Phytophthora infestans: PITG_06827
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Entry
PITG_06827 CDS
T01333
Name
(RefSeq) DEAD/DEAH box RNA helicase, putative
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pif
Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pif03009
]
PITG_06827
03036 Chromosome and associated proteins [BR:
pif03036
]
PITG_06827
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PITG_06827
Ribosome biogenesis [BR:
pif03009
]
Eukaryotic type
Pre-60S particles
Helicases
PITG_06827
Chromosome and associated proteins [BR:
pif03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
PITG_06827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
AAA_22
Motif
Other DBs
NCBI-GeneID:
9463402
NCBI-ProteinID:
XP_002904811
UniProt:
D0N876
LinkDB
All DBs
AA seq
681 aa
AA seq
DB search
MASDEAKPVLTKEEKAAKKAAKLAKKLAKEQAKAEGSDSSVKKEKKQKKEKKEKKEKKSK
KRSREADEENNDTDPAEETGESEVEAPAAKKAKNENATHVGGEENPSLDNFRICDETKKN
LQARGIHTLFPIQAMTFDKIVDGKDLMGRARTGMGKTLAFALPVIELLLQDKRPRARGRA
PRVVCMAPTRELAKQVATEFELTGPSLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVI
DHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFTAMDQVKNESTGKRQTLLFSATI
PKWVKDVADKYMKKAEYVNLVKDSDDQASTDVQHIAIPCHWQGRPTLLANLLGVYAKKDS
RTIIFAETKKDCNELAVHPEIKTDCQVLHGDIAQEQRETTMKAFREGRLRLLIATDVAAR
GLDMNVDLVINSEPPRKMSGMADVDTYVHRSGRTGRAGKKGICITLYTNRQRDQLNQIER
KIGNKFIMKGPPDQEDLIKASAAKALKEIDNVDPSMIEIFQEKARELLETMEPEKCLAAA
LACITGHTKPPRRTSLMSGVPDYVTVLFTSSNFIRAKGYVWNAVNRDIPEEISKDIKQMT
LTEDAMGACFDLPIAGLELLETQMEESGMNCPYSIPKTLPKLQQSAYQMRPQSYGGRGGG
RGAGRGRGGRGRGGGGRGRRY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgacgaagcgaagcccgtgttgaccaaggaggagaaggcggctaagaaggcg
gctaagctggcgaagaaactggccaaggagcaggccaaggctgagggatccgactcgagc
gtcaagaaggagaaaaagcaaaagaaggagaaaaaggagaagaaagagaagaaaagcaaa
aagcgcagtcgtgaggctgacgaggagaacaacgataccgacccggctgaggagacgggc
gagagtgaagtggaggcacccgcggccaagaaggccaaaaacgagaatgccactcacgtg
ggtggcgaggagaacccgtcgctcgacaacttccgcatctgcgacgaaactaagaagaac
cttcaggcccgtggcatccacacgctcttcccaattcaggccatgaccttcgacaagatc
gtggacggtaaggacctcatgggccgcgctcgtacgggtatgggcaagactctggccttc
gcgctgccagtgattgagcttctacttcaagacaagcggccgcgcgcgcgtggtcgtgct
cctcgcgtggtatgcatggctcctacacgtgagctggccaaacaggtggccaccgagttc
gagttgacgggtccgtcgttgagtaccgtctgcatctatggtggagcttcctatcagtcg
cagaacaacgcgttccgtagcggtgtagacattctagtgggtacaactggccgcgttatt
gaccacattgaccgtggcaaccttcgtctgcacaactgcgagttcctcatccttgatgag
gccgatacgatgctggaaatgggattccgtgaggacgttcagaaggttttcacggccatg
gatcaggtcaagaacgagagcaccggtaaacgccagacgctgctgttctctgctacgatc
cccaagtgggtgaaggatgtggccgacaagtacatgaagaaggccgagtacgtcaacctg
gtcaaggactcggacgaccaggcgtctactgacgtgcagcacattgccatcccgtgtcac
tggcagggccggccgactttgctggccaacttgctcggtgtgtatgctaagaaggactct
cgtacgatcatcttcgctgagaccaagaaggattgcaacgagctagctgtacaccctgag
atcaagacggattgtcaggttctgcacggtgatatcgcccaggaacagcgtgagaccacc
atgaaggctttccgtgaaggccgtctgcgtctactcattgctacagatgtggccgcccgt
gggctggacatgaacgtggacctggtgatcaactcggagcctcctcgtaagatgtcgggt
atggccgacgttgacacgtacgtgcaccgttctggccgaacgggccgtgctggtaagaag
ggtatctgtattactctgtacacgaaccgccagcgtgatcagctcaaccagattgagcgc
aagattggcaacaagttcatcatgaagggtccacctgaccaggaggacttgatcaaggca
tcagctgcaaaggcgttgaaggagatcgacaatgtggacccgtccatgattgaaatcttc
caggagaaggcgagggagctgcttgagacgatggagccggagaagtgtctggccgctgcg
ttggcctgcattacgggccacacgaagcctcctcgtcgcacgtcgcttatgtctggtgtc
cctgactacgtgacggtgttgttcacaagctccaacttcatccgagccaagggctacgta
tggaacgctgtgaaccgcgacattccggaggaaatctcgaaggatatcaagcagatgact
ctgaccgaggacgcgatgggtgcgtgctttgacctgccgattgccggcctggaacttctg
gagacgcagatggaggaaagcggcatgaactgcccgtactcgatccccaagacgttgcca
aagctgcagcagtcagcgtaccagatgcgtccacagagctacggcggccgaggtggtggc
cgtggtgcaggtcgtggccgaggtggccgtggccgtggaggcggtggccgtggacgccgg
tactaa
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