Pseudomonas inefficax: RIN61_06410
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Entry
RIN61_06410 CDS
T09811
Symbol
ttgB
Name
(GenBank) multidrug efflux RND transporter permease subunit TtgB
KO
K18138
multidrug efflux pump
Organism
pix
Pseudomonas inefficax
Pathway
pix01501
beta-Lactam resistance
pix01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RIN61_06410 (ttgB)
01503 Cationic antimicrobial peptide (CAMP) resistance
RIN61_06410 (ttgB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_06410 (ttgB)
01504 Antimicrobial resistance genes [BR:
pix01504
]
RIN61_06410 (ttgB)
Transporters [BR:
pix02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RIN61_06410 (ttgB)
Antimicrobial resistance genes [BR:
pix01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RIN61_06410 (ttgB)
BRITE hierarchy
Motif
Pfam:
ACR_tran
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
WNN40936
LinkDB
All DBs
Position
1438325..1441477
Genome browser
AA seq
1050 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNPDTAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKAVKNFLLVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFGA
QYAMRIWLDPAKLNKFQLTPVDVKTAVAAQNVQVSSGQLGGLPAMPGTQLNATIIGKTRL
QTAEQFEKILLKVNSDGSQVRLGDVAQVGLGGENYAVSAQFNGKPASGLAVKLATGANAL
DTAKALRKTISDLEPFFPPGVKAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLFLQ
NFRATVITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEEGLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMGL
SVLVALIFTPALCATMLKPLKKGEHHVAKRGFFGWFNRNFDRSVTGYERSVGTILRNKAP
FLLAYALIVVGMIWLFARIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVVDQMREYLLS
EESDTVASVFTVNGFNFAGRGQSSGMAFIMLKPWDERSKENSVFALAQRAQQHFFTFRDA
MVFAFAPPAVLELGNATGFDVFLQDRGGVGHAKLMEARNQFLAKAAQSKILSAVRPNGLN
DEPQYQLTIDDERASALGVTIADINNTLSIALGASYVNDFIDRGRVKKVYIQGEPNARMS
PEDLQKWYVRNGAGEMVPFSSFAKGEWTYGSPKLSRYNGVEAMEILGAPAPGYSTGEAMA
EVERIAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPIAVV
LVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKELHEQGRSLYDA
AIEACRMRLRPIIMTSLAFILGVVPLTIASGAGAGSQHAIGTGVIGGMISATVLAIFWVP
LFFVAVSSLFGSKEPEKDVTPETPRYEAGQ
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagttctttatcgatcgcccgatcttcgcctgggtgatcgccttggtgatcatg
ctggtcggcgccttgtcgatcctgaagctgccgatcaaccagtaccccagcatcgcgccg
ccggccatcgccatcgccgtgacctatccgggcgcctcggcgcagaccgtgcaggacacc
gtggtacaggtgatcgagcagcagctcaacggtatcgacaacctgcgttatgtgtcatcg
gaaagcaactccgatggcagcatgaccattaccgccaccttcgagcagggcaccaacccg
gacaccgcacaggtgcaggtgcagaacaagctgaacctggccaccccgctgttgccgcag
gaagtgcagcaacaaggtatccgcgtcaccaaggcagtgaagaacttcctgctggtgatc
ggcctggtgtccgaagacggcagcatgaccaaggacgacctggccaactacatcgtctcc
aacatgcaggacccgatctcgcgcaccgcaggtgtgggtgacttccaggtattcggtgcg
cagtacgccatgcgtatctggctcgacccggccaagctgaacaagttccagctgaccccg
