Paenibacillus ihbetae: BBD41_01250
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Entry
BBD41_01250 CDS
T05154
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pib
Paenibacillus ihbetae
Pathway
pib00300
Lysine biosynthesis
pib00550
Peptidoglycan biosynthesis
pib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBD41_01250
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BBD41_01250
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pib01011
]
BBD41_01250
Enzymes [BR:
pib01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BBD41_01250
Peptidoglycan biosynthesis and degradation proteins [BR:
pib01011
]
Precursor biosynthesis
Amino acid ligase
BBD41_01250
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
MoCF_biosynth
LpxD
PucR
Motif
Other DBs
NCBI-ProteinID:
ANY71321
UniProt:
A0A1B2DUF0
LinkDB
All DBs
Position
complement(297848..299344)
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AA seq
498 aa
AA seq
DB search
MKLTELIRPLTIAQIQGNADVEITGISMNSKFLQPGELFVCIPGIPGLQEDRHLYVEDAV
KAGAAAIVVERDVVSSVPTIKVPNARFALALLSAHFYGYPSHSLKLIGVTGTKGKTTTSY
MMESIFAHAGFRTGLMGNIGTKIGSTMHKTDINTQDPPHLQANLRKMKEESTDYCVMEVS
SQGLHMGRVLGCDFRTAVFTNLTHDHLDYHKTKENYLAAKGMLFSGLGNSYAPDPAKRKF
AILNADDEASRYLSEITAAQVITYGINTTANVIAKDIRLTPKGTTFTVESFAGDAEIELK
QVGMFNVYNALAAMTAALAEQVPFHVIQQGLHGLSNVSGRMEVIDEQQDFLVLVDYAHTP
DSLDNALSTLREFADQRIITVFGCGGDRDRTKRPVMGKLAAKHSDHVIITSDNPRTEDPL
GILKDIEHGVLEYGMSSESYEMIADRRQAIIRAVDMARSGDIVIIAGKGHETYQILNDQT
IHFDDREEAKAAIRNRNH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattaaccgagctgattcggcccttaaccattgcccaaatccaagggaatgctgac
gttgagattactgggatcagtatgaattcgaaattcttgcagcctggcgagctgtttgtt
tgtatacccgggattccgggcttacaggaagaccggcatctctacgtggaggatgccgtg
aaggcgggcgcagccgctatcgttgtcgaacgcgatgtggtatcgtctgtaccgacaatt
aaggtaccaaatgccagatttgcgctagccctgctgtctgcacatttttacgggtatccg
agccatagtctcaagctgatcggggtaacgggaacgaagggaaaaacgacgacaagctat
atgatggaatcgatttttgctcatgccggcttccggacgggattgatgggcaatatcggc
acgaagatcggttcgacgatgcataaaaccgacatcaacacccaggatcctccgcatctg
caagcgaatctacgcaagatgaaggaggaatcgaccgattattgcgtcatggaagtaagt
tcccaaggtctgcatatgggaagagtgctcggttgtgattttagaaccgctgtatttacg
aatttaacgcatgatcatctggactatcacaaaaccaaggaaaattatcttgcggcaaaa
ggaatgttgttctccggtttaggcaattcgtatgcgccggatcccgccaaacgaaaattt
gccattttgaacgcggatgacgaggcttcccgatatctaagcgagataaccgccgcacag
gttattacatacgggattaacaccactgcaaatgtcatcgctaaagatatccggctgacc
ccgaaaggaacgacattcacggtcgaatcgtttgcgggagatgccgagatcgagctgaag
caggtggggatgtttaatgtgtacaatgcccttgccgccatgactgcagcgcttgccgaa
caagttccatttcatgtcattcagcaagggctgcatggtttgagcaatgtttccggtcga
atggaggtcattgatgaacaacaggattttcttgtccttgttgactacgcccatactccg
gatagcttggacaatgcgctgtccaccttacgcgaatttgcagatcagaggatcatcacc
gtgttcggctgcggcggggacagggatcgaaccaaacgtcccgtgatggggaagttggcg
gccaagcacagtgatcatgtaatcatcacatcggataatccccgtacggaagatccgctc
ggaatcctgaaagatattgagcatggcgtgctggaatacgggatgtcgtctgaatcctat
gaaatgattgccgatcggcggcaagcgatcattcgggcagtggatatggcccgctccgga
gatatcgtcatcatcgcggggaaaggccatgaaacgtatcaaatcctgaacgatcagacg
atccatttcgatgaccgggaagaggccaaagcggcgattcgtaaccggaatcattag
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