Pangasianodon hypophthalmus (striped catfish): 113540498
Help
Entry
113540498 CDS
T05759
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113540498 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113540498 (dysf)
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Others
Ferlins
113540498 (dysf)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113540498 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
FerA
FerI
PI3K_C2
Pex24p
CEP76-C2
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
113540498
NCBI-ProteinID:
XP_026792834
LinkDB
All DBs
Position
Unknown
AA seq
2124 aa
AA seq
DB search
MLRCLLQRATHLKNVEKGERQSDPLASITFRGSKKKTKVVKNNVNPVWNEGFEWDLKGVP
LDSAAELHVVVKDHEKMGRNRFLGECRVSLRDVLNSPNLAATFTVSLVDTKRNNTGATVT
LQVSYIPPPGMAPIFQPPPQPETPHNTAELDTVTVFSLDTMGDEDTESMLMVEVAEEPEP
VPGPQGQEIGAPHTPPKKVPPAFTHGIKKKKQQSNKAPLSNKPQDLQVRVRIIEGRQLPG
INIKPVVKVTVGGQTKRTRIKKGNNPFFDETFFLNFFETPTDLFDEPIFITVFDSKSLRT
DSVIGEFKLDVGMVYNEHRHAILRKWLLLADPDDFCAGARGYLKVSLIVLAAGDEPPTEK
EGVQEREDIEANLLRPAGLTLRGATFTLKVYRAEDLPQMDDAFMDGMKQFLGFESNRKNL
VDPFVEVNFAGKTMCSKILEKNANPQWNQSLVLPIRFPSMCEKMRIRILDWDRASHNDVI
GTTHLSISKISAPGGEIEDDLPPRTLQSAIDDSLGFLPTFGPCYVNMYGSLREFTAFSDP
HEALNLGKGEGVAYRGRVLLELTTKLCERAEQKMEDIYPDDLLVVEKFMRKRKYSLFAAF
YSATLLQDVDDAIQFEVSIGNYGNKFDYTCLPLASTTQYSRAVFDGCHYYYLPWGNVKPV
VVLSSEWEDIKPRIEALNMLLIITERLESNLNLVQLELQAGGDQDRLEERVVKLLDELIS
DCSEELPELDGWPCVTPLDKALRRLRKVNLQQIEQAALALKHGQETELSTVLEQAEDWAM
RLRSLTEEPQNSLPDIVIWMLQGDKRVAYHRIPAHEVLFSQGYCGKHCGQLQTVFMKYPQ
GGSEDCKIPAQVRVKVWFGLAADVKHFNQFSEGKLSVFAETYENQTKLALVGNWGTTGLT
YPKFSDITGKVKLPKESFKPSPGWAWAGDWYISPEKTLLYDVDAGHMTFMEEVFENQMRL
PGGQWIGMPEGYTDVNGEKAVPKDDIECPPGWMWEDEEWSKDLKRAVDDQGWEYGITIPP
DRRPKSWVPAEKMYHTNRRRRWIRLRRRDLQKMEALRKQRPDESEREGWEYASLFGWKFH
LKQRKTDSFRRRRWRCRMEPLEKTGPAAIFALECSLGNVTDDKNDDKSVTTTFGVNRPTI
SCFFDSGTRYHLRCYLYQARDLLAMDKDSFSDPYAIVSFLHQSQMTVTIRNTLNPTWDQT
LIFYEVEIFGDPKVTEKNPPNIVVEVYDQDTYGADEFMGRSICQPSVVSSPRLAWYPILK
GGKAAGELLAAFELIRRDKPAIHHIPGQEGDLVSHSHIMDELVFPAAFSESLQQWPEDSD
LPYPPPQRQPNVFMVPHGIKPVLERTAIEILAWGVRNLKSFQLASVTSPSLQVECGGCMV
QSCVIRNTKKNPNFDVNTLFIDVRLPREELYMPPLVIKVIDNRQFGRKPVVGQCTIRSLE
EYRCHPENQDEEPTEEELETIPHTPRDDVLIDIDDKEPLIPGQLADGTSSAIINISPSRS
SLHMIHWEDEFMDWWSKFYASTGERKKCGSYLEKGLDTLQVYDTELEKVDGFEQLADFCQ
TFKLYRGRTQESESDDPSIVGEFKGMFKIYPLPEDSSAPSPPRQFCLLPPNGIEECLVRV
YIIQAYGLQPKDTNGKCDPYIKITLGKKSVNDHDNYIPCTLDPVFGKMYELTCSLPLEKD
