Pangasianodon hypophthalmus (striped catfish): 113543472
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Entry
113543472 CDS
T05759
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113543472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113543472
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113543472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
113543472
NCBI-ProteinID:
XP_026797502
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MSPADKRRLAFISLLAIVLFFLVLTCIPTYLYILFFFVVTCAVCYYKAEEFQLFERLGLN
PRRGLTVPTALRRWLPGRTFTGVPAAGRNKTRTNKSDVRNSLASPSDRSFASSVSRRDAT
FSDSVFSPRNILMGSYLGKAESPSGTGRPAGGSGCGGNPREQLRERLVRPNHGVPTPNRR
LSFGSDPVGAAGRFTITPQRHYPLQQIGSSPVGVFPPAQWDGFRKKNILTQRNTPIHSPV
TVKIARPDNTARFSFFDQVTSAGAVTSPGFEARADPCSRETVLSVLRASRKRDVDDDNDD
DERAHEAGQKSKRRRNDSSGSSQSVFEPLLANGAPSQLVPKPGSLKRGMNVSMLEESVVK
RSRTSSISSVSGCPVSCGVPGSARNPIRSSYSSSQGYSQRRLASNLSSSPLVSPGSSQSQ
TPERVAKKPREENATSPNSDSAINSDKTATETAPGSGKCTPMPDPPVTSRSDSGGNSGQR
KRKIQLVSMCKGDQISLPPPPELGYTITVKDLDMEKKAALTQIQKVLEEPEPEKPSHAPY
SSTPAAPSVGMFSQVVSFSSTSAAPVGTATSLASLSTPAAGLPPASTAVSTPAPAPTIDL
TVTPPSTVSAAPVQSAVLPTPTTSTTVATPVANPLLESLKSMKSSSLLSVPSTAAATSAA
PATTVAAQAPPSITPTALNFGAVKSEPSIATPQPTVSTAPSSVPSAFAQILAQPLPSSST
TLNLGGSSLFGLTTSTPAACAATAPTASAQPASSIANPTQSGFKPIFGPAMTTPVSAAEG
KPTQTTFKPIFGSVFNQPASSPSSVPATQSSTSVFGGVTNTQPMSSSVPSSVPSTQNPSQ
SVFGSQTNSQPVAASVSTSSTQKPIPALFGGLTNSQTVAASVSSSSSNTQNSTPSLFGGL
PNSQPMAASVLPSSSNTQNPAPSLFCGLTSSQPMAASISSSSSTQNSTTSLFGNWSAAKS
TFQFGGPSSTAASSGISTSTTTTNSTSTTLQFGALKPAPTALPAAPQNTFSFGQSPATTT
FTGFGMANNTTPMTSNTPATQATFGSSVFSASTCFANPQAQAQAPTPVKPFTFGASVGGG
TAVTPLTFGTPASTAAPTFGNSTQPAFGGASTGFAFGNTSALPVSTASMPAPAFTFGAAP
ATPQNTATPGGFNFTATLSGAQFGTPAPAGQNQGFAFGAGNTDNKSAFGTPSATFSIGAG
SKPSSSRQRLQARRQHTRKK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgcagataaacggcggctagcttttatctctctactcgctattgttctgttt
ttcctcgtgttgacttgcatacctacatatctgtacatacttttcttttttgtcgtaact
tgcgccgtttgttattataaagcagaggagtttcagcttttcgagaggttgggcctgaat
ccccgccgtgggctgacagttcctaccgcgctgcggcgctggttgccgggcaggactttc
acaggcgtcccggcggccgggcggaacaagactcggactaataaaagcgatgttagaaat
tctttagcgtctcccagcgataggagttttgccagttcggtttccaggcgagacgcaacg
ttcagcgactcagtgttcagtcctcggaacatcctcatggggagttacctgggtaaggca
gagagtccctccggcacagggcggcccgcgggaggctcaggctgtggcggcaaccccaga
gaacaactccgggagagactcgtccgacctaatcatggagtccccactccaaacagaaga
ttgtcttttggcagtgatccggtgggtgctgcagggaggttcaccatcacccctcagaga
cattacccactgcagcagataggatcctctccggtgggcgtatttcccccagcgcagtgg
gacggcttccgcaagaagaacattctgacacagcgcaatacacccatacacagtccagtt
acggtgaagatcgcaagaccggacaacacagcgcgcttttcattttttgatcaggtgacc
tccgctggagcagtcacatcccctgggttcgaagcccgagctgacccctgttctagagag
actgtactgagtgtgctcagagcaagccgtaagcgcgatgttgatgatgacaacgatgat
gatgagagagcccatgaagctgggcaaaagagcaaaaggaggcggaatgacagcagtgga
agttcccagtcagttttcgagccactgctagctaatggtgctccatcccagcttgtacca
