Pangasianodon hypophthalmus (striped catfish): 113546928
Help
Entry
113546928 CDS
T05759
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1
KO
K14946
RNA binding protein fox-1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113546928 (rbfox1)
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113546928 (rbfox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
113546928
NCBI-ProteinID:
XP_026802853
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MEEKGSKMVEEGNQDAPAPPEPMAQPYPSAQFAPPQNGLPTEYPASHPHPAPEYPGTSAV
PEHTLNMYPAAHTHSEPSAESSAHTVSGTATQTDDAAQTDSQQQTQSSESTENKTQPKRL
HVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFESSADADRAREKLHGT
VVEGRKIEVNNATARVMTNKKTVNPYANGWKLNPVVGAVYSPEFYAVPGFPYPAATAAAA
YRGAHLRGRGRTVYNTFRAAAPPPHIPAYGGVVYQDGFYGADIYGGYAAYRYAQPATAAA
AAYSDSYGRVYAADPYNHALAPAATYSVGAMXXFAPLTDAKTRSHADDVGLVLSSLQASI
YRGGYSRFAPY
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaagggagcaagatggtggaagagggtaatcaggacgcccccgccccaccg
gagcccatggcccagccgtacccctccgcccagttcgccccccctcagaacggcctgccc
accgagtacccggcgtctcaccctcaccccgcccccgagtacccgggcacgagcgccgta
cctgagcacacgctgaacatgtatcctgcagcgcacacacacagcgagcccagcgccgag
tccagcgcacacaccgtctccggcacagccacgcagacagacgacgcagcacagacagac
agccagcaacagacgcagtcctccgaaagcacggaaaacaagacgcagccgaagcgactc
cacgtctccaacattcccttcaggttcagagatccagacctcaggcaaatgttcggccaa
tttggtaaaatcttagatgttgagatcatttttaatgagcggggctctaagggttttggt
ttcgtaactttcgaaagtagtgctgatgcggacagggcgagggagaaattacacggcacg
gtggtagaaggccgtaaaatagaggtgaacaatgcaacagcacgagtaatgacaaacaaa
aagacagtcaacccatatgcaaacggctggaagttgaatcctgtggtaggtgcagtctac
agcccagaattctatgcagtgccaggcttcccgtacccagctgccacagcggctgcagcc
tacagaggggcgcacttaagagggagaggacgcacagtgtacaacacatttcgggcagca
gctcctccaccacacatcccagcatacggaggtgtcgtgtaccaggacggattttatggc
gcagatatttatggcggttacgctgcctaccgatacgcccagcctgccacagctgcagct
gccgcctacagtgacagttacggacgagtttatgctgccgacccctacaaccacgcactt
gctccagcagccacatacagcgttggtgccatgnnnnctttcgcaccgctgaccgacgcc
aagaccaggagccacgcggacgacgtgggtctcgttctttcttcgctgcaggctagtata
taccgaggcggatacagccgtttcgctccatactaa
DBGET
integrated database retrieval system