LRIMLYDYDMLSKDEKIGETVIDLENRFLSRYSARCGLPQSYCVSGVNQWRDQLKPTQLL
HRLCQRRNYKLPVYKHDRVIFRGHEHTTADLVDEAKPENPHLGPLEERLALLVLRRQGLV
AEHVETRPLYSPLQPDIEQGRLQLWVDLFPKSLGPPGPPFNITPRKAKKFFLRCIIWNTS
DVILDDVSVTGERMSDIYVKGWMHGHEGNKQKTDVHYRSLGGEGNFNWRFLFPFHYLPAE
QLCTVDKKEHFWSLDKAETKVPPKLTVQIWDNDKFSFDDYLGCLEMDLNHMLKPAKSPEK
CGLELLSQPQDKLVSLFEQKTVKGWWPCVCDRQGEKILAGKVEMTLEIVSEQEQEERPAG
LGREEPNMNPRLEEPQRPETSFLWFSSPYKTLKFIVWRRFKWFILGLIILFFILLFLGVF
LYSFPNYAAMKMVGPFSGIGNGKQ
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggtgtctgctccagagagcgactcacctgaagaatgtggagaaaggggagcgg
caaagtgacccgttagccagcatcacatttagagggtctaagaagaagaccaaagttgtt
aaaaacaatgtcaaccctgtgtggaatgagggttttgaatgggacctaaaaggagtgccc
ttagactcagcagcagagctgcatgtggttgtgaaggaccatgaaaaaatgggaaggaac
aggtttctgggggaatgtcgggtttctttaagagatgtactcaactccccaaacctagca
gctaccttcactgtatccttagtggacaccaagaggaacaacactggggccacagtgact
ctgcaggtttcctacatccctcccccaggcatggctcccatctttcagcccccaccacag
ccagagacgccgcacaatactgcagagctggacactgtcacagtgttctcattggacact
atgggagatgaggacacagagagtatgctcatggtggaggtggcagaggagcctgaacct
gttccaggaccacaaggccaggagatcggggctcctcatacaccaccaaaaaaagttcct
ccagcatttacacatggcattaagaagaagaaacagcaaagcaacaaagccccactttcc
aacaaaccccaggacctccaggtacgggtgcgaatcatcgagggaaggcaactgcctggc
atcaatattaaacctgttgtcaaagtaactgtgggaggccagacaaagagaacacgcatc
aagaaaggcaacaatccattctttgatgagaccttcttcctgaacttcttcgagacacca
acagatctctttgatgagcctatatttataacagtatttgactccaagtctcttcgtaca
gactctgtcattggagaatttaagctggatgttggcatggtgtataacgaacacagacat
gctattctcaggaagtggctgttgctggctgatcccgatgatttttgtgctggggcaaga
gggtatctgaaggtcagccttatagtcctggctgcaggtgatgagccaccgactgaaaaa
gagggtgttcaggaaagagaggacattgaggcgaacctgctgagaccagcagggctcaca
ctcagaggagccaccttcactcttaaagtctacagagcagaggatttgcctcagatggat
gatgcatttatggatggcatgaagcaatttctgggttttgagtcaaaccgaaaaaacctg
gtggatccatttgtggaagtcaactttgctggcaaaacgatgtgcagtaagatattggag
aagaacgccaacccacagtggaaccaaagtcttgtgctccctatcagatttccgtctatg
tgtgagaagatgaggatacgcattttagattgggatcgagcaagccacaatgatgtcatt
ggcaccacacacctgagtatatcaaagatatctgctccaggcggggaaatagaagatgac
ttgccccccaggaccctccaaagtgccattgatgacagcctgggcttcctgccaaccttt
ggcccctgttatgtgaatatgtatggaagtcttagagagttcactgccttctctgacccc
cacgaggctcttaaccttggcaagggtgaaggtgtagcgtatcgtggccgtgtgctcttg
gagctcaccactaagctgtgtgaacgagcggaacaaaaaatggaagacatttaccctgac
gaccttctggtggtagagaaattcatgcggaagagaaagtactctctgtttgctgctttt
