Polynucleobacter ibericus: AOC20_01150
Help
Entry
AOC20_01150 CDS
T09789
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
piu
Polynucleobacter ibericus
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
piu03016
]
AOC20_01150
Enzymes [BR:
piu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AOC20_01150
Transfer RNA biogenesis [BR:
piu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AOC20_01150
BRITE hierarchy
Motif
Pfam:
RNB
L_lactis_ph-MCP
Motif
Other DBs
NCBI-ProteinID:
QWE08859
LinkDB
All DBs
Position
212652..214703
Genome browser
AA seq
683 aa
AA seq
DB search
MNLLYEEGGDIKIATVQSASGAGDAESWQATSLSGKKIKLKAKEVWLRFEKPEAQAAMDE
ANALTADIDLQFLWDCAPDEEFGLVDVAHEYFGSQASIAQQVALAIALQGAPVFFRRKGR
GRFQRAPIEQLQAGLAALERKQKELEQQSLWQQELVAGAFPEVLKSSAKQLLFSPDKNTS
AYKAFIAACTETGESPAQLMIRCGAIDSPLAYHQGMFLKAHFPNGADHNPAIGVDQAAYA
SALAELPLAQVKAFSIDDSGTTEIDDALSVTPIEGGYRIGIHIAAPGLAISKDDPLDQVA
RNRMSTVYFPGDKITMLPESVIKQFSLDEGKPRPALSIYVDIDADGIADRATLQMRTEMV
PMAANLRLEDIEHLVSEESLLDESASYPYRKELAILWLAAKLLHAGRQEKRIANGLRAEQ
LGLIDPNALARDFHFQIRAIDGVPRVEIIPRQRGSILDTIVAEWMIFCNSASGQLLADHG
LPGLFRTQKGWGPLRTRMQTTPGPHEGLGLDYYAWCTSPLRRYSDLVNQWQLIALAKHGV
TAKMVAPFPPRDATLMGIAADFESCYQAYGEFQDRLEKYWCLRWITQDGESKTVQVRHFK
EGMSRVELVPLHLPIPELATHPRMTRAEVVISDVDLLQLSAGVRVLEIEAKVEAPEKESA
DQAVESELEQEPSDKPEEDASPD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttatatgaagagggtggcgatattaagatcgccacagtccagtctgcttca
ggtgctggggatgcggagtcttggcaagccactagcctttctggaaaaaagatcaaactt
aaagctaaagaagtatggctgcgttttgaaaaaccagaagctcaagcggcaatggacgaa
gctaatgctctcaccgccgatattgatttgcagtttctttgggattgcgcaccagacgaa
gagtttggtctggtggatgtggcgcatgagtactttggctcacaagcaagtattgcccaa
caagttgcactagcgattgctttacaaggtgcaccagtattttttcgtcgcaaagggcgg
ggtcgttttcagagggcgccaatagagcagctgcaggctgggctagctgctttagaacgc
aagcaaaaagagctagagcaacaatcactttggcagcaagagctagttgctggcgccttt
cctgaggtattgaagtcttccgctaagcaattacttttttctccagataaaaatacttct
gcttacaaggcattcatcgccgcttgcactgagactggcgaatccccagctcaactcatg
attcgatgtggcgcaattgattcgcctctggcataccaccaggggatgtttttgaaggcg
cactttccgaatggtgcagatcacaatccggctatcggggtcgaccaagctgcttatgct
tctgctcttgccgagttgccgcttgcccaggtgaaggcattctccatcgatgattcgggt
acaactgaaattgatgacgccctctcagtcacgccaattgagggtggttatcgaataggt
attcacattgctgctccaggtttggctatttccaaagatgatccattggatcaagtggct
cgtaatcggatgtcgacagtgtattttccaggcgacaaaattacgatgttgcctgagtcg
gtgattaagcaattctcactggatgaaggtaaacctaggccggccttgtcgatttacgta
gatatcgatgcagatggtattgccgatcgagctactctgcagatgcgtacagagatggtg
ccaatggcagccaatttacgcctcgaggacattgagcatcttgtcagcgaggagagcttg
ctggatgaaagtgctagctacccgtatcgcaaagagctggcgattttgtggttggcggcc
aaacttcttcacgcgggtcgtcaagaaaagcgtattgcaaacggcctgcgtgctgagcaa
ttgggcctgattgaccctaatgcgttagcaagagactttcatttccagattcgcgctatt
gatggtgtgccacgtgttgaaatcatcccccgtcaacgtggatctattttggacaccatc
gttgctgaatggatgattttctgtaatagcgcttctggtcagcttctagctgaccatggt
cttccgggtttatttagaactcaaaagggctggggtcctttgcgtacccgaatgcaaact
acccctggcccacatgagggcttaggtttggactattacgcctggtgtacctcacccttg
cgccggtattccgatttagtgaatcaatggcaattaattgcacttgcaaagcatggcgtt
actgccaagatggttgcgccttttccaccgcgtgatgccacgttaatgggtattgctgct
gactttgagtcttgttatcaagcttatggcgagttccaggatagattggaaaagtattgg
tgcttacgttggattactcaagatggtgaatccaagacggttcaggttcgtcacttcaag
gaggggatgtctagagtggagttggtaccactgcatttaccgattcctgaattggcaacc
catccccgcatgactcgtgcagaggtcgtgatatcggatgtagatttattgcaacttagt
gcaggcgttcgagttctagaaattgaagcaaaggtggaggctcctgaaaaggagtcagcc
gaccaagccgtagagtcagagctagagcaagagccatcagacaaacctgaagaagatgct
agcccagattaa
DBGET
integrated database retrieval system
