Pseudomonas izuensis: LAB08_R05410
Help
Entry
LAB08_R05410 CDS
T08555
Name
(GenBank) hypothetical protein
Organism
piz
Pseudomonas izuensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
DUF6543
LRR_8
LRR_4
Motif
Other DBs
NCBI-ProteinID:
BCX65934
LinkDB
All DBs
Position
615792..620984
Genome browser
AA seq
1730 aa
AA seq
DB search
MPNSNTSPSLSEGAFNSDLRGVHYDFLKDRIPAWFTAASARRQVEIGSHELQLPAWYRTA
TPEQKMALADSHTRYRETLNQIDAKLGSIKDIFDFAEQPLKDAIKAQFNLELDVRNLYFA
RKYGFKGRDDFFGFFVFDHQDSQSLRYEYRGISLLEAALANFEPDEEKPLHCNDCQVITG
WGSYDGEIIPTFEAINSQATPIAPHDFAKLCRTLDLGALYQKHIKDIVAPGKTEDRQALE
RELEEHLRQRLAVSTELAWLQFALKPGGSQVETGISQGVYQMLQKHLRSESSVTLDNRPV
TFASLKVFGIELVGPLLIGPNRKDAGRVERLAVYLPNDPQQPLREYASSAEFMADLRTRL
HSAAYRRFFSQFVPLRQQGIFFARFNKLYNPSGLDSQVDYPLQPRPGKLPLDETYVDGDL
WKQLRLNTIGKLYDDARAVAVPTGDEDRKAREERLASYLDAVNSVFNLAAFVVPGLGPVM
LAVGAAQMCDEVFEGMEAYEQGETKEMWAHFSSVALNVAFVGTGAAVLPKIQVSSVADSL
KPVTLVNGKQKLWKPDLSPYKASIKLAPEARPDELGLYPHNGQTVLPIEDAVYQVKQGAD
SNSYRIQHPTRPEAYAPELRHNGEGAWHHELERPQTWKGATLMRRLGPVVDGFSDTELEQ
IRRVSNVDDDVLRRVHAQGEPVPAILLDTLKKFRAHGDAVKVAEGIGKGSLSSALCSYAA
SLAVELPGWPPGKAIEAFAGETLSGDSVKYGNPDAKPQDTLKVSRSDLVRGRLPQHVIGF
LNEADIKQLQPNYTPRTPEERISALQKQLQEQAVSARGRLTRSLYTEEQSSADTAVAVVQ
RAFSRLSAAMVKELMADATPAELATLNTDRRIPLRLAEGARRLQQQLRLTQAYEGLHLDA
LVDKDSEILALNSLKNLPGWVNGIRLEVREGGLEGELRASYGAEDAPERKVLVRVGDGRY
EARNDRDEHLHGTDDLFGSIQHALPDRHRLSIGLPEVSQGALLKATVIEHQLPPDQLRPL
LKMQPRRQLFFKPPTRLSGERIGYPLSDHPRTSQWEQIAEERVRTLYPAMSSAEVTAFIE
SMGDRQETILRNREREFKQLNHTLQNWQRAQMDGVSAEERRTEDFARERHARLAIIKALK
QAWQRTGELDFDIHGQPLGQFLDLSNVDLEGQLAELPPLTANFDHVTHLDLSGAGIDVEV
DGFLRHFRRLRRLNLSNNGLFELPEPVDRMSNLTELDLSDNLIELDLPAVARLRGLTRLQ
FLGLEGNPLGLSPDVGQMPDLSMLLLGDTGLNAWPEGIFDQPRGRTFVLDLSANRLEQIP
QVASGSNEAELVARTIISPEPRYVSEQNLQIIRDYRQSIGLEPDRPYPPRGMLDSIHWKA
GLTDEQWLDKQNVWDSLEDESGSEPFFRELRKLAQSADALNPEEAAKAELCHKVWTMIEA
AAENSTLRTVLFRMATAPTTCVDAGAQLFNAMGLEVLIYQAYRLYAHDLIETALLELAQG
KSRLDELGRIARERIGVLLSEGHEFPQYDEQGMAIPRFDNQGQPVSNIDEVEIHMIYPTR
LAQRLDLPWQSREMRFQVPEVTSEMIERAHDRVLQKEQGAQLQQRIIEQPFWVDYLRRSS
PELFKALRDKGEIALDLQAAQQAWVDSDSAVHRIHWRSEVVRLAKLLGKPDSEIRPGTVM
SDAQYYAEMEAIAGQEQALISRLTTEAMQRARLPRAETPFKVEESPASRP
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgcccaactcaaatacttcgccttccctgtctgaaggcgcattcaatagcgaccttcga
ggcgttcactacgacttcctcaaggatcgcattcccgcttggttcaccgcggcctctgca
cggcggcaagtcgaaatcggcagccacgaattgcaactgcccgcctggtaccggacagcc
acacccgaacaaaagatggccctggccgacagtcacacgcgctatcgcgagaccttaaat
cagatcgacgccaaacttggcagcatcaaagacattttcgactttgccgagcagccgctc
aaagacgcaatcaaggcacagttcaacctggaactcgatgtccgaaatctttacttcgcg
