Porphyrobacter sp. HT-58-2: CHX26_15505
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Entry
CHX26_15505 CDS
T05364
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
phz
Porphyrobacter sp. HT-58-2
Pathway
phz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHX26_15505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phz03400
]
CHX26_15505
Enzymes [BR:
phz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CHX26_15505
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CHX26_15505
DNA repair and recombination proteins [BR:
phz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHX26_15505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AUX70708
UniProt:
A0A2L0GNE9
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All DBs
Position
3277477..3278292
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AA seq
271 aa
AA seq
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MPELPEVETTVRGLAVFLEGERITRVQLNRPDLRRPFPADLVQVMTGATVSSLSRRAKYG
LMHLDRGATMIFHLGMSGRWRIDPETPDTHDHLLLETASHTFALCDPRRFGSVDLVGTDA
LDHWPQFAALGPEPLGPGLTAAHLKAALKGKTQSIKLCLLDQRIVAGLGNIYVCEALWRA
GIRPTKPAGKVTGPQLERLVPAIIAVLEASIRDGGSTLRDYARPDGELGYFASSFDVYGR
EGEACRRDDGGVIQRIVQGGRSTWYCPVCQK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaggtcgaaaccaccgttcgcggtcttgccgtcttcctcgaaggg
gagaggattacgcgcgtccagctgaaccggcccgacctgcgccggccctttccggccgat
ctggtgcaggtgatgaccggggcgacggtcagctccctgtcgcgccgcgccaagtatggt
ctgatgcaccttgatcgcggggcgacgatgatcttccatctcggcatgagcgggcgctgg
cggatcgatccggaaacccccgacacccacgatcacctcctgctcgaaaccgccagccac
acgtttgccctgtgcgatccgcgccgcttcggctcggtcgatctggtggggacggacgcg
ctggatcactggccgcaattcgccgcgctcggccctgagccgctggggccggggctgacg
gcggcgcatctcaaggccgcgctcaagggcaagacccagtcgatcaagctgtgcctgctc
gaccagcggatcgtggcgggcctcggcaatatctatgtctgcgaggcgctgtggcgcgcg
ggcatccggccgaccaagcccgccggcaaggtcacaggaccgcagcttgaacggctggtg
ccggcgatcatcgccgtactcgaagcgtcgatccgcgacggcggctcgaccttgcgcgac
tatgcgcggcccgatggggagctgggctattttgccagcagctttgatgtctacgggcgc
gaaggcgaggcctgccgccgggacgatggcggcgtgatccagaggatcgtgcaaggtgga
cgcagcacatggtattgcccggtttgccagaagtag
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