tactcggccacccttcttcaggacgtggatgacgccatccagtttgaggtcagcatcggc
aactatggcaacaagtttgactacacctgcctgcctctggcctccacaacgcaatacagc
cgagctgtgtttgatggctgtcactactactacctgccctgggggaatgtgaagcctgtg
gtggtgctgtcgtcagagtgggaggacatcaagccccgtatagaggcccttaacatgctg
ctgatcatcacagagcgtctggaatcaaacctgaatcttgtgcagttggagcttcaagca
ggcggtgaccaggacagactggaggagagggtggttaaactactggatgagctcatctct
gactgcagtgaggagctgcctgagctggacggatggccatgcgtgacccctctggataaa
gctctgcggcgtttgcgtaaggtgaacctgcagcagattgagcaggccgctctggcgcta
aaacacggccaggagacggagctgagcacagtgctggagcaggctgaggactgggccatg
agactgcgctcactcactgaggagccccagaacagtctgccagacatagtgatctggatg
cttcagggggacaaaagagtggcgtaccacagaatcccagcccacgaggtgctcttctct
cagggttactgcggcaaacactgtggtcagctgcaaactgtcttcatgaagtaccctcag
ggtggtagcgaggactgtaagatcccagcacaggtcagagtgaaggtgtggtttggtttg
gctgctgacgtcaagcacttcaaccagttttcagaggggaaactgtctgtgtttgcagag
acatatgagaaccagactaaattagctctggtgggaaactggggcacaacagggctcact
taccccaaattcagtgacatcaccgggaaggtgaagctgcccaaggagagttttaaaccc
tcgccaggctgggcatgggctggagattggtacatcagcccagagaaaaccttgctatat
gatgtggacgcaggacacatgacttttatggaggaagtgtttgagaatcagatgcggctg
ccgggaggacaatggattggcatgccagaaggttacacagatgtgaatggagagaaagcg
gtgcctaaagacgatattgagtgtcctccaggctggatgtgggaagacgaggaatggagt
aaagatctaaaacgggctgtagatgatcaggggtgggagtatggcattaccatccctcct
gaccgtcggcctaagtcttgggttccagctgagaaaatgtaccacaccaatcgccggcgt
cgctggatccgccttcgccgccgagacctgcagaaaatggaagcactgagaaagcagcgt
ccagatgagtcggagcgggagggttgggaatatgcctctctctttggctggaagttccac
cttaagcaaaggaagacggattcgttccgccgtcgccgctggcgttgccgcatggagcct
ctggagaagactggtccggcagccatctttgccctggagtgctcactgggcaatgtgact
gatgacaaaaatgatgacaagtctgtcacaacaacctttggtgtcaatcgtcccaccatc
tcatgcttctttgatagtggaacacgctaccatctgcgctgctatctgtatcaggctaga
gacctgctggctatggataaagacagtttctcagatccctatgccattgtgtcattcctg
caccagagccagatgacagtgaccataaggaacacgcttaaccccacctgggatcagact
cttatcttctatgaggtggagatattcggagatcccaaagtgacagagaagaacccgcca
aacattgtagtggaggtctacgatcaagacacttatggagcagatgagtttatgggacgc
agtatatgccagccctctgtggtctcctctcctcgtctggcgtggtatcctatcctgaaa
ggtggcaaagctgctggtgaactacttgccgcatttgaactgatccgcagagataagcct
gcaattcatcacatccctggtcaagagggtgaccttgtctcccattctcatattatggat
gagcttgtatttccagcggccttctctgagagtttgcagcaatggccagaagactcagat
ttaccgtacccgcctccacagagacagccaaatgtcttcatggtgccacacggcatcaaa
cctgttctagagcgcactgctattgagatcctggcatggggggtgcgtaacctgaagagc
ttccagctggccagtgtgacatcccccagcttgcaggtcgaatgtggaggttgtatggtg
