Pangasianodon hypophthalmus (striped catfish): 113539560
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Entry
113539560 CDS
T05759
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
phyp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113539560
03015 mRNA surveillance pathway
113539560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113539560
Enzymes [BR:
phyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113539560
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113539560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
113539560
NCBI-ProteinID:
XP_026791185
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MATDSWAQAVDQQEAAAESISNLQLNEKEDKPKAEENGAKAEGEGEKTEEEEKEDKAAQS
LLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNRWPQCLCVSPTYELALQTGK
VIEQMGKFYPEVQLVYAIRGNKLERGVKLQEQIVIGTPGTVLDWCQKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKTCQMLLFSATFEESVWNFAKRIIPDPNIIKLKRE
EETLDTIKQYYVMCNSREEKFHALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQV
ALLSGEMQVEQRAAVIERFRNGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSRFSMNVLNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctacggattcctgggctcaggctgtggatcaacaagaagctgcagctgagtcgata
agcaaccttcaattaaatgaaaaggaagacaaaccaaaagcagaggaaaatggagccaag
gccgagggagaaggagagaagactgaggaggaagaaaaagaggacaaagcggctcagtca
ctgttgaacaagttgatacgaagcaatttagtgaacaccaccaaccaagtggaagttctt
cagagggatccgaactctccgctttactcggtcaagtcatttgaggagctgcgattgaaa
cctcagctacttcaaggtgtttatgccatgggcttcaacagaccctccaaaatccaggag
aatgccttgcccatgatgcttgcagaacccccacagaatcttatagcgcagtctcagtcg
ggtacgggtaaaactgccgccttcgtcctggccatgctcagtcacgtggatcccaacaac
agatggcctcagtgcctgtgtgtgtcgcctacatacgagctcgccctccagacgggcaag
gtcatcgagcagatgggcaaattttaccctgaagtccagttggtgtatgcaatccgagga
aacaaattggagagaggggtgaagctccaggagcagattgtgatcggcaccccaggcaca
gtcctggactggtgccaaaagctcaaattcatcgacccaaagaaaattaaagtgtttgtt
ctggacgaggcagacgtcatgatcgccacacagggtcaccaggaccaaagtattcgcatc
cagaggatgttgcccaaaacctgccagatgctcttgttctcggccacattcgaggagtct
gtgtggaacttcgccaagcggatcatccccgacccaaacatcatcaaactgaaaagggag
gaggagacgctggacaccattaagcagtactacgtgatgtgcaacagcagggaggagaag
ttccacgccctgtgtaacatctacggtgccatcactatcgcacaggccatgatcttctgt
cataccaggaaaacagcggggtggctagcaggagagctgtctagggagggccaccaggtg
gcgctactcagtggagagatgcaggtggaacagagagcggctgtgatcgagcgtttccgc
aacggcaaagagaaagtcctggtcactacaaacgtctgtgccagaggtatcgatgtggag
caggtctctgtggttattaatttcgatttacccgtggacaaggatggaaaccctgacaat
gagacgtacctgcaccggatcgggcgcacagggagatttggcaagagagggctggcaatc
aacatggtggacagcaggtttagcatgaacgttctcaatcgcattcaggagcatttcaat
aagaaaattgaaaaactggacacggatgatttggatgaaatcgagaaaatagcgaactga
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