Pangasianodon hypophthalmus (striped catfish): 113539312
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Entry
113539312 CDS
T05759
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113539312
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113539312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
PRP1_N
zf-RING_10
DUF6591
Zn_ribbon_SprT
zf-RING_11
CCDC22_CC
AAA_24
Motif
Other DBs
NCBI-GeneID:
113539312
NCBI-ProteinID:
XP_026790813
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MAEASISIDQDHFSCPVCLDSLKDPVTTPCGHNFCKVCINGFWDQEDVKGIYSCPHCRET
FTPRPVLHRNNMLAEVVEKQNKAELQAASPAHCYAGPGDVKCDSCIGRKRKAINSCLVCK
ASYCEDHLQPHYQSPACKKHKLVEACAELQEKICSQHDKAIEIYCRTDQSFICFLCTMDE
HKGHDTVSTKAERTEKQNELKEEQMKSQQRIQEKQKKVQELKQTVDTIKKRSQAAVDDSE
RIFTELISSMEKKRSEAKNLIRAQEKAELSRAERLLKQLEQEIADLKRRVTELEQLSHTH
DHIHFLQSFPSLCVSPGCEDSPSITVNQHLSFDGVRKSLSDLKKQVKQICEKEFNKIRPQ
AAAVQTLPSQLKNKEGFLQYFYYLTLDPNTAHCRLILSDKNRVVTYSRTEQRYSDHPERF
DSWPQVLCKESVCGRRYWEVEWNGERWVYISVSYKEISRKGQGYECLFGHNSQSWSLECS
SSSVSFWNDKIKTELRGPASSRIGVYVDHSAGTLSFYSVSDTMRLLHRVQTTFTHPLYAG
FCVGNNSTVRLCDRK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagtatttcaatagatcaggatcatttcagctgtccagtgtgtcttgat
tctctgaaggatcctgtgactactccttgtggccacaatttctgtaaggtgtgtattaat
ggcttctgggatcaggaggatgtgaagggcatctacagctgcccccactgtagagagact
ttcactccaaggcctgttctacacaggaacaacatgctggctgaagttgtggagaaacaa
aataaggctgaactccaagctgcttctcctgctcactgttacgctggacctggagatgtg
aagtgtgattcctgcattggaagaaaacgcaaagccattaattcctgtctggtatgtaag
gcttcctattgtgaagatcatcttcaacctcactatcagtctcctgcctgtaagaagcac
aagttagttgaagcctgtgcagagctccaagagaagatctgctctcaacatgacaaagcg
atcgagatctactgtcgtactgaccaaagcttcatctgttttttgtgtacgatggatgag
cacaaaggccatgatacggtttcaactaaagcagaaagaactgaaaaacagaatgagcta
aaggaggagcagatgaaatcccagcagaggatccaggagaagcagaagaaggtgcaggag
ctgaaacagactgtggacactattaagaagcgttcacaggcagcagtagatgacagtgag
aggatctttactgagctgatcagctccatggagaaaaagcgctcggaggcgaagaacctg
atcagagctcaggagaaagctgaactgagtcgagctgaacgactcctgaagcaactggag
caggagattgctgatcttaagaggagagtcactgagctggagcagctttcacacacacac
gatcacatccacttcctccagagtttcccgtctctctgtgtttctcctggatgtgaggac
tcacccagcatcactgtcaatcaacatctctcatttgatggagtgaggaaatctctctca
gatctgaaaaaacaagtcaagcaaatctgtgagaaggaattcaacaaaatccgtccacaa
gctgcagcagttcagacattaccttcacagttgaaaaacaaagagggttttctgcagtat
ttctattatctgactctggatcccaacacagcacactgtcgactcattctgtctgacaag
aacagagtggtgacatacagtaggacagaacagcgatactctgatcatccagagagattt
gactcctggcctcaggtgttgtgtaaggagagtgtgtgtggacgccgttactgggaggtg
gagtggaacggtgagagatgggtgtacatatcagtctcatataaagagatcagcaggaaa
ggacagggttatgagtgtttgtttggacacaacagtcagtcctggagtctggagtgttct
tcttcctctgtctctttctggaatgacaaaattaagactgagctccgaggtccagcgtcc
tccagaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctct
gacacgatgaggctcctccacagagtccaaaccacatttactcaccctctatatgctgga
ttctgtgtaggaaataactcaactgtcaggttatgtgatcgaaaatga
DBGET
integrated database retrieval system
