Psychromonas ingrahamii: Ping_0998
Help
Entry
Ping_0998 CDS
T00450
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pin
Psychromonas ingrahamii
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pin03400
]
Ping_0998
Enzymes [BR:
pin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Ping_0998
DNA repair and recombination proteins [BR:
pin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Ping_0998
Prokaryotic type
Ping_0998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
SIP
Motif
Other DBs
NCBI-ProteinID:
ABM02837
UniProt:
A1STM2
LinkDB
All DBs
Position
1254979..1256340
Genome browser
AA seq
453 aa
AA seq
DB search
MHLVWFRNDLRTSDNSALYYACLKGPVTGIYFVTPGQWKNHQLAPIQADFIEQNLKVLAE
ELAALGIPLLIEEVADFSHIPARLKQIQKDHHINTIHANDEPEINEKERDQAVKKAGLPL
VLYQCDCILQAGSVLTKQGGMYKVFTAFRNAWMKEVKQTDLTPLPKPADQMPSLNVSWSK
NISVNYDKKSSQAWPAGETAALRRLRHFLLQDIEDYHHNRDIPSLDGTSGLSAYLKFGVI
SAKRCVYEVLAAFPDALDAQDSSVFSWINEIVWREFYRHLMIFNPQLCKGKNFNKLADNI
TWSNNPDDFKAWCEGRTGYGLVDAAMRQLNQTGWMHNRLRMVTASFLTKHLLIDWRWGEA
YFREHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPIIQSQKFDPKGLFIRKYVKELNG
FDNKKIHFPVNAIVEHKQARLNALDRYSVLKKG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcacttggtttggtttcgtaacgatttacgtacgtcagataattcagctttatattat
gcttgtttaaaaggcccggtaacaggcatttattttgttacccccgggcagtggaaaaat
caccaattagcgcctattcaagctgattttattgagcaaaatttaaaagttttagctgaa
gagttagcggcattaggtattcccttgttaatcgaagaagtcgctgacttttctcatatc
ccggcacgccttaagcagatccaaaaagatcaccatattaatactattcatgccaatgat
gagcccgaaattaatgaaaaagagcgcgatcaagcggtcaaaaaagccgggctgccttta
gtactttatcagtgtgactgtattttacaggcgggcagcgtacttacgaagcaaggtgga
atgtataaagtattcaccgcttttagaaatgcctggatgaaagaagtaaaacagacagat
ctcacgccattacccaaacctgctgatcagatgccctccttaaatgtgagttggtcgaaa
aatataagtgttaattatgacaaaaaatccagccaagcctggcctgcgggagagactgcc
gcgttgcggcgtttacggcattttttattacaggatatagaagattatcatcacaacaga
gatattccctctctcgatggcacatccgggttatctgcttatttaaaattcggcgttatc
agtgccaaacgttgtgtttatgaggtactggcggcttttcccgatgccttagatgctcag
gactcaagtgtctttagttggataaatgaaattgtttggcgtgaattttatcgccatcta
atgatctttaatccgcaattatgtaaagggaaaaatttcaataaactggcagataatatc
acttggagcaataaccccgatgactttaaagcctggtgtgaagggcggacagggtatgga
ttggtagatgctgcgatgcgtcagttaaatcaaactggctggatgcataaccgcttaaga
atggtaactgccagttttttaactaagcatttactgatcgattggcgttggggtgaggct
tatttcagggagcatttaatagacggtgatttggcatccaataacggtggctggcagtgg
gctgccagtacaggttgtgatgcacaaccctattttagaatttttaaccctattattcag
agtcaaaagtttgatccaaagggacttttcatccgtaaatacgtcaaagaactaaatgga
ttcgataataaaaaaattcattttccggtaaacgcaatagttgaacataaacaagcaaga
ttaaatgcgttagatagatattcagtattaaaaaagggttaa
DBGET
integrated database retrieval system