cgtaaatacggtttcaaagggcgggacgatttttttggcttttttgtcttcgatcatcaa
gacagtcaaagcctgcgttacgaataccggggtatctcgttactcgaggcggccttggcc
aacttcgaaccagacgaagaaaagccgttgcactgcaacgattgtcaggtcattaccgga
tggggcagttacgacggcgaaatcatcccgacgttcgaagcaataaattcccaggccaca
cccatcgccccccatgactttgccaagctatgccgaactcttgatcttggagcgctgtat
cagaagcacatcaaggacattgtggcgccagggaagaccgaggatcggcaagcgctggag
cgggaactggaagaacatctgcggcaacggctggcggtgagcaccgaattggcctggctg
caatttgcactcaaaccgggcggcagtcaggtcgagacgggtatcagtcaaggcgtctat
cagatgcttcaaaaacatttgcgcagcgaaagcagcgtgacactggacaaccggccggta
acgttcgcctcattgaaggtgttcggtatcgagctggtgggcccattgctgatcgggccg
aaccgcaaggacgccggtcgggtcgagcgcctggcggtttacctgcccaacgatccgcaa
caaccattgagagaatatgcttcaagtgcagaattcatggcagacctgcggacccgtttg
cacagcgctgcctatcgccgcttcttcagccagttcgttcctctgcgacaacagggcatt
tttttcgcccgcttcaataagttgtacaacccgtccggtctcgattcccaggttgattat
ccactgcaacccaggcccgggaagctaccgctggacgaaacatacgttgatggcgatctg
tggaaacaactgcggctgaacaccatcggcaagctatatgacgatgcgcgagcggtggcc
gtacctaccggcgatgaagaccgcaaggctcgggaagaaagactggcaagctatctggat
gcagtgaacagtgtgttcaacctggccgcctttgtcgtgcccgggctggggccggtgatg
ctggcggtgggcgccgcgcaaatgtgcgatgaagtcttcgaaggcatggaagcgtacgag
cagggtgaaacaaaggagatgtgggcgcacttttccagcgtggcgctgaacgtggcgttt
gtcggcaccggcgcagcagtgttgcccaagattcaggtgtcgagcgtggcggattccctc
aaacccgttaccttggtcaacggcaagcaaaaactttggaaaccggacctttcgccttac
aaggcctccatcaagctggcacccgaggcccggccggatgaattgggtctctatccacac
aacgggcagacagttctgccaattgaagacgccgtctaccaagtcaaacagggtgcggac
agcaactcgtaccggattcaacacccgacccgtcccgaagcctacgcacctgaattgcgg
cataacggcgaaggcgcctggcaccacgagctcgagcgccctcagacctggaaaggcgcg
acactgatgcgcaggctcggtccggtggtggacggcttcagcgacactgagctggagcag
atccgacgggtaagtaacgtcgacgatgatgtcctgcgtcgtgtgcatgcacagggtgag
ccggtcccggcgattctgctcgacaccctcaagaagttccgtgcgcatggcgatgcggtg
aaggtcgccgaaggcatcggcaagggttcgctttccagcgcactgtgcagttacgccgct
tccctggccgtggaattgccgggctggccaccgggtaaggcgatagaagcttttgcgggt
gaaacgttgagcggggattcggtcaagtacggtaaccccgatgccaagccgcaagacacc
ctcaaagtctctcgctcggacctggtgcgcggccgattgcctcaacacgtcatcgggttc
ctgaatgaggcagatatcaagcagctgcagcccaactacacgcccagaacgccggaggaa
cgtatcagcgccttgcaaaagcagttgcaagagcaggcggtcagcgccagggggcgattg
acacgcagcctctacaccgaagagcagtcatctgcagacacggcggtggctgttgtacaa
cgtgcattcagtcgcttgtccgcagcgatggtcaaggaattgatggccgacgccaccccc
gccgagctagcgaccctgaacaccgacaggcgcattccgttacgcctggccgagggggcg
cgccggctgcagcagcaactgcgtctgacccaggcctacgaagggctacacctcgatgca
ctggtggacaaggacagcgaaatcctggcgctcaattcattgaaaaatctgcctggctgg
