Penaeus japonicus (kuruma prawn): 122253353
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Entry
122253353 CDS
T07703
Name
(RefSeq) general transcription factor IIH subunit 2-like protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03022
Basal transcription factors
pja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122253353
09124 Replication and repair
03420 Nucleotide excision repair
122253353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122253353
03400 DNA repair and recombination proteins [BR:
pja03400
]
122253353
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122253353
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122253353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
122253353
NCBI-ProteinID:
XP_042872317
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MNDEDDPKEYRWQSGYEKTWEAIQEDDSGRLEPSVTDMIRRAKRRKLLDREASVRLGIMR
HVFIILDLSQAMAEQDLKPTRQICTLKILDEFIREFHDQNPISQLGIIATQNKVAKRHSD
LSNNPQRHLDCIKRLHELPCRGEPSMQNSLEFALSSLKHLPPHTSREILIIYAALTTCDP
GEIEATIQKVKDANIRVSVVGISAELHVCKMISKDTGGSFSVSINDLHLKELIFEHLEPP
PASVKMDHTLIKVGFPHQVNTDARPALCMCHLDDLPPLNTRGYYCPQCTAKYCDLPAECR
VCGLMLVTAPHLARSYRHLFPLKHFEEVPIEENQSYHCYGCLKHLTEAASEKNVYICRIC
KQVFCFECDIFLHETVHSCPGCASNPAISQYSST
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgaggatgatccgaaggaatatcggtggcagagtggctacgagaagacatgg
gaggcaatacaggaagacgactcagggcgactggagccctcagtcacagacatgataagg
cgagccaagcgccggaagctgctagatcgagaggcaagcgttcggcttggtattatgcga
catgtcttcatcatactggatctgtcgcaggcaatggcagagcaagacttgaaaccaaca
cgtcagatctgcacactaaagatattagatgaatttatccgggagttccatgatcaaaat
cccattagccagctgggcattattgcaactcagaacaaagtggccaagagacatagtgac
ctgagcaacaatccacagagacacttagattgtattaagcgtctccacgagcttccatgt
cgaggagaaccatcaatgcagaattccctagaatttgcactgtcatccttaaagcatctt
ccaccacacacatcaagggagattcttataatctatgctgcactaactacatgtgaccct
ggagaaatcgaggctaccatacagaaagtcaaagatgccaacatccgggtatcagtcgtc
ggcatttctgcagagttacacgtctgtaaaatgataagcaaggacactggtgggtctttc
tctgtctctatcaacgacctccacctgaaggagttgatctttgaacaccttgagcctccg
ccagcatccgtcaagatggaccacacattaattaaggtcggcttcccccatcaagtcaat
actgatgccaggcctgctctctgtatgtgtcacctcgatgatctacctcctctgaacacc
cgcggatactactgtccgcagtgcacagccaagtactgcgatcttcctgctgagtgccgt
gtttgtgggcttatgttggtcacagctccccatcttgctcggtcttacagacacttattc
ccgctgaagcattttgaagaagtacccatcgaggagaatcaaagctaccactgttacggc
tgcctgaagcacctgacagaggctgcgtctgaaaaaaatgtttacatctgccggatatgc
aagcaggtgttttgcttcgagtgcgatattttcctccacgagacggtccattcctgccca
ggttgtgcttcaaacccagcaatatctcagtactcttcaacctag
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