Pangasianodon hypophthalmus (striped catfish): 113542176
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Entry
113542176 CDS
T05759
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113542176 (btaf1)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113542176 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
113542176
NCBI-ProteinID:
XP_026795338
LinkDB
All DBs
Position
Unknown
AA seq
1860 aa
AA seq
DB search
MAVSRLERLFILLDTGTTPVTRKAAAQQLGDVVKLHPHELNNLLSKVLLYLRSPNWDTRI
AAGQAVEAIVKNIPEWNPAPKPKEESRAEDMSPEDSSSDRLSFYRFDISRLLRHGASLLG
SAGAEFEVQDDKSAEVDPKERLARQRKLLQKKLGLDMGAAIGMDTEELFNDEDLDYTCTS
NVNRSQPGKGAVFQSFRSHTPMQAAEFIDSEFRPGMSNRQKNKAKRMAKLVAKQRSRDMD
PNEKSNDSFEGEPEEKRRKTTNVVIEQPAAENKVLIDNIPDNSSLFEETQEWPLESFCEE
LCNDLFNPSWEVRHGAGTGLREVLKCHGAGGGKMVGSTSEQLAQQHQDWLEDLVIRLLCV
FALDRFGDFVSDEVVAPVRETCAQTLGVALRHMTECGVTMTVDVLLKLLTEDQWEVRHGG
LLGIKYALAVRQDLISQLLPRVLPAITEGLQDLDDDVRAVAAAALIPVVEGLVQLQPAKV
PFIVNTLWDALLELDDLTASTNSIMTLLSSLLTYPQVLQCSMQQSLTILVPRVWPFLRHT
IASVRRAALETLFTLLSKADQSCAMWLNPILQDMLRHIFQSCILESNQEILDLIQKVWGE
LLRQAPQQYVVAASCPWMGAWLCLMMQAPHIPIDLNMLLEVKARSKEKASGKSRQGGQQV
KETVQEYIGGADTITEDPASRDYVVTRARLMAAKLLGALCSCICDPRLNSSTQEIRPAES
LAQLLLFHLNSKSALQRIAVSMVLCEWASLQKECEVVSSVVQPRLLAILSEHLYYDEIAI
PFTRMQNECKQLIALLADAHIDVREKVNCSVFTIDQANELVTSIFSEATASLNLKSRQLQ
SLDSKRQQACSTVAETSTEWQQMHLRVHTFAACAVVGLAALPDKLNPLVRPLMEAIKKEE
NILVQGYAASSVARLLQLCTGRTPCPNSKIIKNLCSSVCVDPMLTPNAECPVPPHTPPTQ
DGCKANVSEKDGMHHMVNKTKGIITLYRHQRAAFAITSKRGPAPKLPKTSPNDLPPGSSI
STETDESKKPILIQRRGAEFSLMTIARHFGPGLTKALPCLWESMIGPLKALDTLGCDSRQ
LLEKGDLVAQELVNSLQVLEVTTGAVSQELISLLLEQLHLLCACLQHPYTAVRHMAARCI
GVFSKIATMETMNCFLEQVLPWLGAIDDSTKQEGAIEALACVMEQLDVDIVPYIVLLVVP
VLGRMSDPSDSVRFMATQCFATLIRLLPLEAGIPNPPTMSDDLIRQKARERHFLEQLLDS
RKLENYTIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHY
LRAQEYARTKAADCCPLPSIVVCPPTLTGHWVDEVGKFCTKEYLNPLHYTGPPTERARLQ
HQVKKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLSANYRVI
LSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAME
ALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKVNVDDVLST
AAQEDEEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEHKRISEQLSSQNSSLRDIQ
HAPKLSALKQLLLDCGLGSSGSSDVSTEAVVAQHRVLIFCQLKSMLDMVEHDLLKPQLPT
VTYLRLDGSVPAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPM
RDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQENASLQSMGT
EQLLNLFTLDKDDKAEKSEAASSSSGKASMKSVLDGLGELWDQQQYEAEYDLDTFMLSLH
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctcgaggcttgagcgtctgttcatcttattggacaccggcacaactcctgtg
acgaggaaagctgccgctcaacagctgggagacgtggtcaagctccatccgcatgagcta
aataatctgttatcaaaggttttattatatttgaggagtcccaactgggacacacgaatt
gcagctggtcaggcagtggaagccatagtgaaaaatattcccgaatggaacccagctccc
aagccaaaggaagagtcccgtgcagaagacatgtctcctgaggacagctcttcagataga