aaacctggaagtttgaagagaggaatgaacgtctccatgttggaagagtccgtggtaaag
agatctcggacctcttccattagctctgttagtggttgtcctgtttcctgtggcgtgcct
ggatcagcccgcaaccctattcgtagctcttacagttcctcacagggctactctcagagg
agattagcttctaatctgagttcatctcctcttgtgagccctggatcatcacagtctcag
actcctgagagggtggccaaaaagcccagggaagaaaatgctacttcaccaaattctgat
tcggctattaactctgataagacagccactgagactgcccctggctctggtaaatgcacc
cctatgcctgatccccctgttacatcacggtcagactctggaggaaacagtggccaacgt
aaacgtaaaatccagctggtgtccatgtgcaaaggcgaccagatatctttgcccccgccc
cctgagctgggctatacaatcactgtgaaggacctggatatggagaaaaaagctgctctt
acccaaatccagaaagtccttgaggagcctgagccagagaagccaagccatgccccttat
tcatctactcctgctgctccctctgtaggcatgttttcccaggtagtttcattttcctca
acttcagctgcccctgtaggaactgctacttcactggcctccctgtccaccccagctgct
ggtcttccacctgcctccactgcagtttctaccccagctccagcaccaactattgacctc
acagttactccacccagcacagtcagtgctgcaccagtccagtctgcggtgctgcctaca
cctaccaccagcaccactgtagctacaccagtggctaatccactgctggagtctcttaag
agcatgaagagcagctctctactcagtgttccctctactgcagctgctacctctgcagct
ccagcaacaactgtggcagcccaggctcccccttccattacccccactgctttaaacttt
ggggctgtgaaatctgagccctccattgccactccacagcccacagtgtcaactgcacct
tcctcagtgccctctgcttttgcccagattctggctcagcctctgccatcctcatccacc
acactcaaccttggaggaagcagcctctttggcctcaccacttcgacacccgcagcttgt
gcagcaactgctcctacagcctctgcacagcctgctagcagtatagccaatccaacgcaa
tcagggttcaagcctatttttggaccagccatgacaacgccagtctctgctgcagagggc
aaacctacacaaaccactttcaagcccatttttggcagtgtgtttaatcagccggcttct
tcaccttcctctgtaccagcaactcagagtagcacatctgtatttggcggagtcactaac
actcagccgatgtcttcctctgtaccctcatcggtccccagtacacagaatcccagtcaa
tctgtgtttggcagtcagactaacagccaaccagtggcagcttctgtctccacctccagt
acccagaagcctattccagctctgtttggtggactgactaacagccaaacagtggctgct
tcagtttcatcctcctcctcgaacacccagaattctactccatctctttttggtggcctg
cctaacagccagccaatggctgcttcagttttgccatcctcctccaatacccagaatcct
gctccatctctgttttgtggactgaccagcagccaacctatggctgcttcaatctcatcc
tccagcagtacccagaattctacgacatctctgtttggtaactggagtgctgcaaagagc
acctttcagtttggaggtccatcatctacagctgcttcctctggaattagcactagtaca
acaactaccaacagcacctctacaaccttacagtttggtgctttaaaaccagcaccaact
gctctgcctgccgctcctcagaatacattcagctttggccaaagcccagccaccaccacc
tttacagggtttggtatggccaacaatactacccccatgacatcaaacaccccagcgacc
caggccacatttggtagctcggtattcagcgcctccacgtgctttgccaaccctcaagct
caagctcaagctcctactccagtcaagccttttacatttggtgccagtgttgggggaggt
acagcagtcacacccctcacattcggcacacccgctagcacagctgcaccaacgtttgga
aattctacacagcctgcatttggtggagcctccactggttttgcctttgggaacacaagt
gctttgccagtgagtactgcctctatgccagcccctgccttcacgtttggagcagcacca
gccacaccgcaaaacactgcaacacctggaggtttcaatttcacagcaacgctttctgga
gcacagtttggaacacctgccccagcagggcagaatcaggggttcgcatttggagcaggc
aacacggataataaatctgctttcggcactccttcagccactttttcaattggtgctggc
tcaaagcccagcagttcacgacaaagactacaggctcgcaggcagcacacaaggaagaag
taa
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