gtcgacgtcaagaccgccgtggccgcgcagaacgtgcaggtatcctccggccagctcggc
ggcctgccggccatgccgggtacccagctgaacgccaccatcatcggcaagacccgcctg
cagactgccgagcagttcgagaagatcctgctcaaggtcaacagcgatggttcgcaggtg
cgtctgggtgatgtcgcccaggttggcctgggtggtgaaaactatgccgtcagcgctcag
ttcaacggtaagccggcttccggccttgcagtaaaactggccaccggtgccaacgcactg
gacaccgccaaggccttgcgcaagaccatctccgacctggaaccgttcttcccgcctggg
gtgaaggcagtattcccgtatgacacgaccccggtggtcaccgaatcgatcagcggcgta
atccacaccctgatcgaagccgtggtcctggtgttcctggtgatgtacctgttcctgcag
aacttccgtgccaccgtcatcaccaccatgaccgtaccagtggtgttgctgggcaccttc
ggcatccttgccgcagcaggcttcagcatcaacaccctgaccatgttcgccatggtcctg
gccatcggcttgctggtggacgacgccatcgtcgtggtggagaacgtcgagcgggtgatg
tccgaggaaggcttgccgcccaaggaagcgaccaagcgctcgatggagcagatccagggt
gccctggtgggtatcgccctggtgctgtcggcggtactgctgcccatggcgttcttcggc
ggctccacgggtgtgatctaccggcagttctccatcaccatcgtctcggccatgggcctg
tcggtgctggtggcgctcatcttcaccccggccttgtgcgccaccatgctcaagccgctg
aagaagggcgagcaccatgtggccaagcgtggcttctttggctggttcaaccgcaacttc
gaccgcagcgtaaccggctacgagcgcagcgtgggtaccatcctgcgcaacaaggcaccg
ttcctgctggcctatgcgctgatcgtggtcggcatgatctggctgttcgcccgcatccca
accgcgttcctgccggaagaagaccagggcgtactgttcgcccaggtacagaccccagcc
ggctccagtgccgagcgcacccaggtagtggtagaccagatgcgtgagtacctgctcagc
gaagagtccgacaccgtggcttcggtgttcaccgtcaacggcttcaactttgccggtcgc
ggccagagttcgggcatggcgttcatcatgctcaagccgtgggacgagcgctccaaggaa
aacagcgtgttcgcccttgcccagcgagcccagcagcacttcttcaccttccgtgatgca
atggtgttcgcctttgccccgcctgcggtgctcgaactgggtaacgccaccggcttcgac
gtgttcctgcaggaccgcggcggtgtcggccatgccaagctgatggaagcgcgcaaccag
ttcctggccaaggccgcgcagagcaagatcctcagcgccgtgcgcccgaacggcctgaac
gatgagccgcagtaccagctgaccatcgatgacgagcgtgccagcgccctgggcgtgacc
atcgccgacatcaacaacaccctgtcgattgccctgggtgccagctacgtcaacgacttc
atcgaccgtggtcgggtcaagaaggtgtacatccagggcgagccgaacgcacggatgagc
ccggaagacctgcagaagtggtacgtgcgcaatggcgccggcgaaatggtgccgttctcc
tcattcgccaagggcgaatggacctacggttcgccgaagctgtcgcgttacaacggcgtc
gaggcgatggaaatcctcggtgctccggccccgggctacagtaccggtgaagccatggcc
gaggtcgagcgcattgctggcgaactgccaagcggcatcggcttctcctggaccggcatg
tcctacgaggaaaaactctccggttcgcagatgccggcactgtttgccctctcggtactg
ttcgtgttcctgtgcctggcagccctgtacgaaagctggtcgatcccgatcgccgtggtg
ctggtagtaccgctgggtatcatcggtgccctgatcgccaccagcctgcgcgggttgtcc
aacgatgtgtacttcctggtcggcctgttgaccaccatcggcctggcggcgaaaaacgcc
attctgatcgtcgagttcgccaaggagctgcacgagcaaggccgcagcctgtacgacgcg
gcgatcgaggcgtgccgcatgcgtctgcgcccgatcatcatgacctcgctggcgttcatc
ctcggcgtggtaccgttgactatcgccagcggcgccggcgccggcagccagcacgccatc
ggtactggcgtgatcggcggcatgatcagtgcgaccgtgctggctatcttctgggtacca
ctgttcttcgtcgcagtgtcgtcactgttcggcagcaaagagccggaaaaagacgtcacc
cctgaaactccacgttatgaggctgggcaatga
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integrated database retrieval system