ctcagtttctacaggtttgacatttcccgtttgctcagacatggagcatcgctgcttggg
tctgctggtgcagagtttgaagtgcaggacgataagtcagctgaggtggaccccaaggaa
cgtctggcccggcagaggaagcttctgcagaagaagcttggtctggatatgggtgctgct
ataggcatggatacagaggagctgtttaatgatgaagacttggactacacctgtacctcc
aatgtaaataggtcacagcctggcaagggggctgtgttccagagtttccgcagccacaca
cctatgcaggcagcagagtttatagactccgaattccggcctggcatgagcaatcgccag
aagaacaaggctaaaaggatggccaagctggtggcaaagcagagatctagagatatggac
cccaatgaaaaaagcaacgacagcttcgaaggagagccagaagagaaacggcggaaaacc
acaaacgtagtcatcgagcagccggctgctgagaacaaagtcttaattgataacattcct
gacaactcaagtttatttgaggagactcaagaatggcccctggaaagtttctgcgaagag
ctttgtaatgacctgtttaatccatcctgggaggtgcggcacggtgcaggcacaggcctg
agagaggtgctgaagtgtcatggtgcaggaggagggaagatggtgggcagcacttcagaa
cagttggcccagcagcatcaagactggttggaggacttggtcatcaggcttctctgtgtc
tttgctctggaccgctttggagactttgtgtctgatgaagttgttgcaccagtcagagag
acttgtgcacagacactgggcgtggccttgaggcacatgactgaatgcggcgttaccatg
acagtggatgttttgttgaagctgcttacggaggatcagtgggaggttcggcatggagga
ctattgggcatcaaatacgcccttgctgtcagacaggatcttatttcacaactgcttcct
cgagtacttcctgccatcactgaaggtctccaggatctggatgatgatgtgcgtgcagta
gcagctgctgctcttatccctgtagtggagggactggtgcagctacagcctgctaaggtt
cctttcatagtgaacacactgtgggatgctctgctggagctcgatgacctcacagcttct
acaaacagcatcatgactttactatcgtccctgctcacataccctcaggtccttcagtgc
agcatgcagcagtcactgaccattttggttcctcgagtgtggccatttcttagacacacc
atcgcttctgttcgacgtgctgccttagaaacccttttcacgctgctgtccaaggctgat
cagagctgcgccatgtggctgaaccccatcctgcaagacatgctgaggcacatatttcag
tcctgcattctcgagagcaaccaggagatactcgatctcatccagaaggtgtggggcgag
ctgttacggcaggcccctcagcagtatgtggtggcagccagctgtccatggatgggtgcc
tggctctgtttgatgatgcaagcacctcacattcccattgacctcaacatgctattggag
gtcaaggctcgatccaaggagaaggcgagtggaaagtctcggcagggtggacagcaggtg
aaggagactgtgcaagagtacatcgggggagctgacactatcactgaggacccagcctcg
agagactatgtagtgactcgtgcccggctcatggctgccaaactgttgggggcactgtgc
agctgtatctgtgacccacgattaaacagctcgactcaagagattcggccagcggagtca
ttggctcagcttctcctcttccacctcaactcgaagtcggctctgcagcgtatcgctgta
tccatggtgctgtgtgagtgggcatctttacagaaggagtgcgaggtggtgtccagtgtg
gtccagcctcgtctgttggccatactgtctgaacatttatattatgatgaaatcgccatc
cccttcacacgcatgcagaatgaatgcaagcagctcatcgcgctccttgccgatgctcat
atcgacgtgagggagaaagtcaactgcagtgtcttcacaattgatcaggccaacgagctg
gtgaccagcatcttctctgaggccacagcttctttgaacctgaagtctcggcagctgcag
tcgttggacagtaagcggcagcaggcgtgctctacagtggctgagaccagtactgagtgg
cagcagatgcatctgcgcgtgcatacttttgcggcctgtgctgtggtaggcctggcggcg
ctgcctgacaagctcaacccgctggtgcgcccccttatggaggccattaagaaggaggag
aacatactggtgcagggatatgccgcctccagcgtagcccgcctgctgcagctctgcacg
ggccgaacgccctgccccaattcaaagatcattaaaaacctgtgcagctcggtgtgtgtg
gaccccatgctcacgccaaatgcagagtgccctgttccaccacacacacctccaacacag
gatggctgcaaagccaacgtgtctgagaaagacggcatgcaccacatggtgaataaaaca
