Pangasianodon hypophthalmus (striped catfish): 113546869
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Entry
113546869 CDS
T05759
Name
(RefSeq) LIM homeobox transcription factor 1-alpha-like isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113546869
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
113546869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
MRI
Atg2_N
DUF4611
Motif
Other DBs
NCBI-GeneID:
113546869
NCBI-ProteinID:
XP_026802775
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MGEGNLTTLLEGACSPVCEGCHQPIGERFLLRVHDSLWHERCVKCATCAEPLKSTCFVRD
SKIYCRRDYQQLFSVRCRACAEVISPAELVMRAGDAVFHLHCFCCSVCDCRLQKGDRCVL
VGDKLLCTQHYQHTLSSPTTTDSGRSEDEDDEEDESNLKVAGDRNPSRDGDHKRPKRPRT
ILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQ
QQCQSPQEHSDSKTHTSAPSVGFSAELESLSTYLSAAQQQETHSFKMDLRQGLTPPQMPG
DHMNPYDCTDAWYTDMDSDLLHPLRDCLSSGETSVLTPIDRLYSMQDSYFASCV
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaggcaatttaacaactttactggagggtgcatgcagtccggtgtgtgagggc
tgccaccagcccatcggtgagcggttcctgctgcgggtgcatgattctctgtggcatgag
cgctgtgtgaagtgtgctacttgtgctgagcctctgaagagcacctgcttcgtgcgagac
tccaagatctactgcagacgagattaccaacaactgttctcagtgcgctgtagggcttgt
gctgaggttatctccccggcagagctggtgatgcgagcgggtgatgcagttttccacctg
cactgtttctgctgctcagtgtgtgactgccggctgcagaaaggagatcgctgtgtgttg
gtgggagacaagctgctctgtacacaacattaccagcacacactgagcagtcccaccacc
acggactcaggccgaagtgaggacgaggatgatgaagaggatgaaagcaaccttaaggtg
gcaggagatagaaaccccagcagagacggggaccataagagaccgaaacggccacgcacc
atcctcaccacacagcagagacgagctttcaaagcctcatttgaagtttcatccaaacct
tgcagaaaagtaagggagaccttggcagctgagacgggcttgagcgtacgagtcgtccag
gtctggttccagaaccaaagagccaagatgaagaaattggccagacgacagcagcagcag
cagcagtgccagtcccctcaggagcacagtgacagcaaaacacacaccagtgcgccctct
gttggattttcagctgagctggagagcctgagcacatatttatctgcagctcaacagcag
gaaacccatagctttaagatggacctcagacaaggtctcacaccccctcagatgcctgga
gatcacatgaacccatatgattgtacagatgcctggtacactgacatggacagcgacctg
cttcacccactcagagactgtctgtcatctggggagacatctgttctgacaccgattgac
cgactatattctatgcaggactcttattttgcctcctgtgtgtaa
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