Scheffersomyces stipitis: PICST_87539
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Entry
PICST_87539 CDS
T01023
Symbol
PRP5
Name
(RefSeq) pre-mRNA processing RNA-helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PICST_87539 (PRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pic03041
]
PICST_87539 (PRP5)
Enzymes [BR:
pic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PICST_87539 (PRP5)
Spliceosome [BR:
pic03041
]
Complex A
U2 snRNP components
U2 related factors
PICST_87539 (PRP5)
Complex B
PICST_87539 (PRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
4837624
NCBI-ProteinID:
XP_001382645
JGI:
87539
UniProt:
A3LQ55
LinkDB
All DBs
Position
2:2193221..2196041
Genome browser
AA seq
875 aa
AA seq
DB search
MDNTVTNDSDESKLSKEEKLKKRREQLALWRQKKEQDSKNGEKEMNSNATTSSDDKQKLR
QQRMEEWKKKRAQETKIDSKESVKESPKQENSILKRLASSIKKQELPFTKKRILFDEEEE
DESKRKPKFKKPTLDGHTEDLQHREDDPNGKIDELDDFIASLSKQESSSNDIPSQIIEDE
QLEVENEGDSEDEEIDQDKKQQELLSSKFQKLQNEKQLETIDHSTMNYSDFRKNFYQEPS
EIQNWTAEQVESIRLELDGIKVAGSNVPRPVLKWSHLGLPASYMNIIEDKLEYKAPTSIQ
SQALPAIMSGRDIIGVAKTGSGKTLSFVLPMLRHIQDQPDLKDGEGPIGLILSPTRELAV
QIHKEITNFTKRLGMTACCCYGGSPIESQIAELKKGAQILVGTPGRIIELLAANSGRITN
LRRVTYVVLDEADRMFDLGFEPQVTKISSQIRPESQTVLFSATFPRKIELLAKRLLYNPL
EIIVGGISVVASEITQKVELFEKGESSQLEDEKFDRLLNILNVFSIESKHSKVLIFVEKQ
SAADDLLVKLLGSNHPCLTIHGGKDQIDRKYAIKEFSSKDSGVDILIATSIAARGLDVKG
LDLVINYDPPNHMEDYVHRVGRTGRAGMKGTAITFVSSDQERSVTDLVRAMTMSKIPEDE
IPSRLIEIRNQFLEKVKAGKFKYSFGFGGKGLEKLQQIRDSTRSLQKKEYGPNDDDDVNF
VADKTNGTAKKDGATSLPASEVAVDLPDFQVIEGRAPETSGPDKSKFHSRITINDLPQRA
RWFVVNRDSLSKIIESTSTSITNKGQYYAPNVKVPQTVTVNGKESPAPPRLYLLVEGLTE
QSVREANSLIRDKMIEGLEVASKESNMAPTGKYKV
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggacaatacagttactaacgattcagatgaatccaagttatccaaagaagagaagttg
aagaaaagacgcgagcagcttgcgctttggcggcaaaaaaaggaacaagatctgaagaat
ggagaaaaagaaatgaattcaaatgcaacaacatcgtcagacgataaacagaaactcagg
caacaacgtatggaagaatggaagaagaaacgagcacaggagactaagatagattcgaag
gaatctgtaaaagagtcaccgaaacaagagaactcaatcttaaaaagattggcctctagc
atcaagaagcaggagcttccatttacaaagaaaagaatactattcgatgaagaagaggaa
gacgaatcgaagagaaaacctaaattcaagaagccaactttagatggtcatactgaagat
ttgcagcacagagaagatgaccccaatggaaaaatagacgaacttgatgattttatagct
tccctttcaaaacaggagtctagctccaacgacataccttctcaaataattgaagatgaa
cagttagaagtggaaaatgaaggtgactctgaagatgaagaaatagaccaagacaagaaa
cagcaggaattactctcttccaagttccagaaacttcagaatgagaaacagttagaaact
atagaccattctactatgaactactctgactttagaaagaatttctatcaagaaccaagt
gagattcaaaattggacagctgaacaagtggaaagtatcagactagaattggatgggata
aaggtggctggttcaaatgttcctagaccggttttgaaatggtctcatctaggattgcct
gcttcatatatgaatatcattgaagacaaacttgagtacaaggctcctacctcaattcaa
tctcaggctcttcctgctattatgtctggaagagacattattggtgtagccaaaactggc
tcgggcaagacgttatcttttgtacttccaatgttaaggcatatccaggatcaacctgat
ttaaaagatggtgagggtcctattggtttaatattgtctcctaccagagagctagcagtt
cagattcataaggagatcactaatttcacgaagagattgggaatgacagcttgctgttgt
tatggaggatctcctattgaatcacaaattgcggagctaaagaaaggggcacaaatattg
gtaggaacaccaggtagaatcatagaattactagctgctaatagtggcaggataacaaac
ttacgaagagtaacatacgttgtattggacgaagctgacagaatgttcgacttgggattt
gaacctcaagtgacaaagatatcgtcacagattcggcctgagagtcaaacagttcttttc
tcagctacgtttcccagaaaaatcgaattgctagccaaacgattactctataatccgtta
gaaattattgtgggaggtattagtgtcgtggcatctgagatcactcagaaagtggagcta
tttgagaagggcgagagtagccagctagaagatgagaagtttgacagactactcaatatt
ttgaatgttttctcgatagagtccaaacacagcaaagtattgatttttgtcgaaaaacag
tctgctgccgacgatttgctagtcaagttgttaggaagcaaccacccatgcctaacaata
catggaggtaaggatcaaattgatagaaagtatgctattaaagaattttcatccaaagat
agcggtgtagatattttgatcgcaacctccattgcagccagaggtcttgatgtcaaaggg
ttagatcttgtaatcaattacgatccacctaatcacatggaagattacgttcatcgtgtt
ggtagaactggtagagcaggtatgaaaggtacagctataacctttgtttcttcagatcaa
gaaagactggttacagatctagtcagggccatgacgatgagtaagatccctgaggatgag
attcccagcagattaatagagataaggaaccaattcttagaaaaagttaaggctggtaaa
tttaaatatagttttggattcggtggcaagggtttggaaaaattacagcaaatcagagac
tctactagaagcttacaaaagaaagaatatgggccaaatgacgacgatgatgtcaatttt
gttgcggacaaaaccaacggtactgctaaaaaagatggagctacttctttaccggctctg
gaggtcgccgtggatttgcctgacttccaggttattgaaggacgagcaccagaaacttct
ggtccagacaagagtaaattccattccagaatcaccatcaacgacttaccacaaagagct
cgttggtttgtggtcaatcgtgatagcttgtcgaagataattgagtctacatcgacatcg
ataacaaacaaaggtcaatactatgcacccaacgtcaaggttccacagaccgttacggtc
aatggaaaggaaagtccagctccaccaaggttgtacttgcttgtagaagggttaacagag
caatccgttcgcgaagctaactcattgattagagacaaaatgatagaaggattggaggta
gcttctaaggaactgaatatggcaccaacgggtaagtacaaagtatag
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