Phytophthora infestans: PITG_00863
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Entry
PITG_00863 CDS
T01333
Name
(RefSeq) DEAD/DEAH box RNA helicase, putative
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pif
Phytophthora infestans
Pathway
pif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PITG_00863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_00863
03036 Chromosome and associated proteins [BR:
pif03036
]
PITG_00863
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PITG_00863
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PITG_00863
mRNA degradation factors
5'-3' decay
Decapping complex
PITG_00863
Chromosome and associated proteins [BR:
pif03036
]
Eukaryotic type
Gene silencing
piRNA pathway
PITG_00863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF6610
ERCC3_RAD25_C
CMS1
AAA_30
DUF5541
Motif
Other DBs
NCBI-GeneID:
9472723
NCBI-ProteinID:
XP_002909411
UniProt:
D0MRV6
LinkDB
All DBs
AA seq
411 aa
AA seq
DB search
MTQQQSTNDEENWKASLKRPEKDTRVQTEDVTNVKGNEFEDYFLKRELLMGIFEKGFERP
SPIQEEAVPIILAGRNVMARAKNGTGKTAAFIIPCLEKTDTSKKHIQVLILVPTRELALQ
TSAIVKEIGKHMGIECMVSTGGTSLKDDIMRLYQTVHILVGTPGRVMDLANKGVADLSQC
STVIMDEADKLLSPEFQPLLEQLLNHTAKQRQICLFSATFPVTVKAFKDRFVENPYEINL
MDELTLKGVSQFYAFVEERQKVHCLNTLFSKLDINQSIIFCNSVNRVELLAKKVTELGYS
CFYIHAKMNQAHRNRVFHEFRNGATRHLVCSDLFTRGIDIQTVNVVINFDFPKNSETYLH
RIGRSGRYGHLGLAINMITYEDRFNLYRIEQELGTEIRPIPPVIDRNLYCK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcagcaatcgacgaacgacgaggagaactggaaggcctccctcaagcggccg
gagaaggacacgcgcgtgcagacggaagacgtgaccaacgtcaaaggcaacgagttcgag
gactatttcctcaagcgcgagctgctcatgggcatctttgaaaagggcttcgagcgcccg
tcccccatccaggaagaggccgtcccgattatcctcgcaggccgcaacgtcatggctcga
gccaagaacggcacgggcaagaccgccgcctttatcatcccgtgtctcgagaagacagac
acaagcaagaagcacattcaggtgctaatcctcgtccccacacgcgaattggctctccaa
acgtcggccattgtcaaggagatcggcaaacacatgggcatcgagtgcatggtgtccacg
ggcggcacgagtctcaaggacgacatcatgcgtctgtaccagacggtgcatattctagtg
ggcaccccaggtcgcgtcatggacctggctaacaagggcgtggccgacctcagccagtgc
tccactgtcatcatggacgaagccgacaagttgctgtccccagagttccagcctctactg
gagcaactactgaaccacacggccaagcagcgtcagatctgcctcttctcggccacattc
ccagtcacagtcaaggcgttcaaagaccgcttcgtggagaacccgtacgagatcaacctc
atggacgagctcacgttgaaaggagtgtcgcagttctacgccttcgtggaggagcggcag
aaggtgcactgtctcaacacgctcttctccaagctcgatatcaaccagtccatcatcttt
tgcaactcggtgaaccgcgtcgagttgttggccaagaaggttacggagctcgggtactcg
tgcttctacatccacgccaagatgaaccaggcgcatcggaaccgcgtgttccacgagttc
cgcaacggcgccacgcgacatttggtgtgttcggacttgttcacacgcggtatcgacatc
cagacggtgaacgtcgtgatcaactttgacttccccaagaactcggagacgtatctgcac
cgtatcggacgttccggacggtacggccacctcggtctggccatcaacatgatcacgtat
gaggaccgcttcaacttgtaccgcatcgaacaggagctgggcacggagatccgaccgatt
ccaccggttattgaccgcaacttgtactgcaagtaa
DBGET
integrated database retrieval system