cagtcctgtgtcatccgcaacactaagaagaatcccaactttgacgtcaacacactcttc
attgatgtgcggctgcccagggaggaactctacatgcctccactggtgatcaaggtgatt
gacaaccggcagtttggcaggaagccagtggtgggccaatgcaccatccgctctctggag
gagtaccgctgccaccctgagaaccaggacgaagagcccacagaagaggagctggaaaca
attcctcacacaccaagagatgacgtactgattgacattgatgacaaggaacctctcatt
cctggacagctggcagatggcaccagttctgctattattaacatttcgccttctcgctcc
agcctccatatgatccactgggaggatgagtttatggattggtggagtaagttctatgcc
tcgacaggagagaggaaaaaatgtgggagctatctggagaaaggcttagacactctacag
gtgtacgacactgaactggaaaaagttgacggctttgagcagctggcagatttctgtcag
acgttcaagctttaccgtggacgcactcaggagagtgagagtgatgatccctccattgtt
ggagagttcaagggcatgtttaagatctacccattaccagaagactcatcagctccttca
cccccgcggcagttctgtctccttcctcctaatggcatagaggagtgtttagttcgggtg
tatattattcaggcttatggcttgcagcccaaagacaccaatggcaagtgcgacccatac
atcaagatcacattagggaagaaatcagtaaacgatcatgacaactacataccctgcacc
ttggacccagtttttggaaagatgtatgaactgacatgctccctgcccctggagaaagac
ctaaggatcatgctgtatgactatgacatgctgtctaaagatgaaaagattggtgagacc
gtcattgacctggagaaccgcttcctgtcacgttacagtgcccgctgtggccttccccag
tcctactgtgtgtctggagtgaaccagtggcgagatcagctgaaacccacgcagctgctc
catcgtctctgtcagaggagaaactacaaactgcctgtctataagcacgacagagtgatt
tttagaggccatgagcacaccactgcagaccttgtagatgaggcaaagccagaaaaccct
cacctcgggccactggaggagcggctggctctgctggtgctgaggagacaaggccttgtg
gctgaacacgtggaaaccaggcctctatacagccccctgcagccagacatagaacaggga
cggttacagctttgggtggatcttttccctaaatctctgggccccccaggaccgcctttc
aacattactccacgcaaagcgaagaagttctttctacgctgcatcatatggaacacgagt
gatgtgatactcgatgatgtcagtgttacaggcgagaggatgagtgacatttatgtgaaa
ggatggatgcatggacatgaagggaacaagcagaagacggacgtgcattatcgctcgctg
ggtggcgagggtaactttaactggaggttcctctttcccttccattatttacctgctgaa
cagctctgtactgttgacaaaaaggagcacttctggagtttagataaggctgaaacgaag
gttcctcctaaactcaccgttcagatttgggacaatgacaagttctcctttgacgattac
cttggttgtttagaaatggatctgaaccacatgctgaagccagcgaagtctcctgagaaa
tgtggtctggagctgctctctcagccccaggacaagctggtgtctctgtttgaacaaaag
acagtcaaaggctggtggccttgtgtgtgtgacagacagggagagaagatcttagccggt
aaggttgagatgacactggagattgtgtcggagcaggaacaggaagagaggcctgcaggt
ctggggagagaagagcccaacatgaaccctcgtctggaggagccacagcgtcctgaaacc
tccttcctgtggttctcctctccttataaaaccctaaagttcatagtgtggagaagattt
aaatggttcattctgggactgatcattctcttcttcatcctgctcttcctgggagtcttt
ctctactccttccctaactatgctgctatgaagatggtgggccccttcagtggaatagga
aatggcaaacaataa
DBGET
integrated database retrieval system