aaaggcatcatcactctttaccgacatcagagagcagcttttgccatcaccagcaagaga
ggccccgcccccaaactgccaaaaacctcccccaatgaccttcccccaggcagctccatc
tccacagaaaccgatgagagtaagaagccgattctcatccagaggagaggtgcagagttc
tcactgatgactattgctaggcactttgggcctggtctcaccaaggcgttgccctgtctc
tgggagtctatgattggcccgctgaaggctctggacacactgggttgtgattccaggcag
ctcttggagaagggtgacttggtagctcaggagctggtcaactctctacaggtgttggag
gtcaccacaggagccgtgtctcaggagctcatatctctgctgttggagcagctgcatctg
ctgtgtgcgtgtctccagcacccgtacacggctgtgcgtcatatggccgctcgctgtatt
ggtgtgttcagcaagatcgccactatggaaaccatgaactgcttcctggagcaggttctg
ccatggttaggggcgattgatgacagcaccaaacaggagggagccatcgaggcattggcc
tgtgtgatggagcagctggatgtggacattgtaccctacattgtgctgttggtggtgcct
gtgctgggccgcatgagcgatcctagtgacagtgtgcgcttcatggccacacagtgtttt
gccactctcatacgcctgctgcctctggaggctggcatccccaacccacccaccatgtcc
gacgatctcattcgtcagaaggccagagagcgtcactttctggaacagctattggatagc
aggaagctggagaattacacgatccctgtccctattaaggcagaactcaggaaatatcag
caagatggagtgaactggttgtccttcttgaataagtacaagctgcatggaatcctgtgt
gatgacatgggtttaggtaaaacccttcaatccatctgcattcttgctggagaccactac
ctcagggcacaggagtatgccaggaccaaggctgcagactgttgtcctctgccctctata
gttgtgtgcccacctactctgacaggccactgggtggacgaggtgggcaaattctgcact
aaggagtacctgaatcctctccactacacgggtccccctacagagagagcacgattacag
caccaagtgaaaaagcacaaccttgtggtagcatcatatgatgtagtgcggaacgacatt
gacttttttaggaatattaaatttaattactgtatcctcgatgagggtcatgttattaaa
aatgggaagaccaaactatccaaagctatcaagcagctgtctgccaactacagagttatc
ctctcaggaacgccaattcagaataatgtcctggagctgtggtctctctttgacttcctg
atgccaggctttctgggtacggagcgccagtttgccgcccgttacgggaagcccatcctt
gctagccgagacgccaagagctcgtcccgagaacaggaagcaggggttttggctatggag
gctctgcatcggcaggtgctaccctttctcctgaggaggatgaaggaggatgtcctccaa
gatctgccacccaagattatacaagactactactgcaacctgagtcccctacaggttcag
ttgtacgaggactttgccaagtctcgggcaaaggtgaacgtggacgatgtcctctctacg
gcagctcaagaagatgaggaaaaacccaagctgaaggccaccggacatgtgttccaggca
ctgcagtacctgaggaagctgtgtaaccacccagcactggtcctgacgcctcagcatcct
gagcacaagcgcattagcgagcagctctcctcccagaattccagcctccgggacatccag
catgcaccaaaactctctgcacttaaacagttgctgttggactgtggactgggctcatcc
ggctcctcggacgtcagtacagaggctgtggtggctcaacaccgtgtgctgatcttctgc
cagctgaagagcatgttggacatggtggagcatgatctgctgaagcctcagctgccaaca
gtcacctatctgcgtctggacggcagtgtgcccgcaggcctgcgccattccatcgtctcc
aggttcaacaacgacccgtcgatagatgttctgctcctgacgacacacgtgggtggtctg
ggcttgaacctcacaggagccgataccgtggtgttcgtggaacatgactggaatccaatg
agagacctacaggctatggaccgcgctcatcgaataggacagaaacgtgtggtgaacgtg
tatcgtctgatcactcgtggcactctggaggagaagatcatgggtctgcagaagtttaag
atgagcatagctaacacagtgatcagccaggagaacgccagcctccagagcatgggcaca
gagcagctgttaaaccttttcactctggataaggatgataaggctgagaagagcgaagcg
gcgtcctcctcctcagggaaggccagtatgaagtccgtactggatggcctgggggagttg
tgggaccagcagcagtatgaagcggagtacgacctggatactttcatgctctcactgcac
taa
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