacccacaggactccaaaggaatgcctaggcat
catcctggtccagatattcctaacttttactcactctcccctggaggagttggacagatc
accccaccactgggctggttcccacatcacatggttccaggacctcctggacctcatgcc
acgggaatcccccaccctgccatcgtcaacccacaagtcaaacacgagcctccacacgag
acagacctgatgcacatgaagcctcagcacgagcagagaaaggagcaggagcccaagagg
cctcacatcaagaagccactcaacgccttcatgctttacatgaaagagatgcgtgccaac
gtggtggctgagtgcacactgaaggagagcgctgccatcaaccagattctaggcagaagg
tggcatgctttatctcgggaagagcaagcaaagtattatgaattagcccgcaaggaacgg
cagctccacatgcagttatacccaggctggtctgctagagacaattacggaaagaagaag
aaaaggaagagggagaagctccaggaatcagccacaggtacagcccagagaatgaaaacg
gcgtacatctga
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