gtgaacggtatccgtctcgaagtacgggaaggcgggctggagggtgagctgcgcgccagt
tacggtgccgaggatgctcccgagcgcaaggtgttggtgcgggtgggtgacggtcgctat
gaggcacgcaatgaccgggacgaacacctgcacggtaccgacgatctctttggttcgatt
cagcatgccttgcccgatcggcatcgtttgtccatcggactgcccgaggtttcccagggc
gcactgttaaaggcgacagtcattgaacatcagttaccccctgatcaacttcgaccgctg
ctgaagatgcaaccgcgccggcaactgtttttcaaaccaccgacgcgtctgtccggcgag
cgcatcgggtaccccttgagcgatcacccccggacgagtcagtgggagcagatcgccgag
gagcgggtccggacactttatccggcgatgtcatccgcggaggtcacggcatttatcgag
agcatgggggaccggcaggaaacgatcctgaggaaccgcgaacgtgaattcaagcaactc
aatcacaccttgcaaaactggcagcgagcgcagatggacggggtgtctgccgaagagcgc
cggacagaggattttgcccgggagcgacacgcacggttggcaatcatcaaggctctcaag
caagcctggcaacgcacgggagagctggacttcgatatccacggccagcccctgggccaa
ttcttggatttatccaatgtggatcttgagggccagctcgctgagctgccgccgttgaca
gccaatttcgatcatgtgacccacctggatttgtcaggtgcgggtattgacgttgaggtg
gacgggtttttacgccatttccggcgcctgcgtcggttgaacctgagcaacaatggtttg
ttcgagttgcctgagcccgtggatcgtatgagcaacctgaccgaactggatctgtccgac
aacctgatcgaactggacctgccggcagttgcccgattgcgcggactgacacgtctgcag
ttcctcgggcttgaaggcaatcccttgggattgtcgcctgatgtaggacagatgccggac
ctgagtatgctgttgttgggcgataccggactgaatgcctggcctgaaggaatattcgat
cagcctcggggccggacgtttgtcctggatttgagtgccaacaggcttgagcagatcccg
caagtggcatccggatcgaatgaggccgagttggtggcgcgcacgatcatcagtcccgaa
cctcgctatgtttccgaacagaatctgcaaatcatcagggactatcgccagtcaatcggg
ctggaaccggatcggccctatccaccccgaggcatgctcgacagtattcattggaaagca
ggcctgactgacgagcaatggctggacaaacagaatgtgtgggacagtcttgaagatgag
tcagggtccgagccgttcttcagggaactgaggaaactcgcacagtccgcagacgccctc
aatcctgaagaagcagcaaaagcggagctgtgccacaaggtctggacaatgatcgaggcg
gctgccgaaaacagcacgcttcgcacagtactctttcgcatggccacggctccgacgacc
tgtgtcgatgccggcgcgcaactgttcaacgccatgggcctggaagtcttgatttatcag
gcgtatcggctgtatgcacacgatctgattgaaaccgcattactggagttggcccagggc
aagtcgcgcctggacgaactgggcaggattgcgcgcgagcgtattggcgtgctgttgagt
gaggggcacgaatttccccaatatgatgagcaaggtatggcaatacctcgtttcgataat
caggggcagcccgtttcgaatatcgatgaggtggagatccatatgatctaccccacgcga
ttggcgcagcgtctggatctgccgtggcagtcccgggagatgaggttccaggttcccgag
gtcacctccgagatgattgagcgcgcgcatgatcgggtactgcaaaaggaacagggtgcg
cagttgcagcagcgaatcatcgagcaacccttctgggttgactacctcaggcgatcgagc
ccggagcttttcaaagcgctgcgcgacaaaggcgagatcgcactggacttgcaggccgcg
caacaggcgtgggtcgacagcgattcagcggtgcacaggattcactggcgctcggaggtc
gtacggttggcgaaactgctcggcaagccggacagcgagatcaggcctggcacggtcatg
agtgacgcgcagtactacgctgagatggaagccatcgcagggcaagagcaggcactgatc
agtaggttgaccaccgaagccatgcagcgcgccagattgccgcgtgccgaaactccgttc
aaggtcgaggagagtcctgcctctcgaccttga
DBGET
integrated database retrieval system
